RNA–Protein interactions for RNA: ENST00000488592.1

SCMH1-215, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2

Gene SCMH1, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-215ENST00000488592 ZNF790Q6PG37 636 aa16.81■□□□□ 0.28
SCMH1-215ENST00000488592 RSPH6AQ9H0K4 717 aa16.81■□□□□ 0.28
SCMH1-215ENST00000488592 GPBP1L1Q9HC44 474 aaPredicted RBP16.81■□□□□ 0.28
SCMH1-215ENST00000488592 A0A087WZG4 1122 aa16.8■□□□□ 0.28
SCMH1-215ENST00000488592 POLRMTO00411 1230 aaKnown RBP16.8■□□□□ 0.28
SCMH1-215ENST00000488592 DDR1Q08345 913 aa16.8■□□□□ 0.28
SCMH1-215ENST00000488592 IL17REQ8NFR9 667 aa16.8■□□□□ 0.28
SCMH1-215ENST00000488592 SRP68Q9UHB9 627 aaKnown RBP16.8■□□□□ 0.28
SCMH1-215ENST00000488592 FCHSD2O94868 740 aa16.79■□□□□ 0.28
SCMH1-215ENST00000488592 DPEP1P16444 411 aa16.79■□□□□ 0.28
SCMH1-215ENST00000488592 PPP2R1AP30153 589 aa16.79■□□□□ 0.28
SCMH1-215ENST00000488592 PIM2Q9P1W9 311 aa16.79■□□□□ 0.28
SCMH1-215ENST00000488592 ZBTB1Q9Y2K1 713 aa16.79■□□□□ 0.28
SCMH1-215ENST00000488592 A0A0G2JLW4 131 aa16.78■□□□□ 0.28
SCMH1-215ENST00000488592 HTATSF1O43719 755 aaKnown RBP16.78■□□□□ 0.28
SCMH1-215ENST00000488592 PRKAR2BP31323 418 aa16.78■□□□□ 0.28
SCMH1-215ENST00000488592 EIF5P55010 431 aaKnown RBP16.78■□□□□ 0.28
SCMH1-215ENST00000488592 BCS1LQ9Y276 419 aa16.78■□□□□ 0.28
SCMH1-215ENST00000488592 BCORQ6W2J9 1755 aa16.77■□□□□ 0.28
SCMH1-215ENST00000488592 KCNA3P22001 575 aa16.77■□□□□ 0.28
SCMH1-215ENST00000488592 USPL1Q5W0Q7 1092 aa16.77■□□□□ 0.28
SCMH1-215ENST00000488592 ZNF496Q96IT1 587 aaPredicted RBP16.77■□□□□ 0.28
SCMH1-215ENST00000488592 FMNL2Q96PY5 1086 aa16.77■□□□□ 0.28
SCMH1-215ENST00000488592 SBF1O95248 1867 aa16.76■□□□□ 0.27
SCMH1-215ENST00000488592 SENP3-EIF4A1A0A087X0R7 540 aa16.76■□□□□ 0.27
SCMH1-215ENST00000488592 IL6STP40189 918 aaPredicted RBP16.76■□□□□ 0.27
SCMH1-215ENST00000488592 DALRD3Q5D0E6 543 aaKnown RBP16.76■□□□□ 0.27
SCMH1-215ENST00000488592 PDZRN3Q9UPQ7 1066 aa16.76■□□□□ 0.27
SCMH1-215ENST00000488592 RGL2O15211 777 aa16.75■□□□□ 0.27
SCMH1-215ENST00000488592 NFIXQ14938 502 aa16.75■□□□□ 0.27
SCMH1-215ENST00000488592 ZC3H4Q9UPT8 1303 aaKnown RBP16.74■□□□□ 0.27
SCMH1-215ENST00000488592 U2AF1L5P0DN76 240 aaPredicted RBP16.74■□□□□ 0.27
SCMH1-215ENST00000488592 U2AF1Q01081 240 aaKnown RBP eCLIP16.74■□□□□ 0.27
SCMH1-215ENST00000488592 PHACTR3Q96KR7 559 aa16.74■□□□□ 0.27
SCMH1-215ENST00000488592 DLG5Q8TDM6 1919 aa16.74■□□□□ 0.27
SCMH1-215ENST00000488592 CEP350Q5VT06 3117 aa16.73■□□□□ 0.27
SCMH1-215ENST00000488592 BTBD11A6QL63 1104 aa16.73■□□□□ 0.27
SCMH1-215ENST00000488592 RTF1Q92541 710 aaKnown RBP16.73■□□□□ 0.27
SCMH1-215ENST00000488592 BCL2L12Q9HB09 334 aa16.73■□□□□ 0.27
SCMH1-215ENST00000488592 LAMB4A4D0S4 1761 aa16.73■□□□□ 0.27
SCMH1-215ENST00000488592 WWC3Q9ULE0 1092 aa16.72■□□□□ 0.27
SCMH1-215ENST00000488592 CARMIL3Q8ND23 1372 aa16.72■□□□□ 0.27
SCMH1-215ENST00000488592 ANKRD31Q8N7Z5 1873 aa16.71■□□□□ 0.27
SCMH1-215ENST00000488592 SERPINB2P05120 415 aa16.71■□□□□ 0.27
SCMH1-215ENST00000488592 CANXP27824 592 aaKnown RBP16.71■□□□□ 0.27
SCMH1-215ENST00000488592 ARHGAP27Q6ZUM4 889 aa16.71■□□□□ 0.27
SCMH1-215ENST00000488592 NPM2Q86SE8 214 aaKnown RBP16.71■□□□□ 0.27
SCMH1-215ENST00000488592 TNRC6CQ9HCJ0 1690 aaKnown RBP16.71■□□□□ 0.27
SCMH1-215ENST00000488592 KDM3BQ7LBC6 1761 aa16.7■□□□□ 0.26
SCMH1-215ENST00000488592 ARFGEF2Q9Y6D5 1785 aa16.7■□□□□ 0.26
SCMH1-215ENST00000488592 NEFMP07197 916 aa16.7■□□□□ 0.26
SCMH1-215ENST00000488592 CNGB1Q14028 1251 aaPredicted RBP16.7■□□□□ 0.26
SCMH1-215ENST00000488592 KIF3CO14782 793 aa16.69■□□□□ 0.26
SCMH1-215ENST00000488592 SNRPA1P09661 255 aaKnown RBP16.69■□□□□ 0.26
SCMH1-215ENST00000488592 PNNQ9H307 717 aaKnown RBP16.69■□□□□ 0.26
SCMH1-215ENST00000488592 CLEC4GQ6UXB4 293 aa16.68■□□□□ 0.26
SCMH1-215ENST00000488592 HSPA6P17066 643 aa16.67■□□□□ 0.26
SCMH1-215ENST00000488592 CHRNA5P30532 468 aa16.67■□□□□ 0.26
SCMH1-215ENST00000488592 PNISRQ8TF01 805 aaKnown RBP16.67■□□□□ 0.26
SCMH1-215ENST00000488592 BRIP1Q9BX63 1249 aa16.67■□□□□ 0.26
SCMH1-215ENST00000488592 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
SCMH1-215ENST00000488592 DICER1Q9UPY3 1922 aaKnown RBP16.66■□□□□ 0.26
SCMH1-215ENST00000488592 H0YIN7 160 aa16.66■□□□□ 0.26
SCMH1-215ENST00000488592 CAMTA2O94983 1202 aa16.66■□□□□ 0.26
SCMH1-215ENST00000488592 PDE6BP35913 854 aa16.66■□□□□ 0.26
SCMH1-215ENST00000488592 C9orf131Q5VYM1 1079 aa16.66■□□□□ 0.26
SCMH1-215ENST00000488592 TTLL6Q8N841 843 aa16.66■□□□□ 0.26
SCMH1-215ENST00000488592 ZNF526Q8TF50 670 aaPredicted RBP16.66■□□□□ 0.26
SCMH1-215ENST00000488592 KDM2BQ8NHM5 1336 aa16.66■□□□□ 0.26
SCMH1-215ENST00000488592 FER1L6Q2WGJ9 1857 aa16.65■□□□□ 0.26
SCMH1-215ENST00000488592 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
SCMH1-215ENST00000488592 TOMM70O94826 608 aa16.65■□□□□ 0.26
SCMH1-215ENST00000488592 TAF7Q15545 349 aaPredicted RBP16.65■□□□□ 0.26
SCMH1-215ENST00000488592 TBC1D9BQ66K14 1250 aa16.65■□□□□ 0.26
SCMH1-215ENST00000488592 ZNF652Q9Y2D9 606 aa16.65■□□□□ 0.26
SCMH1-215ENST00000488592 A1BGP04217 495 aa16.64■□□□□ 0.25
SCMH1-215ENST00000488592 MCM10Q7L590 875 aa16.64■□□□□ 0.25
SCMH1-215ENST00000488592 SETDB2Q96T68 719 aa16.64■□□□□ 0.25
SCMH1-215ENST00000488592 TIAM2Q8IVF5 1701 aa16.64■□□□□ 0.25
SCMH1-215ENST00000488592 KCNQ3O43525 872 aa16.63■□□□□ 0.25
SCMH1-215ENST00000488592 RALBP1Q15311 655 aa16.63■□□□□ 0.25
SCMH1-215ENST00000488592 PRR5LQ6MZQ0 368 aa16.63■□□□□ 0.25
SCMH1-215ENST00000488592 DZIP3Q86Y13 1208 aaKnown RBP16.63■□□□□ 0.25
SCMH1-215ENST00000488592 C2CD5Q86YS7 1000 aa16.63■□□□□ 0.25
SCMH1-215ENST00000488592 PLEKHF1Q96S99 279 aa16.63■□□□□ 0.25
SCMH1-215ENST00000488592 TBC1D2BQ9UPU7 963 aa16.63■□□□□ 0.25
SCMH1-215ENST00000488592 LMNB1P20700 586 aa16.62■□□□□ 0.25
SCMH1-215ENST00000488592 ST5P78524 1137 aa16.62■□□□□ 0.25
SCMH1-215ENST00000488592 CNBD1Q8NA66 436 aa16.62■□□□□ 0.25
SCMH1-215ENST00000488592 RNF181Q9P0P0 153 aa16.62■□□□□ 0.25
SCMH1-215ENST00000488592 USP16Q9Y5T5 823 aa16.62■□□□□ 0.25
SCMH1-215ENST00000488592 NFE2L2Q16236 605 aa16.61■□□□□ 0.25
SCMH1-215ENST00000488592 RBM46Q8TBY0 533 aaKnown RBP16.61■□□□□ 0.25
SCMH1-215ENST00000488592 ZNF330Q9Y3S2 320 aaPredicted RBP16.61■□□□□ 0.25
SCMH1-215ENST00000488592 LTBP3Q9NS15 1303 aa16.61■□□□□ 0.25
SCMH1-215ENST00000488592 SOGA3Q5TF21 947 aa16.6■□□□□ 0.25
SCMH1-215ENST00000488592 STYK1Q6J9G0 422 aa16.6■□□□□ 0.25
SCMH1-215ENST00000488592 BICDL1Q6ZP65 573 aa16.6■□□□□ 0.25
SCMH1-215ENST00000488592 MAPK8IP3Q9UPT6 1336 aa16.6■□□□□ 0.25
SCMH1-215ENST00000488592 NUP98P52948 1817 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms