RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 SSH1Q8WYL5 1049 aa8.41□□□□□ -1.06
HDLBP-243ENST00000488923 PHACTR3Q96KR7 559 aa8.41□□□□□ -1.06
HDLBP-243ENST00000488923 CHMP4AQ9BY43 222 aa8.41□□□□□ -1.06
HDLBP-243ENST00000488923 CHD2O14647 1828 aaKnown RBP8.4□□□□□ -1.06
HDLBP-243ENST00000488923 NCOA3Q9Y6Q9 1424 aa8.4□□□□□ -1.06
HDLBP-243ENST00000488923 IGSF1Q8N6C5 1336 aa8.4□□□□□ -1.06
HDLBP-243ENST00000488923 RTF1Q92541 710 aaKnown RBP8.4□□□□□ -1.06
HDLBP-243ENST00000488923 IPO9Q96P70 1041 aaKnown RBP8.4□□□□□ -1.06
HDLBP-243ENST00000488923 ANP32EQ9BTT0 268 aa8.4□□□□□ -1.06
HDLBP-243ENST00000488923 API5Q9BZZ5 524 aaKnown RBP8.4□□□□□ -1.06
HDLBP-243ENST00000488923 BABAM1Q9NWV8 329 aa8.4□□□□□ -1.06
HDLBP-243ENST00000488923 NWD1Q149M9 1564 aa8.39□□□□□ -1.07
HDLBP-243ENST00000488923 VAMP4O75379 141 aa8.39□□□□□ -1.07
HDLBP-243ENST00000488923 TRIM27P14373 513 aa8.39□□□□□ -1.07
HDLBP-243ENST00000488923 FBLN1P23142 703 aa8.39□□□□□ -1.07
HDLBP-243ENST00000488923 HDAC1Q13547 482 aaPredicted RBP8.39□□□□□ -1.07
HDLBP-243ENST00000488923 TWISTNBQ3B726 338 aaPredicted RBP8.39□□□□□ -1.07
HDLBP-243ENST00000488923 ABTB2Q8N961 1025 aa8.39□□□□□ -1.07
HDLBP-243ENST00000488923 BCL2L13Q9BXK5 485 aa8.39□□□□□ -1.07
HDLBP-243ENST00000488923 NOB1Q9ULX3 412 aaKnown RBP8.39□□□□□ -1.07
HDLBP-243ENST00000488923 LAS1LQ9Y4W2 734 aaKnown RBP8.39□□□□□ -1.07
HDLBP-243ENST00000488923 RGPD1P0DJD0 1748 aa8.38□□□□□ -1.07
HDLBP-243ENST00000488923 CHL1O00533 1208 aa8.38□□□□□ -1.07
HDLBP-243ENST00000488923 PSME1Q06323 249 aa8.38□□□□□ -1.07
HDLBP-243ENST00000488923 HSP90AB2PQ58FF8 381 aa8.38□□□□□ -1.07
HDLBP-243ENST00000488923 ITPRIPQ8IWB1 547 aa8.38□□□□□ -1.07
HDLBP-243ENST00000488923 MBIPQ9NS73 344 aa8.38□□□□□ -1.07
HDLBP-243ENST00000488923 PCDHGA10Q9Y5H3 936 aa8.38□□□□□ -1.07
HDLBP-243ENST00000488923 PIK3C2AO00443 1686 aa8.37□□□□□ -1.07
HDLBP-243ENST00000488923 ONECUT3O60422 494 aaPredicted RBP8.37□□□□□ -1.07
HDLBP-243ENST00000488923 EIF5BO60841 1220 aaKnown RBP8.37□□□□□ -1.07
HDLBP-243ENST00000488923 RLBP1P12271 317 aa8.37□□□□□ -1.07
HDLBP-243ENST00000488923 HOXC9P31274 260 aa8.37□□□□□ -1.07
HDLBP-243ENST00000488923 C14orf37Q86TY3 774 aa8.37□□□□□ -1.07
HDLBP-243ENST00000488923 VSIG10Q8N0Z9 540 aa8.37□□□□□ -1.07
HDLBP-243ENST00000488923 RYDENQ9NUL5 291 aaKnown RBP8.37□□□□□ -1.07
HDLBP-243ENST00000488923 NOP58Q9Y2X3 529 aaKnown RBP8.37□□□□□ -1.07
HDLBP-243ENST00000488923 DCCP43146 1447 aa8.37□□□□□ -1.07
HDLBP-243ENST00000488923 PTPRCP08575 1304 aa8.36□□□□□ -1.07
HDLBP-243ENST00000488923 NRG2O14511 850 aaPredicted RBP8.36□□□□□ -1.07
HDLBP-243ENST00000488923 IGHDP01880 384 aa8.36□□□□□ -1.07
HDLBP-243ENST00000488923 TPRNQ4KMQ1 711 aa8.36□□□□□ -1.07
HDLBP-243ENST00000488923 IP6K1Q92551 441 aa8.36□□□□□ -1.07
HDLBP-243ENST00000488923 ZFRQ96KR1 1074 aaKnown RBP8.36□□□□□ -1.07
HDLBP-243ENST00000488923 C19orf44Q9H6X5 657 aa8.36□□□□□ -1.07
HDLBP-243ENST00000488923 UPF2Q9HAU5 1272 aaKnown RBP8.36□□□□□ -1.07
HDLBP-243ENST00000488923 ZBTB40Q9NUA8 1239 aa8.36□□□□□ -1.07
HDLBP-243ENST00000488923 WBP1LQ9NX94 342 aa8.36□□□□□ -1.07
HDLBP-243ENST00000488923 PEAK1Q9H792 1746 aa8.35□□□□□ -1.07
HDLBP-243ENST00000488923 ESCO1Q5FWF5 840 aa8.35□□□□□ -1.07
HDLBP-243ENST00000488923 AEBP1Q8IUX7 1158 aa8.35□□□□□ -1.07
HDLBP-243ENST00000488923 TMEM57Q8N5G2 664 aa8.35□□□□□ -1.07
HDLBP-243ENST00000488923 GCC1Q96CN9 775 aa8.35□□□□□ -1.07
HDLBP-243ENST00000488923 EYA1Q99502 592 aa8.35□□□□□ -1.07
HDLBP-243ENST00000488923 EMILIN3Q9NT22 766 aa8.35□□□□□ -1.07
HDLBP-243ENST00000488923 PCDHB15Q9Y5E8 787 aa8.35□□□□□ -1.07
HDLBP-243ENST00000488923 MST1RQ04912 1400 aa8.35□□□□□ -1.07
HDLBP-243ENST00000488923 ABCC4O15439 1325 aa8.34□□□□□ -1.07
HDLBP-243ENST00000488923 KIF1AQ12756 1690 aa8.34□□□□□ -1.07
HDLBP-243ENST00000488923 GNAT3A8MTJ3 354 aa8.34□□□□□ -1.07
HDLBP-243ENST00000488923 RGS3P49796 1198 aa8.34□□□□□ -1.07
HDLBP-243ENST00000488923 PROSER2Q86WR7 435 aaPredicted RBP8.34□□□□□ -1.07
HDLBP-243ENST00000488923 SMC5Q8IY18 1101 aa8.34□□□□□ -1.07
HDLBP-243ENST00000488923 FBXW7Q969H0 707 aa8.34□□□□□ -1.07
HDLBP-243ENST00000488923 THUMPD2Q9BTF0 503 aaKnown RBP8.34□□□□□ -1.07
HDLBP-243ENST00000488923 CRB1P82279 1406 aa8.34□□□□□ -1.07
HDLBP-243ENST00000488923 PLEKHG2Q9H7P9 1386 aa8.34□□□□□ -1.07
HDLBP-243ENST00000488923 PHRF1Q9P1Y6 1649 aaKnown RBP8.33□□□□□ -1.08
HDLBP-243ENST00000488923 MAP3K9P80192 1104 aa8.33□□□□□ -1.08
HDLBP-243ENST00000488923 MTHFSDQ2M296 383 aaKnown RBP8.33□□□□□ -1.08
HDLBP-243ENST00000488923 C8orf34Q49A92 452 aa8.33□□□□□ -1.08
HDLBP-243ENST00000488923 DDX27Q96GQ7 796 aaKnown RBP8.33□□□□□ -1.08
HDLBP-243ENST00000488923 TSPYL4Q9UJ04 414 aa8.33□□□□□ -1.08
HDLBP-243ENST00000488923 PDZRN3Q9UPQ7 1066 aa8.33□□□□□ -1.08
HDLBP-243ENST00000488923 MAP3K5Q99683 1374 aa8.33□□□□□ -1.08
HDLBP-243ENST00000488923 USP19O94966 1318 aa8.32□□□□□ -1.08
HDLBP-243ENST00000488923 FAM83GA6ND36 823 aa8.32□□□□□ -1.08
HDLBP-243ENST00000488923 ZBTB7BO15156 539 aaPredicted RBP8.32□□□□□ -1.08
HDLBP-243ENST00000488923 ATF3P18847 181 aa8.32□□□□□ -1.08
HDLBP-243ENST00000488923 MFSD10Q14728 455 aa8.32□□□□□ -1.08
HDLBP-243ENST00000488923 AMOTQ4VCS5 1084 aa8.32□□□□□ -1.08
HDLBP-243ENST00000488923 INTS3Q68E01 1043 aaKnown RBP8.32□□□□□ -1.08
HDLBP-243ENST00000488923 ZNF787Q6DD87 383 aa8.32□□□□□ -1.08
HDLBP-243ENST00000488923 TSPYL6Q8N831 410 aa8.32□□□□□ -1.08
HDLBP-243ENST00000488923 C8orf58Q8NAV2 365 aa8.32□□□□□ -1.08
HDLBP-243ENST00000488923 STK31Q9BXU1 1019 aa8.32□□□□□ -1.08
HDLBP-243ENST00000488923 KIAA1468Q9P260 1216 aa8.32□□□□□ -1.08
HDLBP-243ENST00000488923 SEPT9Q9UHD8 586 aaPredicted RBP8.32□□□□□ -1.08
HDLBP-243ENST00000488923 TSR3Q9UJK0 312 aaKnown RBP8.32□□□□□ -1.08
HDLBP-243ENST00000488923 TNNQ9UQP3 1299 aa8.32□□□□□ -1.08
HDLBP-243ENST00000488923 SLIT3O75094 1523 aa8.32□□□□□ -1.08
HDLBP-243ENST00000488923 NCAPD2Q15021 1401 aa8.31□□□□□ -1.08
HDLBP-243ENST00000488923 RGPD8O14715 1765 aaPredicted RBP8.31□□□□□ -1.08
HDLBP-243ENST00000488923 NFAT5O94916 1531 aa8.31□□□□□ -1.08
HDLBP-243ENST00000488923 DCTN1Q14203 1278 aa8.31□□□□□ -1.08
HDLBP-243ENST00000488923 TAF7Q15545 349 aaPredicted RBP8.31□□□□□ -1.08
HDLBP-243ENST00000488923 CCDC30Q5VVM6 783 aa8.31□□□□□ -1.08
HDLBP-243ENST00000488923 CADPS2Q86UW7 1296 aa8.31□□□□□ -1.08
HDLBP-243ENST00000488923 LARP6Q9BRS8 491 aaKnown RBP8.31□□□□□ -1.08
HDLBP-243ENST00000488923 C1orf167Q5SNV9 1468 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms