RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
CSMD2-209ENST00000489419 AXIN2Q9Y2T1 843 aa10.88□□□□□ -0.67
CSMD2-209ENST00000489419 NPHP3Q7Z494 1330 aa10.88□□□□□ -0.67
CSMD2-209ENST00000489419 IBTKQ9P2D0 1353 aaPredicted RBP10.88□□□□□ -0.67
CSMD2-209ENST00000489419 RAB11FIP3O75154 756 aa10.88□□□□□ -0.67
CSMD2-209ENST00000489419 MPRIPQ6WCQ1 1025 aa10.88□□□□□ -0.67
CSMD2-209ENST00000489419 BCCIPQ9P287 314 aaKnown RBP eCLIP10.88□□□□□ -0.67
CSMD2-209ENST00000489419 STAP2Q9UGK3 403 aa10.88□□□□□ -0.67
CSMD2-209ENST00000489419 BRPF3Q9ULD4 1205 aa10.88□□□□□ -0.67
CSMD2-209ENST00000489419 SALL3Q9BXA9 1300 aa10.88□□□□□ -0.67
CSMD2-209ENST00000489419 SMARCA5O60264 1052 aaPredicted RBP10.87□□□□□ -0.67
CSMD2-209ENST00000489419 DNAAF4Q8WXU2 420 aa10.87□□□□□ -0.67
CSMD2-209ENST00000489419 USP26Q9BXU7 913 aa10.87□□□□□ -0.67
CSMD2-209ENST00000489419 PHAXQ9H814 394 aaKnown RBP10.87□□□□□ -0.67
CSMD2-209ENST00000489419 AOX1Q06278 1338 aa10.87□□□□□ -0.67
CSMD2-209ENST00000489419 GIGYF1O75420 1035 aaPredicted RBP10.87□□□□□ -0.67
CSMD2-209ENST00000489419 REC8O95072 547 aa10.87□□□□□ -0.67
CSMD2-209ENST00000489419 EIF2S2P20042 333 aaKnown RBP10.87□□□□□ -0.67
CSMD2-209ENST00000489419 OTUD7AQ8TE49 926 aaPredicted RBP10.87□□□□□ -0.67
CSMD2-209ENST00000489419 LRRFIP2Q9Y608 721 aaKnown RBP10.87□□□□□ -0.67
CSMD2-209ENST00000489419 ALDH1L1O75891 902 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 DDIT3P35638 169 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 POLA2Q14181 598 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 RABEP1Q15276 862 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 BEND3Q5T5X7 828 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 RAPGEF4Q8WZA2 1011 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 CHPF2Q9P2E5 772 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 PXDNQ92626 1479 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 PNMA6EA0A0J9YXQ4 647 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 KCNQ3O43525 872 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 FAM43AQ8N2R8 423 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 HYPKQ9NX55 129 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 FBXO3Q9UK99 471 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 SPG7Q9UQ90 795 aa10.86□□□□□ -0.67
CSMD2-209ENST00000489419 HSP90AB4PQ58FF6 505 aa10.85□□□□□ -0.67
CSMD2-209ENST00000489419 EXOC6BQ9Y2D4 811 aa10.85□□□□□ -0.67
CSMD2-209ENST00000489419 TNS3Q68CZ2 1445 aa10.85□□□□□ -0.67
CSMD2-209ENST00000489419 PI4KAP2A4QPH2 592 aa10.85□□□□□ -0.67
CSMD2-209ENST00000489419 ERC2O15083 957 aa10.85□□□□□ -0.67
CSMD2-209ENST00000489419 TATP17735 454 aaPredicted RBP10.85□□□□□ -0.67
CSMD2-209ENST00000489419 PI4KAP1Q8N8J0 262 aa10.85□□□□□ -0.67
CSMD2-209ENST00000489419 SIPA1L3O60292 1781 aaPredicted RBP10.85□□□□□ -0.67
CSMD2-209ENST00000489419 CPDO75976 1380 aa10.84□□□□□ -0.67
CSMD2-209ENST00000489419 K7ELQ4 463 aaPredicted RBP10.84□□□□□ -0.67
CSMD2-209ENST00000489419 APBB1O00213 710 aa10.84□□□□□ -0.67
CSMD2-209ENST00000489419 EPB41L2O43491 1005 aaKnown RBP10.84□□□□□ -0.67
CSMD2-209ENST00000489419 HSP90AB1P08238 724 aaKnown RBP10.84□□□□□ -0.67
CSMD2-209ENST00000489419 CHRM1P11229 460 aaPredicted RBP10.84□□□□□ -0.67
CSMD2-209ENST00000489419 MX1P20591 662 aa10.84□□□□□ -0.67
CSMD2-209ENST00000489419 ZC3H6P61129 1189 aaKnown RBP10.84□□□□□ -0.67
CSMD2-209ENST00000489419 KSR2Q6VAB6 950 aa10.84□□□□□ -0.67
CSMD2-209ENST00000489419 TEX2Q8IWB9 1127 aa10.84□□□□□ -0.67
CSMD2-209ENST00000489419 COL18A1P39060 1754 aa10.84□□□□□ -0.67
CSMD2-209ENST00000489419 MTX1Q13505 466 aa10.84□□□□□ -0.67
CSMD2-209ENST00000489419 ADCY9O60503 1353 aa10.83□□□□□ -0.68
CSMD2-209ENST00000489419 SPATA31A3Q5VYP0 1347 aa10.83□□□□□ -0.68
CSMD2-209ENST00000489419 STRCP1A6NGW2 1772 aa10.83□□□□□ -0.68
CSMD2-209ENST00000489419 DDX21Q9NR30 783 aaKnown RBP eCLIP10.83□□□□□ -0.68
CSMD2-209ENST00000489419 DDX58O95786 925 aaKnown RBP10.83□□□□□ -0.68
CSMD2-209ENST00000489419 MCM4P33991 863 aa10.83□□□□□ -0.68
CSMD2-209ENST00000489419 PPP1R42Q7Z4L9 355 aa10.83□□□□□ -0.68
CSMD2-209ENST00000489419 IFNL2Q8IZJ0 200 aa10.83□□□□□ -0.68
CSMD2-209ENST00000489419 KIF1BPQ96EK5 621 aa10.83□□□□□ -0.68
CSMD2-209ENST00000489419 NLRP2Q9NX02 1062 aa10.83□□□□□ -0.68
CSMD2-209ENST00000489419 RGPD5Q99666 1765 aa10.82□□□□□ -0.68
CSMD2-209ENST00000489419 HSP90B1P14625 803 aaKnown RBP10.82□□□□□ -0.68
CSMD2-209ENST00000489419 PHKG2P15735 406 aa10.82□□□□□ -0.68
CSMD2-209ENST00000489419 SLC52A2Q9HAB3 445 aa10.82□□□□□ -0.68
CSMD2-209ENST00000489419 ZNF790Q6PG37 636 aa10.82□□□□□ -0.68
CSMD2-209ENST00000489419 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.82□□□□□ -0.68
CSMD2-209ENST00000489419 SURF6O75683 361 aaKnown RBP10.81□□□□□ -0.68
CSMD2-209ENST00000489419 DCAF5Q96JK2 942 aa10.81□□□□□ -0.68
CSMD2-209ENST00000489419 CRYBG1Q9Y4K1 1723 aa10.81□□□□□ -0.68
CSMD2-209ENST00000489419 UTYO14607 1347 aa10.81□□□□□ -0.68
CSMD2-209ENST00000489419 SCN11AQ9UI33 1791 aa10.81□□□□□ -0.68
CSMD2-209ENST00000489419 SRGAP3O43295 1099 aa10.8□□□□□ -0.68
CSMD2-209ENST00000489419 NBPF7P0C2Y1 421 aaPredicted RBP10.8□□□□□ -0.68
CSMD2-209ENST00000489419 PTMSP20962 102 aa10.8□□□□□ -0.68
CSMD2-209ENST00000489419 SPRYD3Q8NCJ5 442 aa10.8□□□□□ -0.68
CSMD2-209ENST00000489419 LINS1Q8NG48 757 aa10.8□□□□□ -0.68
CSMD2-209ENST00000489419 RHPN1Q8TCX5 695 aa10.8□□□□□ -0.68
CSMD2-209ENST00000489419 MAP3K2Q9Y2U5 619 aa10.8□□□□□ -0.68
CSMD2-209ENST00000489419 DDX11L8A8MPP1 907 aa10.8□□□□□ -0.68
CSMD2-209ENST00000489419 IL17RAQ96F46 866 aa10.8□□□□□ -0.68
CSMD2-209ENST00000489419 KDM6AO15550 1401 aaPredicted RBP10.8□□□□□ -0.68
CSMD2-209ENST00000489419 TUBGCP6Q96RT7 1819 aa10.8□□□□□ -0.68
CSMD2-209ENST00000489419 ST18O60284 1047 aa10.79□□□□□ -0.68
CSMD2-209ENST00000489419 HSP90AA1P07900 732 aaKnown RBP10.79□□□□□ -0.68
CSMD2-209ENST00000489419 ANAPC15P60006 121 aa10.79□□□□□ -0.68
CSMD2-209ENST00000489419 SECISBP2LQ93073 1101 aaKnown RBP10.79□□□□□ -0.68
CSMD2-209ENST00000489419 ESYT1Q9BSJ8 1104 aa10.79□□□□□ -0.68
CSMD2-209ENST00000489419 C9orf78Q9NZ63 289 aaPredicted RBP10.79□□□□□ -0.68
CSMD2-209ENST00000489419 MRC1P22897 1456 aa10.79□□□□□ -0.68
CSMD2-209ENST00000489419 USP42Q9H9J4 1324 aaKnown RBP10.79□□□□□ -0.68
CSMD2-209ENST00000489419 CSB-PGBD3P0DP91 1061 aa10.79□□□□□ -0.68
CSMD2-209ENST00000489419 CHMLP26374 656 aa10.79□□□□□ -0.68
CSMD2-209ENST00000489419 RAB3GAP1Q15042 981 aa10.79□□□□□ -0.68
CSMD2-209ENST00000489419 LARP1Q6PKG0 1096 aaKnown RBP10.79□□□□□ -0.68
CSMD2-209ENST00000489419 ERC1Q8IUD2 1116 aa10.79□□□□□ -0.68
CSMD2-209ENST00000489419 RBM42Q9BTD8 480 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms