RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 ARHGAP45Q92619 1136 aa11.23□□□□□ -0.61
EXOSC1-211ENST00000489158 PANK2Q9BZ23 570 aa11.23□□□□□ -0.61
EXOSC1-211ENST00000489158 NOB1Q9ULX3 412 aaKnown RBP11.23□□□□□ -0.61
EXOSC1-211ENST00000489158 EXOC5O00471 708 aa11.23□□□□□ -0.61
EXOSC1-211ENST00000489158 EIF4A1P60842 406 aaKnown RBP11.23□□□□□ -0.61
EXOSC1-211ENST00000489158 MEX3CQ5U5Q3 659 aaKnown RBP11.23□□□□□ -0.61
EXOSC1-211ENST00000489158 MRPL50Q8N5N7 158 aaKnown RBP11.23□□□□□ -0.61
EXOSC1-211ENST00000489158 UBR2Q8IWV8 1755 aa11.22□□□□□ -0.61
EXOSC1-211ENST00000489158 CABP4P57796 275 aa11.22□□□□□ -0.61
EXOSC1-211ENST00000489158 HEG1Q9ULI3 1381 aa11.22□□□□□ -0.61
EXOSC1-211ENST00000489158 ATF7IPQ6VMQ6 1270 aa11.21□□□□□ -0.61
EXOSC1-211ENST00000489158 NFATC2IPQ8NCF5 419 aa11.21□□□□□ -0.61
EXOSC1-211ENST00000489158 USP21Q9UK80 565 aa11.21□□□□□ -0.61
EXOSC1-211ENST00000489158 THSD7AQ9UPZ6 1657 aa11.21□□□□□ -0.61
EXOSC1-211ENST00000489158 LAMB4A4D0S4 1761 aa11.21□□□□□ -0.61
EXOSC1-211ENST00000489158 TRAK2O60296 914 aa11.21□□□□□ -0.62
EXOSC1-211ENST00000489158 TRIM27P14373 513 aa11.21□□□□□ -0.62
EXOSC1-211ENST00000489158 CCDC30Q5VVM6 783 aa11.21□□□□□ -0.62
EXOSC1-211ENST00000489158 DZIP1LQ8IYY4 767 aaKnown RBP11.21□□□□□ -0.62
EXOSC1-211ENST00000489158 NAP1L5Q96NT1 182 aaPredicted RBP11.21□□□□□ -0.62
EXOSC1-211ENST00000489158 C22orf23Q9BZE7 217 aa11.21□□□□□ -0.62
EXOSC1-211ENST00000489158 CHMP5Q9NZZ3 219 aa11.21□□□□□ -0.62
EXOSC1-211ENST00000489158 ITGB4P16144 1822 aa11.2□□□□□ -0.62
EXOSC1-211ENST00000489158 KCNQ3O43525 872 aa11.2□□□□□ -0.62
EXOSC1-211ENST00000489158 DDB1Q16531 1140 aa11.2□□□□□ -0.62
EXOSC1-211ENST00000489158 ZNF790Q6PG37 636 aa11.2□□□□□ -0.62
EXOSC1-211ENST00000489158 NECTIN2Q92692 538 aa11.2□□□□□ -0.62
EXOSC1-211ENST00000489158 STK31Q9BXU1 1019 aa11.2□□□□□ -0.62
EXOSC1-211ENST00000489158 PTPRCP08575 1304 aa11.2□□□□□ -0.62
EXOSC1-211ENST00000489158 MFAP1P55081 439 aaKnown RBP11.2□□□□□ -0.62
EXOSC1-211ENST00000489158 API5Q9BZZ5 524 aaKnown RBP11.2□□□□□ -0.62
EXOSC1-211ENST00000489158 DOT1LQ8TEK3 1739 aa11.19□□□□□ -0.62
EXOSC1-211ENST00000489158 ATRNO75882 1429 aa11.19□□□□□ -0.62
EXOSC1-211ENST00000489158 SLC4A2P04920 1241 aa11.19□□□□□ -0.62
EXOSC1-211ENST00000489158 EIF2S2P20042 333 aaKnown RBP11.19□□□□□ -0.62
EXOSC1-211ENST00000489158 CLCN1P35523 988 aa11.19□□□□□ -0.62
EXOSC1-211ENST00000489158 SLC39A6Q13433 755 aa11.19□□□□□ -0.62
EXOSC1-211ENST00000489158 TTC5Q8N0Z6 440 aa11.19□□□□□ -0.62
EXOSC1-211ENST00000489158 KAT6BQ8WYB5 2073 aa11.19□□□□□ -0.62
EXOSC1-211ENST00000489158 MVPQ14764 893 aaKnown RBP11.18□□□□□ -0.62
EXOSC1-211ENST00000489158 HDGFL1Q5TGJ6 251 aa11.18□□□□□ -0.62
EXOSC1-211ENST00000489158 AFF2P51816 1311 aa11.18□□□□□ -0.62
EXOSC1-211ENST00000489158 GLI3P10071 1580 aa11.18□□□□□ -0.62
EXOSC1-211ENST00000489158 C5P01031 1676 aa11.18□□□□□ -0.62
EXOSC1-211ENST00000489158 N4BP2Q86UW6 1770 aaPredicted RBP11.18□□□□□ -0.62
EXOSC1-211ENST00000489158 ITPRIPQ8IWB1 547 aa11.18□□□□□ -0.62
EXOSC1-211ENST00000489158 GIGYF1O75420 1035 aaPredicted RBP11.17□□□□□ -0.62
EXOSC1-211ENST00000489158 MRE11P49959 708 aa11.17□□□□□ -0.62
EXOSC1-211ENST00000489158 FMNL2Q96PY5 1086 aa11.17□□□□□ -0.62
EXOSC1-211ENST00000489158 CHMP4BQ9H444 224 aaKnown RBP11.17□□□□□ -0.62
EXOSC1-211ENST00000489158 TMOD3Q9NYL9 352 aa11.17□□□□□ -0.62
EXOSC1-211ENST00000489158 TRPC5Q9UL62 973 aaPredicted RBP11.17□□□□□ -0.62
EXOSC1-211ENST00000489158 KCPQ6ZWJ8 1503 aa11.17□□□□□ -0.62
EXOSC1-211ENST00000489158 A0A0G2JS52 829 aa11.17□□□□□ -0.62
EXOSC1-211ENST00000489158 ABCC4O15439 1325 aa11.16□□□□□ -0.62
EXOSC1-211ENST00000489158 TMEM57Q8N5G2 664 aa11.16□□□□□ -0.62
EXOSC1-211ENST00000489158 PXDNLA1KZ92 1463 aa11.16□□□□□ -0.62
EXOSC1-211ENST00000489158 BCL9O00512 1426 aa11.16□□□□□ -0.62
EXOSC1-211ENST00000489158 SOCS7O14512 581 aa11.15□□□□□ -0.62
EXOSC1-211ENST00000489158 SNRPA1P09661 255 aaKnown RBP11.15□□□□□ -0.62
EXOSC1-211ENST00000489158 HSCBQ8IWL3 235 aa11.15□□□□□ -0.62
EXOSC1-211ENST00000489158 GJD4Q96KN9 370 aaPredicted RBP11.15□□□□□ -0.62
EXOSC1-211ENST00000489158 GRPEL1Q9HAV7 217 aa11.15□□□□□ -0.62
EXOSC1-211ENST00000489158 DDX19BQ9UMR2 479 aa11.15□□□□□ -0.62
EXOSC1-211ENST00000489158 DDX11L8A8MPP1 907 aa11.15□□□□□ -0.62
EXOSC1-211ENST00000489158 FAM98CQ17RN3 349 aaKnown RBP11.15□□□□□ -0.62
EXOSC1-211ENST00000489158 DBF4Q9UBU7 674 aaPredicted RBP11.15□□□□□ -0.62
EXOSC1-211ENST00000489158 CICQ96RK0 1608 aaPredicted RBP11.14□□□□□ -0.63
EXOSC1-211ENST00000489158 ERBB4Q15303 1308 aa11.14□□□□□ -0.63
EXOSC1-211ENST00000489158 HSP90AA1P07900 732 aaKnown RBP11.14□□□□□ -0.63
EXOSC1-211ENST00000489158 SYTL4Q96C24 671 aaPredicted RBP11.14□□□□□ -0.63
EXOSC1-211ENST00000489158 ZNF496Q96IT1 587 aaPredicted RBP11.14□□□□□ -0.63
EXOSC1-211ENST00000489158 RGS12O14924 1447 aa11.14□□□□□ -0.63
EXOSC1-211ENST00000489158 PRAMEF22A3QJZ6 481 aa11.14□□□□□ -0.63
EXOSC1-211ENST00000489158 ONECUT3O60422 494 aaPredicted RBP11.14□□□□□ -0.63
EXOSC1-211ENST00000489158 FKBP5Q13451 457 aaPredicted RBP11.14□□□□□ -0.63
EXOSC1-211ENST00000489158 G2E3Q7L622 706 aa11.14□□□□□ -0.63
EXOSC1-211ENST00000489158 FLIIQ13045 1269 aa11.13□□□□□ -0.63
EXOSC1-211ENST00000489158 VSIG10Q8N0Z9 540 aa11.13□□□□□ -0.63
EXOSC1-211ENST00000489158 MARCH10Q8NA82 808 aaPredicted RBP11.13□□□□□ -0.63
EXOSC1-211ENST00000489158 CHPF2Q9P2E5 772 aa11.13□□□□□ -0.63
EXOSC1-211ENST00000489158 GLIPR1L2Q4G1C9 344 aa11.12□□□□□ -0.63
EXOSC1-211ENST00000489158 TEX13AQ9BXU3 409 aaPredicted RBP11.12□□□□□ -0.63
EXOSC1-211ENST00000489158 HYPKQ9NX55 129 aa11.12□□□□□ -0.63
EXOSC1-211ENST00000489158 ZNF831Q5JPB2 1677 aa11.12□□□□□ -0.63
EXOSC1-211ENST00000489158 NHSQ6T4R5 1651 aa11.12□□□□□ -0.63
EXOSC1-211ENST00000489158 HDAC1Q13547 482 aaPredicted RBP11.12□□□□□ -0.63
EXOSC1-211ENST00000489158 HSP90AA2PQ14568 343 aaPredicted RBP11.12□□□□□ -0.63
EXOSC1-211ENST00000489158 ZNF772Q68DY9 489 aaPredicted RBP11.12□□□□□ -0.63
EXOSC1-211ENST00000489158 INTS3Q68E01 1043 aaKnown RBP11.12□□□□□ -0.63
EXOSC1-211ENST00000489158 SLC4A10Q6U841 1118 aa11.12□□□□□ -0.63
EXOSC1-211ENST00000489158 PIGBQ92521 554 aa11.12□□□□□ -0.63
EXOSC1-211ENST00000489158 PHAXQ9H814 394 aaKnown RBP11.12□□□□□ -0.63
EXOSC1-211ENST00000489158 DDX21Q9NR30 783 aaKnown RBP eCLIP11.12□□□□□ -0.63
EXOSC1-211ENST00000489158 ESPNB1AK53 854 aa11.11□□□□□ -0.63
EXOSC1-211ENST00000489158 PTCD1O75127 700 aaKnown RBP11.11□□□□□ -0.63
EXOSC1-211ENST00000489158 ANXA1P04083 346 aa11.11□□□□□ -0.63
EXOSC1-211ENST00000489158 DDIT3P35638 169 aa11.11□□□□□ -0.63
EXOSC1-211ENST00000489158 F6X3S4 739 aa11.11□□□□□ -0.63
EXOSC1-211ENST00000489158 CCT4P50991 539 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms