RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 KAT6BQ8WYB5 2073 aa13.67□□□□□ -0.22
USP11-209ENST00000488848 RXRBP28702 533 aa13.66□□□□□ -0.22
USP11-209ENST00000488848 FAM196AQ6ZSG2 479 aa13.66□□□□□ -0.22
USP11-209ENST00000488848 KRT27Q7Z3Y8 459 aa13.66□□□□□ -0.22
USP11-209ENST00000488848 BCL2L13Q9BXK5 485 aa13.66□□□□□ -0.22
USP11-209ENST00000488848 HYPKQ9NX55 129 aa13.66□□□□□ -0.22
USP11-209ENST00000488848 NOB1Q9ULX3 412 aaKnown RBP13.66□□□□□ -0.22
USP11-209ENST00000488848 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
USP11-209ENST00000488848 FLIIQ13045 1269 aa13.65□□□□□ -0.22
USP11-209ENST00000488848 DZIP1LQ8IYY4 767 aaKnown RBP13.65□□□□□ -0.22
USP11-209ENST00000488848 SLC4A9Q96Q91 983 aa13.65□□□□□ -0.22
USP11-209ENST00000488848 GTF3C3Q9Y5Q9 886 aa13.65□□□□□ -0.22
USP11-209ENST00000488848 PALLDQ8WX93 1383 aa13.65□□□□□ -0.22
USP11-209ENST00000488848 NUP188Q5SRE5 1749 aa13.64□□□□□ -0.23
USP11-209ENST00000488848 PLIN1O60240 522 aa13.64□□□□□ -0.23
USP11-209ENST00000488848 RLBP1P12271 317 aa13.64□□□□□ -0.23
USP11-209ENST00000488848 C20orf194Q5TEA3 1177 aa13.64□□□□□ -0.23
USP11-209ENST00000488848 INTS3Q68E01 1043 aaKnown RBP13.64□□□□□ -0.23
USP11-209ENST00000488848 BCL11BQ9C0K0 894 aaPredicted RBP13.64□□□□□ -0.23
USP11-209ENST00000488848 CHPF2Q9P2E5 772 aa13.64□□□□□ -0.23
USP11-209ENST00000488848 TAF1LQ8IZX4 1826 aa13.63□□□□□ -0.23
USP11-209ENST00000488848 PRAMEF22A3QJZ6 481 aa13.63□□□□□ -0.23
USP11-209ENST00000488848 FKBP8Q14318 412 aa13.63□□□□□ -0.23
USP11-209ENST00000488848 MVPQ14764 893 aaKnown RBP13.63□□□□□ -0.23
USP11-209ENST00000488848 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
USP11-209ENST00000488848 TNS1Q9HBL0 1735 aaKnown RBP13.63□□□□□ -0.23
USP11-209ENST00000488848 RGL2O15211 777 aa13.62□□□□□ -0.23
USP11-209ENST00000488848 KCNQ2O43526 872 aa13.62□□□□□ -0.23
USP11-209ENST00000488848 HMGB2P26583 209 aaKnown RBP13.62□□□□□ -0.23
USP11-209ENST00000488848 POTEAQ6S8J7 498 aa13.62□□□□□ -0.23
USP11-209ENST00000488848 ADCY9O60503 1353 aa13.61□□□□□ -0.23
USP11-209ENST00000488848 ARFGEF2Q9Y6D5 1785 aa13.61□□□□□ -0.23
USP11-209ENST00000488848 LOC102724428A0A0B4J2F2 783 aa13.61□□□□□ -0.23
USP11-209ENST00000488848 STARD3NLO95772 234 aa13.61□□□□□ -0.23
USP11-209ENST00000488848 CYP19A1P11511 503 aaPredicted RBP13.61□□□□□ -0.23
USP11-209ENST00000488848 CANXP27824 592 aaKnown RBP13.61□□□□□ -0.23
USP11-209ENST00000488848 SIK1P57059 783 aa13.61□□□□□ -0.23
USP11-209ENST00000488848 G2E3Q7L622 706 aa13.61□□□□□ -0.23
USP11-209ENST00000488848 FTSJ3Q8IY81 847 aaKnown RBP13.61□□□□□ -0.23
USP11-209ENST00000488848 FRAT1Q92837 279 aaPredicted RBP13.61□□□□□ -0.23
USP11-209ENST00000488848 CHMP4BQ9H444 224 aaKnown RBP13.61□□□□□ -0.23
USP11-209ENST00000488848 DDX19BQ9UMR2 479 aa13.61□□□□□ -0.23
USP11-209ENST00000488848 MYH14Q7Z406 1995 aaKnown RBP13.61□□□□□ -0.23
USP11-209ENST00000488848 A0A0G2JS52 829 aa13.6□□□□□ -0.23
USP11-209ENST00000488848 NBPF26B4DH59 902 aa13.6□□□□□ -0.23
USP11-209ENST00000488848 MYT1Q01538 1121 aa13.6□□□□□ -0.23
USP11-209ENST00000488848 PROSER3Q2NL68 480 aa13.6□□□□□ -0.23
USP11-209ENST00000488848 NBPF14Q5TI25 921 aa13.6□□□□□ -0.23
USP11-209ENST00000488848 NBPF10Q6P3W6 841 aaKnown RBP13.6□□□□□ -0.23
USP11-209ENST00000488848 NBPF15Q8N660 670 aa13.6□□□□□ -0.23
USP11-209ENST00000488848 ACSBG1Q96GR2 724 aa13.6□□□□□ -0.23
USP11-209ENST00000488848 CRBNQ96SW2 442 aa13.6□□□□□ -0.23
USP11-209ENST00000488848 CNTNAP4Q9C0A0 1308 aa13.6□□□□□ -0.23
USP11-209ENST00000488848 PTCD1O75127 700 aaKnown RBP13.59□□□□□ -0.23
USP11-209ENST00000488848 EIF2S2P20042 333 aaKnown RBP13.59□□□□□ -0.23
USP11-209ENST00000488848 CCT4P50991 539 aaKnown RBP13.59□□□□□ -0.23
USP11-209ENST00000488848 DNAJC10Q8IXB1 793 aa13.59□□□□□ -0.23
USP11-209ENST00000488848 PANK1Q8TE04 598 aa13.59□□□□□ -0.23
USP11-209ENST00000488848 SYTL4Q96C24 671 aaPredicted RBP13.59□□□□□ -0.23
USP11-209ENST00000488848 PPP4R2Q9NY27 417 aa13.59□□□□□ -0.23
USP11-209ENST00000488848 IL6STP40189 918 aaPredicted RBP13.58□□□□□ -0.24
USP11-209ENST00000488848 RC3H1Q5TC82 1133 aaKnown RBP13.58□□□□□ -0.24
USP11-209ENST00000488848 KSR2Q6VAB6 950 aa13.58□□□□□ -0.24
USP11-209ENST00000488848 TMEM57Q8N5G2 664 aa13.58□□□□□ -0.24
USP11-209ENST00000488848 EXOC6Q8TAG9 804 aa13.58□□□□□ -0.24
USP11-209ENST00000488848 TNNQ9UQP3 1299 aa13.58□□□□□ -0.24
USP11-209ENST00000488848 BCORQ6W2J9 1755 aa13.58□□□□□ -0.24
USP11-209ENST00000488848 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
USP11-209ENST00000488848 FKBP5Q13451 457 aaPredicted RBP13.57□□□□□ -0.24
USP11-209ENST00000488848 CLUAP1Q96AJ1 413 aa13.57□□□□□ -0.24
USP11-209ENST00000488848 PHAXQ9H814 394 aaKnown RBP13.57□□□□□ -0.24
USP11-209ENST00000488848 ZBTB40Q9NUA8 1239 aa13.57□□□□□ -0.24
USP11-209ENST00000488848 COL15A1P39059 1388 aa13.57□□□□□ -0.24
USP11-209ENST00000488848 C4BP0C0L5 1744 aa13.56□□□□□ -0.24
USP11-209ENST00000488848 ANKRD36CQ5JPF3 1778 aa13.56□□□□□ -0.24
USP11-209ENST00000488848 TCERG1O14776 1098 aaKnown RBP13.56□□□□□ -0.24
USP11-209ENST00000488848 ZBTB7BO15156 539 aaPredicted RBP13.56□□□□□ -0.24
USP11-209ENST00000488848 PLSCR1O15162 318 aa13.56□□□□□ -0.24
USP11-209ENST00000488848 ITPK1Q13572 414 aa13.56□□□□□ -0.24
USP11-209ENST00000488848 SLC27A3Q5K4L6 730 aa13.56□□□□□ -0.24
USP11-209ENST00000488848 PTF1AQ7RTS3 328 aa13.56□□□□□ -0.24
USP11-209ENST00000488848 DNAAF4Q8WXU2 420 aa13.56□□□□□ -0.24
USP11-209ENST00000488848 COG6Q9Y2V7 657 aa13.56□□□□□ -0.24
USP11-209ENST00000488848 SCN7AQ01118 1682 aa13.56□□□□□ -0.24
USP11-209ENST00000488848 ALDH1L1O75891 902 aa13.55□□□□□ -0.24
USP11-209ENST00000488848 EIF5P55010 431 aaKnown RBP13.55□□□□□ -0.24
USP11-209ENST00000488848 IRX6P78412 446 aaPredicted RBP13.55□□□□□ -0.24
USP11-209ENST00000488848 BEND3Q5T5X7 828 aa13.55□□□□□ -0.24
USP11-209ENST00000488848 INTS5Q6P9B9 1019 aaKnown RBP13.55□□□□□ -0.24
USP11-209ENST00000488848 PLBD2Q8NHP8 589 aa13.55□□□□□ -0.24
USP11-209ENST00000488848 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
USP11-209ENST00000488848 UTYO14607 1347 aa13.55□□□□□ -0.24
USP11-209ENST00000488848 PI4KAP2A4QPH2 592 aa13.54□□□□□ -0.24
USP11-209ENST00000488848 ATP6V1AP38606 617 aa13.54□□□□□ -0.24
USP11-209ENST00000488848 TRIM28Q13263 835 aaKnown RBP13.54□□□□□ -0.24
USP11-209ENST00000488848 PI4KAP1Q8N8J0 262 aa13.54□□□□□ -0.24
USP11-209ENST00000488848 LINS1Q8NG48 757 aa13.54□□□□□ -0.24
USP11-209ENST00000488848 XAGE3Q8WTP9 111 aa13.54□□□□□ -0.24
USP11-209ENST00000488848 NECTIN2Q92692 538 aa13.54□□□□□ -0.24
USP11-209ENST00000488848 CCDC87Q9NVE4 849 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms