RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 MRC1P22897 1456 aa16.1■□□□□ 0.17
SFXN3-207ENST00000489434 STARD3NLO95772 234 aa16.09■□□□□ 0.17
SFXN3-207ENST00000489434 CHRNA5P30532 468 aa16.09■□□□□ 0.17
SFXN3-207ENST00000489434 IFFO2Q5TF58 517 aa16.09■□□□□ 0.17
SFXN3-207ENST00000489434 TTC5Q8N0Z6 440 aa16.09■□□□□ 0.17
SFXN3-207ENST00000489434 NMRK2Q9NPI5 230 aa16.09■□□□□ 0.17
SFXN3-207ENST00000489434 RNF181Q9P0P0 153 aa16.08■□□□□ 0.16
SFXN3-207ENST00000489434 COL15A1P39059 1388 aa16.08■□□□□ 0.16
SFXN3-207ENST00000489434 PER1O15534 1290 aaPredicted RBP16.07■□□□□ 0.16
SFXN3-207ENST00000489434 TEFQ10587 303 aa16.07■□□□□ 0.16
SFXN3-207ENST00000489434 ADAMTS7Q9UKP4 1686 aa16.06■□□□□ 0.16
SFXN3-207ENST00000489434 A0A087WZG4 1122 aa16.06■□□□□ 0.16
SFXN3-207ENST00000489434 U2SURPO15042 1029 aaKnown RBP16.06■□□□□ 0.16
SFXN3-207ENST00000489434 NFIXQ14938 502 aa16.06■□□□□ 0.16
SFXN3-207ENST00000489434 RBM46Q8TBY0 533 aaKnown RBP16.06■□□□□ 0.16
SFXN3-207ENST00000489434 ZBTB1Q9Y2K1 713 aa16.06■□□□□ 0.16
SFXN3-207ENST00000489434 KCPQ6ZWJ8 1503 aa16.05■□□□□ 0.16
SFXN3-207ENST00000489434 CANXP27824 592 aaKnown RBP16.05■□□□□ 0.16
SFXN3-207ENST00000489434 NPM2Q86SE8 214 aaKnown RBP16.05■□□□□ 0.16
SFXN3-207ENST00000489434 GAS2L2Q8NHY3 880 aa16.05■□□□□ 0.16
SFXN3-207ENST00000489434 TEX13AQ9BXU3 409 aaPredicted RBP16.05■□□□□ 0.16
SFXN3-207ENST00000489434 NPC1L1Q9UHC9 1359 aa16.04■□□□□ 0.16
SFXN3-207ENST00000489434 GNAT3A8MTJ3 354 aa16.04■□□□□ 0.16
SFXN3-207ENST00000489434 SERPINB2P05120 415 aa16.04■□□□□ 0.16
SFXN3-207ENST00000489434 AFDNP55196 1824 aaKnown RBP16.03■□□□□ 0.16
SFXN3-207ENST00000489434 ZC3H4Q9UPT8 1303 aaKnown RBP16.03■□□□□ 0.16
SFXN3-207ENST00000489434 H0YIN7 160 aa16.03■□□□□ 0.16
SFXN3-207ENST00000489434 FSTL1Q12841 308 aa16.03■□□□□ 0.16
SFXN3-207ENST00000489434 CNGB1Q14028 1251 aaPredicted RBP16.03■□□□□ 0.16
SFXN3-207ENST00000489434 TTLL6Q8N841 843 aa16.03■□□□□ 0.16
SFXN3-207ENST00000489434 SBF1O95248 1867 aa16.03■□□□□ 0.16
SFXN3-207ENST00000489434 UBR2Q8IWV8 1755 aa16.03■□□□□ 0.16
SFXN3-207ENST00000489434 LMNB1P20700 586 aa16.02■□□□□ 0.16
SFXN3-207ENST00000489434 C2CD5Q86YS7 1000 aa16.02■□□□□ 0.16
SFXN3-207ENST00000489434 CFAP53Q96M91 514 aa16.02■□□□□ 0.16
SFXN3-207ENST00000489434 EIF5P55010 431 aaKnown RBP16.01■□□□□ 0.15
SFXN3-207ENST00000489434 ZNF790Q6PG37 636 aa16.01■□□□□ 0.15
SFXN3-207ENST00000489434 BICDL1Q6ZP65 573 aa16.01■□□□□ 0.15
SFXN3-207ENST00000489434 BCL2L12Q9HB09 334 aa16.01■□□□□ 0.15
SFXN3-207ENST00000489434 PDZRN3Q9UPQ7 1066 aa16.01■□□□□ 0.15
SFXN3-207ENST00000489434 ZNF330Q9Y3S2 320 aaPredicted RBP16.01■□□□□ 0.15
SFXN3-207ENST00000489434 NRXN2Q9P2S2 1712 aa16■□□□□ 0.15
SFXN3-207ENST00000489434 TNRC6CQ9HCJ0 1690 aaKnown RBP16■□□□□ 0.15
SFXN3-207ENST00000489434 IL17REQ8NFR9 667 aa16■□□□□ 0.15
SFXN3-207ENST00000489434 ZNF496Q96IT1 587 aaPredicted RBP16■□□□□ 0.15
SFXN3-207ENST00000489434 FMNL2Q96PY5 1086 aa16■□□□□ 0.15
SFXN3-207ENST00000489434 RRAGCQ9HB90 399 aa16■□□□□ 0.15
SFXN3-207ENST00000489434 HEG1Q9ULI3 1381 aa16■□□□□ 0.15
SFXN3-207ENST00000489434 NPHP1O15259 732 aa15.99■□□□□ 0.15
SFXN3-207ENST00000489434 COL3A1P02461 1466 aaPredicted RBP15.98■□□□□ 0.15
SFXN3-207ENST00000489434 DLEC1Q9Y238 1755 aa15.98■□□□□ 0.15
SFXN3-207ENST00000489434 PDE6BP35913 854 aa15.98■□□□□ 0.15
SFXN3-207ENST00000489434 IL6STP40189 918 aaPredicted RBP15.98■□□□□ 0.15
SFXN3-207ENST00000489434 RASSF7Q02833 373 aa15.98■□□□□ 0.15
SFXN3-207ENST00000489434 DNAJC5GQ8N7S2 189 aa15.98■□□□□ 0.15
SFXN3-207ENST00000489434 SMC1BQ8NDV3 1235 aa15.98■□□□□ 0.15
SFXN3-207ENST00000489434 NUDCQ9Y266 331 aa15.98■□□□□ 0.15
SFXN3-207ENST00000489434 VEGFAP15692 232 aaPredicted RBP15.97■□□□□ 0.15
SFXN3-207ENST00000489434 BRIP1Q9BX63 1249 aa15.97■□□□□ 0.15
SFXN3-207ENST00000489434 CARMIL3Q8ND23 1372 aa15.97■□□□□ 0.15
SFXN3-207ENST00000489434 WDR90Q96KV7 1748 aa15.97■□□□□ 0.15
SFXN3-207ENST00000489434 GLTPD2A6NH11 291 aa15.96■□□□□ 0.15
SFXN3-207ENST00000489434 BTBD11A6QL63 1104 aa15.96■□□□□ 0.15
SFXN3-207ENST00000489434 TBC1D9BQ66K14 1250 aa15.96■□□□□ 0.15
SFXN3-207ENST00000489434 ZNF622Q969S3 477 aaKnown RBP eCLIP15.96■□□□□ 0.15
SFXN3-207ENST00000489434 SETDB2Q96T68 719 aa15.96■□□□□ 0.15
SFXN3-207ENST00000489434 TBC1D2BQ9UPU7 963 aa15.96■□□□□ 0.15
SFXN3-207ENST00000489434 SIPA1L3O60292 1781 aaPredicted RBP15.95■□□□□ 0.14
SFXN3-207ENST00000489434 PRKAR2BP31323 418 aa15.95■□□□□ 0.14
SFXN3-207ENST00000489434 CNBD1Q8NA66 436 aa15.95■□□□□ 0.14
SFXN3-207ENST00000489434 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
SFXN3-207ENST00000489434 ST5P78524 1137 aa15.94■□□□□ 0.14
SFXN3-207ENST00000489434 DPY19L2Q6NUT2 758 aa15.94■□□□□ 0.14
SFXN3-207ENST00000489434 KLRG1Q96E93 195 aa15.94■□□□□ 0.14
SFXN3-207ENST00000489434 CEMIPQ8WUJ3 1361 aa15.94■□□□□ 0.14
SFXN3-207ENST00000489434 CCDC88AQ3V6T2 1871 aa15.94■□□□□ 0.14
SFXN3-207ENST00000489434 SCN7AQ01118 1682 aa15.93■□□□□ 0.14
SFXN3-207ENST00000489434 A1BGP04217 495 aa15.93■□□□□ 0.14
SFXN3-207ENST00000489434 PRR5LQ6MZQ0 368 aa15.93■□□□□ 0.14
SFXN3-207ENST00000489434 PHACTR3Q96KR7 559 aa15.93■□□□□ 0.14
SFXN3-207ENST00000489434 NFKBIEO00221 500 aa15.92■□□□□ 0.14
SFXN3-207ENST00000489434 U2AF1L5P0DN76 240 aaPredicted RBP15.92■□□□□ 0.14
SFXN3-207ENST00000489434 U2AF1Q01081 240 aaKnown RBP eCLIP15.92■□□□□ 0.14
SFXN3-207ENST00000489434 DZIP3Q86Y13 1208 aaKnown RBP15.92■□□□□ 0.14
SFXN3-207ENST00000489434 CNKSR1Q969H4 720 aa15.92■□□□□ 0.14
SFXN3-207ENST00000489434 RSPH6AQ9H0K4 717 aa15.92■□□□□ 0.14
SFXN3-207ENST00000489434 ZNF652Q9Y2D9 606 aa15.92■□□□□ 0.14
SFXN3-207ENST00000489434 C21orf2O43822 256 aa15.91■□□□□ 0.14
SFXN3-207ENST00000489434 CAMTA2O94983 1202 aa15.91■□□□□ 0.14
SFXN3-207ENST00000489434 SNRPA1P09661 255 aaKnown RBP15.91■□□□□ 0.14
SFXN3-207ENST00000489434 ERFEQ4G0M1 354 aa15.91■□□□□ 0.14
SFXN3-207ENST00000489434 SOGA3Q5TF21 947 aa15.91■□□□□ 0.14
SFXN3-207ENST00000489434 ZNF219Q9P2Y4 722 aaPredicted RBP15.91■□□□□ 0.14
SFXN3-207ENST00000489434 TIAM2Q8IVF5 1701 aa15.91■□□□□ 0.14
SFXN3-207ENST00000489434 ANKRD31Q8N7Z5 1873 aa15.91■□□□□ 0.14
SFXN3-207ENST00000489434 HTRA3P83110 453 aa15.9■□□□□ 0.14
SFXN3-207ENST00000489434 STYK1Q6J9G0 422 aa15.9■□□□□ 0.14
SFXN3-207ENST00000489434 CLEC4GQ6UXB4 293 aa15.9■□□□□ 0.14
SFXN3-207ENST00000489434 CCDC24Q8N4L8 307 aa15.9■□□□□ 0.14
SFXN3-207ENST00000489434 KCNQ3O43525 872 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms