RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 GIGYF1O75420 1035 aaPredicted RBP16.71■□□□□ 0.27
CHD1L-208ENST00000488864 RBM6P78332 1123 aaKnown RBP16.71■□□□□ 0.27
CHD1L-208ENST00000488864 ALDH1L2Q3SY69 923 aa16.7■□□□□ 0.26
CHD1L-208ENST00000488864 HDGFL1Q5TGJ6 251 aa16.7■□□□□ 0.26
CHD1L-208ENST00000488864 FAM43AQ8N2R8 423 aa16.7■□□□□ 0.26
CHD1L-208ENST00000488864 CLUAP1Q96AJ1 413 aa16.7■□□□□ 0.26
CHD1L-208ENST00000488864 NOB1Q9ULX3 412 aaKnown RBP16.7■□□□□ 0.26
CHD1L-208ENST00000488864 PTF1AQ7RTS3 328 aa16.7■□□□□ 0.26
CHD1L-208ENST00000488864 SLC4A2P04920 1241 aa16.69■□□□□ 0.26
CHD1L-208ENST00000488864 POTEAQ6S8J7 498 aa16.69■□□□□ 0.26
CHD1L-208ENST00000488864 MRPL50Q8N5N7 158 aaKnown RBP16.69■□□□□ 0.26
CHD1L-208ENST00000488864 ZNF428Q96B54 188 aa16.69■□□□□ 0.26
CHD1L-208ENST00000488864 ATG3Q9NT62 314 aa16.69■□□□□ 0.26
CHD1L-208ENST00000488864 DOT1LQ8TEK3 1739 aa16.69■□□□□ 0.26
CHD1L-208ENST00000488864 BCL9O00512 1426 aa16.69■□□□□ 0.26
CHD1L-208ENST00000488864 ILDR1Q86SU0 546 aaPredicted RBP16.69■□□□□ 0.26
CHD1L-208ENST00000488864 FMNL2Q96PY5 1086 aa16.69■□□□□ 0.26
CHD1L-208ENST00000488864 ITGB4P16144 1822 aa16.69■□□□□ 0.26
CHD1L-208ENST00000488864 ANXA1P04083 346 aa16.68■□□□□ 0.26
CHD1L-208ENST00000488864 RXRBP28702 533 aa16.68■□□□□ 0.26
CHD1L-208ENST00000488864 RBM42Q9BTD8 480 aaKnown RBP16.68■□□□□ 0.26
CHD1L-208ENST00000488864 USP16Q9Y5T5 823 aa16.68■□□□□ 0.26
CHD1L-208ENST00000488864 HEG1Q9ULI3 1381 aa16.67■□□□□ 0.26
CHD1L-208ENST00000488864 CCDC30Q5VVM6 783 aa16.67■□□□□ 0.26
CHD1L-208ENST00000488864 PANK1Q8TE04 598 aa16.67■□□□□ 0.26
CHD1L-208ENST00000488864 PIP4K2AP48426 406 aaPredicted RBP16.67■□□□□ 0.26
CHD1L-208ENST00000488864 STK31Q9BXU1 1019 aa16.67■□□□□ 0.26
CHD1L-208ENST00000488864 SLKQ9H2G2 1235 aaPredicted RBP16.67■□□□□ 0.26
CHD1L-208ENST00000488864 SNRPA1P09661 255 aaKnown RBP16.66■□□□□ 0.26
CHD1L-208ENST00000488864 G2E3Q7L622 706 aa16.66■□□□□ 0.26
CHD1L-208ENST00000488864 CHPF2Q9P2E5 772 aa16.66■□□□□ 0.26
CHD1L-208ENST00000488864 COG6Q9Y2V7 657 aa16.66■□□□□ 0.26
CHD1L-208ENST00000488864 RLBP1P12271 317 aa16.66■□□□□ 0.26
CHD1L-208ENST00000488864 TRIM27P14373 513 aa16.66■□□□□ 0.26
CHD1L-208ENST00000488864 ZKSCAN2Q63HK3 967 aa16.66■□□□□ 0.26
CHD1L-208ENST00000488864 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
CHD1L-208ENST00000488864 KIF16BQ96L93 1317 aa16.65■□□□□ 0.26
CHD1L-208ENST00000488864 HOXB7P09629 217 aa16.65■□□□□ 0.26
CHD1L-208ENST00000488864 PROSER3Q2NL68 480 aa16.64■□□□□ 0.25
CHD1L-208ENST00000488864 ATF7IPQ6VMQ6 1270 aa16.64■□□□□ 0.25
CHD1L-208ENST00000488864 UBE2Q2Q8WVN8 375 aa16.64■□□□□ 0.25
CHD1L-208ENST00000488864 PHAXQ9H814 394 aaKnown RBP16.64■□□□□ 0.25
CHD1L-208ENST00000488864 KCPQ6ZWJ8 1503 aa16.63■□□□□ 0.25
CHD1L-208ENST00000488864 PDE3AQ14432 1141 aa16.63■□□□□ 0.25
CHD1L-208ENST00000488864 FTSJ3Q8IY81 847 aaKnown RBP16.63■□□□□ 0.25
CHD1L-208ENST00000488864 SLC4A9Q96Q91 983 aa16.63■□□□□ 0.25
CHD1L-208ENST00000488864 BRPF1P55201 1214 aaPredicted RBP16.62■□□□□ 0.25
CHD1L-208ENST00000488864 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
CHD1L-208ENST00000488864 BRWD3Q6RI45 1802 aa16.62■□□□□ 0.25
CHD1L-208ENST00000488864 C5P01031 1676 aa16.62■□□□□ 0.25
CHD1L-208ENST00000488864 IPO8O15397 1037 aaKnown RBP16.62■□□□□ 0.25
CHD1L-208ENST00000488864 MYL6BP14649 208 aa16.62■□□□□ 0.25
CHD1L-208ENST00000488864 BECN1Q14457 450 aa16.62■□□□□ 0.25
CHD1L-208ENST00000488864 ANTXR1Q9H6X2 564 aa16.62■□□□□ 0.25
CHD1L-208ENST00000488864 DNAJC10Q8IXB1 793 aa16.61■□□□□ 0.25
CHD1L-208ENST00000488864 FLIIQ13045 1269 aa16.61■□□□□ 0.25
CHD1L-208ENST00000488864 DZIP1LQ8IYY4 767 aaKnown RBP16.61■□□□□ 0.25
CHD1L-208ENST00000488864 RRAGDQ9NQL2 400 aaPredicted RBP16.61■□□□□ 0.25
CHD1L-208ENST00000488864 PAPPAQ13219 1627 aa16.61■□□□□ 0.25
CHD1L-208ENST00000488864 F6X3S4 739 aa16.6■□□□□ 0.25
CHD1L-208ENST00000488864 KCNQ4P56696 695 aa16.6■□□□□ 0.25
CHD1L-208ENST00000488864 DBF4Q9UBU7 674 aaPredicted RBP16.6■□□□□ 0.25
CHD1L-208ENST00000488864 A1BGP04217 495 aa16.6■□□□□ 0.25
CHD1L-208ENST00000488864 FKBP5Q13451 457 aaPredicted RBP16.6■□□□□ 0.25
CHD1L-208ENST00000488864 PDIA6Q15084 440 aa16.6■□□□□ 0.25
CHD1L-208ENST00000488864 UBR2Q8IWV8 1755 aa16.6■□□□□ 0.25
CHD1L-208ENST00000488864 RGS12O14924 1447 aa16.6■□□□□ 0.25
CHD1L-208ENST00000488864 PALLDQ8WX93 1383 aa16.6■□□□□ 0.25
CHD1L-208ENST00000488864 AIMP1Q12904 312 aaKnown RBP16.59■□□□□ 0.25
CHD1L-208ENST00000488864 TRIM37O94972 964 aa16.58■□□□□ 0.25
CHD1L-208ENST00000488864 FAM196AQ6ZSG2 479 aa16.58■□□□□ 0.25
CHD1L-208ENST00000488864 TMEM57Q8N5G2 664 aa16.58■□□□□ 0.25
CHD1L-208ENST00000488864 LOC102724428A0A0B4J2F2 783 aa16.58■□□□□ 0.24
CHD1L-208ENST00000488864 ATP6V1AP38606 617 aa16.58■□□□□ 0.24
CHD1L-208ENST00000488864 SIK1P57059 783 aa16.58■□□□□ 0.24
CHD1L-208ENST00000488864 ITPRIPQ8IWB1 547 aa16.58■□□□□ 0.24
CHD1L-208ENST00000488864 DDX21Q9NR30 783 aaKnown RBP eCLIP16.58■□□□□ 0.24
CHD1L-208ENST00000488864 PCDHB15Q9Y5E8 787 aa16.58■□□□□ 0.24
CHD1L-208ENST00000488864 SLC4A10Q6U841 1118 aa16.57■□□□□ 0.24
CHD1L-208ENST00000488864 ARHGAP45Q92619 1136 aa16.57■□□□□ 0.24
CHD1L-208ENST00000488864 ZNF330Q9Y3S2 320 aaPredicted RBP16.57■□□□□ 0.24
CHD1L-208ENST00000488864 CHMP4AQ9BY43 222 aa16.57■□□□□ 0.24
CHD1L-208ENST00000488864 TBC1D2Q9BYX2 928 aa16.57■□□□□ 0.24
CHD1L-208ENST00000488864 NBPF26B4DH59 902 aa16.56■□□□□ 0.24
CHD1L-208ENST00000488864 NBPF14Q5TI25 921 aa16.56■□□□□ 0.24
CHD1L-208ENST00000488864 NBPF10Q6P3W6 841 aaKnown RBP16.56■□□□□ 0.24
CHD1L-208ENST00000488864 VSIG10Q8N0Z9 540 aa16.56■□□□□ 0.24
CHD1L-208ENST00000488864 NBPF15Q8N660 670 aa16.56■□□□□ 0.24
CHD1L-208ENST00000488864 API5Q9BZZ5 524 aaKnown RBP16.56■□□□□ 0.24
CHD1L-208ENST00000488864 PTPRCP08575 1304 aa16.56■□□□□ 0.24
CHD1L-208ENST00000488864 TBC1D32Q96NH3 1257 aa16.56■□□□□ 0.24
CHD1L-208ENST00000488864 SMARCC1Q92922 1105 aaPredicted RBP16.55■□□□□ 0.24
CHD1L-208ENST00000488864 ARXQ96QS3 562 aa16.55■□□□□ 0.24
CHD1L-208ENST00000488864 PDZRN3Q9UPQ7 1066 aa16.55■□□□□ 0.24
CHD1L-208ENST00000488864 STARD3NLO95772 234 aa16.55■□□□□ 0.24
CHD1L-208ENST00000488864 ITPK1Q13572 414 aa16.55■□□□□ 0.24
CHD1L-208ENST00000488864 BCL11BQ9C0K0 894 aaPredicted RBP16.55■□□□□ 0.24
CHD1L-208ENST00000488864 HYPKQ9NX55 129 aa16.55■□□□□ 0.24
CHD1L-208ENST00000488864 PI4KAP2A4QPH2 592 aa16.54■□□□□ 0.24
CHD1L-208ENST00000488864 MVPQ14764 893 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms