RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 UBAP1LF5GYI3 381 aa14.24□□□□□ -0.13
SMTN-218ENST00000489337 GCC1Q96CN9 775 aa14.24□□□□□ -0.13
SMTN-218ENST00000489337 CHAMP1Q96JM3 812 aa14.24□□□□□ -0.13
SMTN-218ENST00000489337 SLIT1O75093 1534 aa14.24□□□□□ -0.13
SMTN-218ENST00000489337 FGD1P98174 961 aa14.24□□□□□ -0.13
SMTN-218ENST00000489337 MYRIPQ8NFW9 859 aa14.24□□□□□ -0.13
SMTN-218ENST00000489337 TATP17735 454 aaPredicted RBP14.24□□□□□ -0.13
SMTN-218ENST00000489337 CCDC85AQ96PX6 553 aaPredicted RBP14.24□□□□□ -0.13
SMTN-218ENST00000489337 MEIS3Q99687 375 aa14.24□□□□□ -0.13
SMTN-218ENST00000489337 ZGPATQ8N5A5 531 aaKnown RBP14.23□□□□□ -0.13
SMTN-218ENST00000489337 CDC42BPGQ6DT37 1551 aa14.23□□□□□ -0.13
SMTN-218ENST00000489337 CYP2E1P05181 493 aaPredicted RBP14.23□□□□□ -0.13
SMTN-218ENST00000489337 CASC1Q6TDU7 716 aa14.23□□□□□ -0.13
SMTN-218ENST00000489337 CWC22Q9HCG8 908 aaKnown RBP14.23□□□□□ -0.13
SMTN-218ENST00000489337 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.23□□□□□ -0.13
SMTN-218ENST00000489337 SHPRHQ149N8 1683 aa14.23□□□□□ -0.13
SMTN-218ENST00000489337 MED14O60244 1454 aa14.23□□□□□ -0.13
SMTN-218ENST00000489337 LMTK3Q96Q04 1460 aa14.23□□□□□ -0.13
SMTN-218ENST00000489337 PNPLA6Q8IY17 1366 aa14.23□□□□□ -0.13
SMTN-218ENST00000489337 ACSBG1Q96GR2 724 aa14.23□□□□□ -0.13
SMTN-218ENST00000489337 CHPF2Q9P2E5 772 aa14.23□□□□□ -0.13
SMTN-218ENST00000489337 KCNQ4P56696 695 aa14.22□□□□□ -0.13
SMTN-218ENST00000489337 TAF7Q15545 349 aaPredicted RBP14.22□□□□□ -0.13
SMTN-218ENST00000489337 NCBP3Q53F19 620 aaKnown RBP14.22□□□□□ -0.13
SMTN-218ENST00000489337 OVOS2A0A0J9YW53 1432 aa14.22□□□□□ -0.13
SMTN-218ENST00000489337 OVOS2Q6IE36 1432 aa14.22□□□□□ -0.13
SMTN-218ENST00000489337 ST18O60284 1047 aa14.22□□□□□ -0.13
SMTN-218ENST00000489337 HMGN5P82970 282 aaKnown RBP14.22□□□□□ -0.13
SMTN-218ENST00000489337 MRPL50Q8N5N7 158 aaKnown RBP14.22□□□□□ -0.13
SMTN-218ENST00000489337 NSFL1CQ9UNZ2 370 aaKnown RBP14.22□□□□□ -0.13
SMTN-218ENST00000489337 IL16Q14005 1332 aa14.21□□□□□ -0.13
SMTN-218ENST00000489337 EP400Q96L91 3159 aa14.21□□□□□ -0.13
SMTN-218ENST00000489337 EXOC6BQ9Y2D4 811 aa14.21□□□□□ -0.13
SMTN-218ENST00000489337 C1orf167Q5SNV9 1468 aa14.21□□□□□ -0.13
SMTN-218ENST00000489337 CHMP3Q9Y3E7 222 aa14.21□□□□□ -0.13
SMTN-218ENST00000489337 PTCH1Q13635 1447 aa14.21□□□□□ -0.14
SMTN-218ENST00000489337 PPP4R3BQ5MIZ7 849 aa14.21□□□□□ -0.14
SMTN-218ENST00000489337 PROSER3Q2NL68 480 aa14.2□□□□□ -0.14
SMTN-218ENST00000489337 ALDH1L2Q3SY69 923 aa14.2□□□□□ -0.14
SMTN-218ENST00000489337 C16orf71Q8IYS4 520 aaPredicted RBP14.2□□□□□ -0.14
SMTN-218ENST00000489337 ZNF830Q96NB3 372 aaPredicted RBP14.2□□□□□ -0.14
SMTN-218ENST00000489337 MBD3O95983 291 aa14.2□□□□□ -0.14
SMTN-218ENST00000489337 TTC5Q8N0Z6 440 aa14.2□□□□□ -0.14
SMTN-218ENST00000489337 PRIMPOLQ96LW4 560 aa14.2□□□□□ -0.14
SMTN-218ENST00000489337 TSPY26PQ9H489 355 aa14.19□□□□□ -0.14
SMTN-218ENST00000489337 IGSF1Q8N6C5 1336 aa14.19□□□□□ -0.14
SMTN-218ENST00000489337 C8orf37Q96NL8 207 aa14.19□□□□□ -0.14
SMTN-218ENST00000489337 GTPBP4Q9BZE4 634 aaKnown RBP14.19□□□□□ -0.14
SMTN-218ENST00000489337 AATKQ6ZMQ8 1374 aa14.19□□□□□ -0.14
SMTN-218ENST00000489337 SETD1AO15047 1707 aaKnown RBP14.19□□□□□ -0.14
SMTN-218ENST00000489337 CHL1O00533 1208 aa14.19□□□□□ -0.14
SMTN-218ENST00000489337 KIF3AQ9Y496 699 aa14.19□□□□□ -0.14
SMTN-218ENST00000489337 ATP5J2-PTCD1G3V325 749 aa14.18□□□□□ -0.14
SMTN-218ENST00000489337 CABP4P57796 275 aa14.18□□□□□ -0.14
SMTN-218ENST00000489337 ZNF710Q8N1W2 664 aa14.18□□□□□ -0.14
SMTN-218ENST00000489337 API5Q9BZZ5 524 aaKnown RBP14.18□□□□□ -0.14
SMTN-218ENST00000489337 COL3A1P02461 1466 aaPredicted RBP14.18□□□□□ -0.14
SMTN-218ENST00000489337 PI4KAP2A4QPH2 592 aa14.18□□□□□ -0.14
SMTN-218ENST00000489337 OS9Q13438 667 aaPredicted RBP14.18□□□□□ -0.14
SMTN-218ENST00000489337 PI4KAP1Q8N8J0 262 aa14.18□□□□□ -0.14
SMTN-218ENST00000489337 IL1RAPL2Q9NP60 686 aa14.18□□□□□ -0.14
SMTN-218ENST00000489337 ZDHHC9Q9Y397 364 aa14.18□□□□□ -0.14
SMTN-218ENST00000489337 KIF20AO95235 890 aa14.18□□□□□ -0.14
SMTN-218ENST00000489337 FLIIQ13045 1269 aa14.18□□□□□ -0.14
SMTN-218ENST00000489337 NOLC1Q14978 699 aaKnown RBP eCLIP14.18□□□□□ -0.14
SMTN-218ENST00000489337 ERBB3P21860 1342 aa14.17□□□□□ -0.14
SMTN-218ENST00000489337 ZBTB7BO15156 539 aaPredicted RBP14.17□□□□□ -0.14
SMTN-218ENST00000489337 GSPT1P15170 499 aaKnown RBP14.17□□□□□ -0.14
SMTN-218ENST00000489337 PDE4CQ08493 712 aa14.17□□□□□ -0.14
SMTN-218ENST00000489337 USP26Q9BXU7 913 aa14.17□□□□□ -0.14
SMTN-218ENST00000489337 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
SMTN-218ENST00000489337 MAP4K4O95819 1239 aaPredicted RBP14.17□□□□□ -0.14
SMTN-218ENST00000489337 CWF19L2Q2TBE0 894 aaKnown RBP14.17□□□□□ -0.14
SMTN-218ENST00000489337 C17orf53Q8N3J3 647 aaPredicted RBP14.17□□□□□ -0.14
SMTN-218ENST00000489337 SIL1Q9H173 461 aa14.17□□□□□ -0.14
SMTN-218ENST00000489337 ATP2B3Q16720 1220 aa14.16□□□□□ -0.14
SMTN-218ENST00000489337 FOXD4L6Q3SYB3 417 aaPredicted RBP14.16□□□□□ -0.14
SMTN-218ENST00000489337 FOXD4L3Q6VB84 417 aaPredicted RBP14.16□□□□□ -0.14
SMTN-218ENST00000489337 SMIM5Q71RC9 77 aa14.16□□□□□ -0.14
SMTN-218ENST00000489337 BBXQ8WY36 941 aaPredicted RBP14.16□□□□□ -0.14
SMTN-218ENST00000489337 SYAP1Q96A49 352 aaPredicted RBP14.16□□□□□ -0.14
SMTN-218ENST00000489337 OTUD7AQ8TE49 926 aaPredicted RBP14.16□□□□□ -0.14
SMTN-218ENST00000489337 TTC12Q9H892 705 aaPredicted RBP14.16□□□□□ -0.14
SMTN-218ENST00000489337 INTS3Q68E01 1043 aaKnown RBP14.16□□□□□ -0.14
SMTN-218ENST00000489337 PIBF1Q8WXW3 757 aa14.16□□□□□ -0.14
SMTN-218ENST00000489337 PIK3R4Q99570 1358 aa14.15□□□□□ -0.14
SMTN-218ENST00000489337 CDK12Q9NYV4 1490 aaPredicted RBP14.15□□□□□ -0.14
SMTN-218ENST00000489337 LETM1O95202 739 aaPredicted RBP14.15□□□□□ -0.14
SMTN-218ENST00000489337 ITSN1Q15811 1721 aa14.15□□□□□ -0.14
SMTN-218ENST00000489337 CCDC30Q5VVM6 783 aa14.14□□□□□ -0.15
SMTN-218ENST00000489337 SIRT2Q8IXJ6 389 aa14.14□□□□□ -0.15
SMTN-218ENST00000489337 USP16Q9Y5T5 823 aa14.14□□□□□ -0.15
SMTN-218ENST00000489337 MAP3K5Q99683 1374 aa14.14□□□□□ -0.15
SMTN-218ENST00000489337 RNMTO43148 476 aaKnown RBP14.14□□□□□ -0.15
SMTN-218ENST00000489337 IGSF3O75054 1194 aa14.14□□□□□ -0.15
SMTN-218ENST00000489337 PLCB2Q00722 1185 aa14.14□□□□□ -0.15
SMTN-218ENST00000489337 TPRNQ4KMQ1 711 aa14.14□□□□□ -0.15
SMTN-218ENST00000489337 PDCL2Q8N4E4 241 aa14.14□□□□□ -0.15
SMTN-218ENST00000489337 USP25Q9UHP3 1055 aa14.14□□□□□ -0.15
SMTN-218ENST00000489337 RIC3Q7Z5B4 369 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms