RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 TNS1Q9HBL0 1735 aaKnown RBP9.76□□□□□ -0.85
SCMH1-216ENST00000489421 LTN1O94822 1766 aa9.76□□□□□ -0.85
SCMH1-216ENST00000489421 TULP1O00294 542 aaPredicted RBP9.76□□□□□ -0.85
SCMH1-216ENST00000489421 ZNF772Q68DY9 489 aaPredicted RBP9.76□□□□□ -0.85
SCMH1-216ENST00000489421 PMFBP1Q8TBY8 1022 aa9.76□□□□□ -0.85
SCMH1-216ENST00000489421 IRX2Q9BZI1 471 aaPredicted RBP9.76□□□□□ -0.85
SCMH1-216ENST00000489421 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.76□□□□□ -0.85
SCMH1-216ENST00000489421 THSD7AQ9UPZ6 1657 aa9.76□□□□□ -0.85
SCMH1-216ENST00000489421 SBNO1A3KN83 1393 aa9.75□□□□□ -0.85
SCMH1-216ENST00000489421 SBF2Q86WG5 1849 aa9.75□□□□□ -0.85
SCMH1-216ENST00000489421 MAP2K5Q13163 448 aa9.75□□□□□ -0.85
SCMH1-216ENST00000489421 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.75□□□□□ -0.85
SCMH1-216ENST00000489421 KRT28Q7Z3Y7 464 aa9.75□□□□□ -0.85
SCMH1-216ENST00000489421 FNBP4Q8N3X1 1017 aaPredicted RBP9.75□□□□□ -0.85
SCMH1-216ENST00000489421 CDK19Q9BWU1 502 aa9.75□□□□□ -0.85
SCMH1-216ENST00000489421 DDX11L8A8MPP1 907 aa9.74□□□□□ -0.85
SCMH1-216ENST00000489421 WASLO00401 505 aaPredicted RBP9.74□□□□□ -0.85
SCMH1-216ENST00000489421 CABLES1Q8TDN4 633 aa9.74□□□□□ -0.85
SCMH1-216ENST00000489421 CARD14Q9BXL6 1004 aa9.74□□□□□ -0.85
SCMH1-216ENST00000489421 SLC12A5Q9H2X9 1139 aa9.74□□□□□ -0.85
SCMH1-216ENST00000489421 ATAD2Q6PL18 1390 aa9.74□□□□□ -0.85
SCMH1-216ENST00000489421 NINLQ9Y2I6 1382 aa9.74□□□□□ -0.85
SCMH1-216ENST00000489421 SRPK2P78362 688 aaKnown RBP9.73□□□□□ -0.85
SCMH1-216ENST00000489421 RDH13Q8NBN7 331 aa9.73□□□□□ -0.85
SCMH1-216ENST00000489421 NGLY1Q96IV0 654 aa9.73□□□□□ -0.85
SCMH1-216ENST00000489421 QTRT2Q9H974 415 aaKnown RBP9.73□□□□□ -0.85
SCMH1-216ENST00000489421 KTN1Q86UP2 1357 aaKnown RBP9.73□□□□□ -0.85
SCMH1-216ENST00000489421 NPC1L1Q9UHC9 1359 aa9.73□□□□□ -0.85
SCMH1-216ENST00000489421 IRF6O14896 467 aa9.72□□□□□ -0.85
SCMH1-216ENST00000489421 RXRBP28702 533 aa9.72□□□□□ -0.85
SCMH1-216ENST00000489421 MYT1Q01538 1121 aa9.72□□□□□ -0.85
SCMH1-216ENST00000489421 RALBP1Q15311 655 aa9.72□□□□□ -0.85
SCMH1-216ENST00000489421 PUS10Q3MIT2 529 aaKnown RBP9.72□□□□□ -0.85
SCMH1-216ENST00000489421 PRKD2Q9BZL6 878 aa9.72□□□□□ -0.85
SCMH1-216ENST00000489421 USP21Q9UK80 565 aa9.72□□□□□ -0.85
SCMH1-216ENST00000489421 KNSTRNQ9Y448 316 aa9.72□□□□□ -0.85
SCMH1-216ENST00000489421 POLR3AO14802 1390 aaPredicted RBP9.72□□□□□ -0.85
SCMH1-216ENST00000489421 RGPD1P0DJD0 1748 aa9.71□□□□□ -0.85
SCMH1-216ENST00000489421 RGPD2P0DJD1 1756 aa9.71□□□□□ -0.85
SCMH1-216ENST00000489421 TMC1Q8TDI8 760 aa9.71□□□□□ -0.86
SCMH1-216ENST00000489421 MYOM1P52179 1685 aa9.71□□□□□ -0.86
SCMH1-216ENST00000489421 PARP4Q9UKK3 1724 aaKnown RBP9.7□□□□□ -0.86
SCMH1-216ENST00000489421 RBM6P78332 1123 aaKnown RBP9.7□□□□□ -0.86
SCMH1-216ENST00000489421 LMOD2Q6P5Q4 547 aa9.7□□□□□ -0.86
SCMH1-216ENST00000489421 NUDT16Q96DE0 195 aaKnown RBP9.7□□□□□ -0.86
SCMH1-216ENST00000489421 ARHGEF10O15013 1369 aa9.7□□□□□ -0.86
SCMH1-216ENST00000489421 ANKRD36BQ8N2N9 1353 aa9.7□□□□□ -0.86
SCMH1-216ENST00000489421 PARD3Q8TEW0 1356 aa9.7□□□□□ -0.86
SCMH1-216ENST00000489421 SLIT3O75094 1523 aa9.7□□□□□ -0.86
SCMH1-216ENST00000489421 NR1I2O75469 434 aa9.69□□□□□ -0.86
SCMH1-216ENST00000489421 GGCXP38435 758 aa9.69□□□□□ -0.86
SCMH1-216ENST00000489421 PPIP5K1Q6PFW1 1433 aa9.69□□□□□ -0.86
SCMH1-216ENST00000489421 SCUBE3Q8IX30 993 aa9.69□□□□□ -0.86
SCMH1-216ENST00000489421 CCDC102AQ96A19 550 aa9.69□□□□□ -0.86
SCMH1-216ENST00000489421 TMUB1Q9BVT8 246 aa9.69□□□□□ -0.86
SCMH1-216ENST00000489421 CABP1Q9NZU7 370 aa9.69□□□□□ -0.86
SCMH1-216ENST00000489421 CAMTA1Q9Y6Y1 1673 aa9.68□□□□□ -0.86
SCMH1-216ENST00000489421 PLEKHG3A1L390 1219 aa9.68□□□□□ -0.86
SCMH1-216ENST00000489421 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
SCMH1-216ENST00000489421 S1PR4O95977 384 aa9.68□□□□□ -0.86
SCMH1-216ENST00000489421 GCGRP47871 477 aa9.68□□□□□ -0.86
SCMH1-216ENST00000489421 FUT2Q10981 343 aa9.68□□□□□ -0.86
SCMH1-216ENST00000489421 SULF1Q8IWU6 871 aa9.68□□□□□ -0.86
SCMH1-216ENST00000489421 TERF2IPQ9NYB0 399 aa9.68□□□□□ -0.86
SCMH1-216ENST00000489421 TRPC5Q9UL62 973 aaPredicted RBP9.68□□□□□ -0.86
SCMH1-216ENST00000489421 KIF20BQ96Q89 1820 aa9.68□□□□□ -0.86
SCMH1-216ENST00000489421 PEAK1Q9H792 1746 aa9.68□□□□□ -0.86
SCMH1-216ENST00000489421 LRRC37A3O60309 1634 aa9.67□□□□□ -0.86
SCMH1-216ENST00000489421 SSH2Q76I76 1423 aa9.67□□□□□ -0.86
SCMH1-216ENST00000489421 MYBBP1AQ9BQG0 1328 aaKnown RBP9.67□□□□□ -0.86
SCMH1-216ENST00000489421 ADH1BP00325 375 aa9.67□□□□□ -0.86
SCMH1-216ENST00000489421 PSME1Q06323 249 aa9.67□□□□□ -0.86
SCMH1-216ENST00000489421 EMID1Q96A84 441 aaPredicted RBP9.67□□□□□ -0.86
SCMH1-216ENST00000489421 V9GY48 417 aaPredicted RBP9.67□□□□□ -0.86
SCMH1-216ENST00000489421 RREB1Q92766 1687 aa9.67□□□□□ -0.86
SCMH1-216ENST00000489421 CD163L1Q9NR16 1453 aa9.66□□□□□ -0.86
SCMH1-216ENST00000489421 A0A1W2PP64 1363 aa9.66□□□□□ -0.86
SCMH1-216ENST00000489421 ACEP12821 1306 aa9.66□□□□□ -0.86
SCMH1-216ENST00000489421 FAM83GA6ND36 823 aa9.66□□□□□ -0.86
SCMH1-216ENST00000489421 PPEF1O14829 653 aaPredicted RBP9.66□□□□□ -0.86
SCMH1-216ENST00000489421 MDM2Q00987 491 aaPredicted RBP9.66□□□□□ -0.86
SCMH1-216ENST00000489421 CCDC184Q52MB2 194 aa9.66□□□□□ -0.86
SCMH1-216ENST00000489421 MORN1Q5T089 497 aa9.66□□□□□ -0.86
SCMH1-216ENST00000489421 CC2D1BQ5T0F9 858 aaKnown RBP9.66□□□□□ -0.86
SCMH1-216ENST00000489421 USP6P35125 1406 aa9.65□□□□□ -0.86
SCMH1-216ENST00000489421 CPSF1Q10570 1443 aaKnown RBP9.65□□□□□ -0.86
SCMH1-216ENST00000489421 NSD3Q9BZ95 1437 aa9.65□□□□□ -0.86
SCMH1-216ENST00000489421 NUP188Q5SRE5 1749 aa9.65□□□□□ -0.86
SCMH1-216ENST00000489421 HDGFL2Q7Z4V5 671 aaPredicted RBP9.65□□□□□ -0.86
SCMH1-216ENST00000489421 NLRP13Q86W25 1043 aa9.65□□□□□ -0.86
SCMH1-216ENST00000489421 UNC5CLQ8IV45 518 aa9.65□□□□□ -0.86
SCMH1-216ENST00000489421 GJD4Q96KN9 370 aaPredicted RBP9.65□□□□□ -0.86
SCMH1-216ENST00000489421 NFAT5O94916 1531 aa9.65□□□□□ -0.86
SCMH1-216ENST00000489421 SHANK3Q9BYB0 1731 aa9.65□□□□□ -0.87
SCMH1-216ENST00000489421 BRD4O60885 1362 aaPredicted RBP9.64□□□□□ -0.87
SCMH1-216ENST00000489421 CGNL1Q0VF96 1302 aa9.64□□□□□ -0.87
SCMH1-216ENST00000489421 CD46P15529 392 aa9.64□□□□□ -0.87
SCMH1-216ENST00000489421 ATP6V1AP38606 617 aa9.64□□□□□ -0.87
SCMH1-216ENST00000489421 NGDNQ8NEJ9 315 aaKnown RBP9.64□□□□□ -0.87
SCMH1-216ENST00000489421 NSD2O96028 1365 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms