RNA–Protein interactions for RNA: ENST00000488590.1

SUPT20H-218, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 4

Gene SUPT20H, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-218ENST00000488590 L3MBTL3Q96JM7 780 aaPredicted RBP13.22□□□□□ -0.29
SUPT20H-218ENST00000488590 TERF2IPQ9NYB0 399 aa13.22□□□□□ -0.29
SUPT20H-218ENST00000488590 NRXN2Q9P2S2 1712 aa13.22□□□□□ -0.29
SUPT20H-218ENST00000488590 TSKSQ9UJT2 592 aa13.21□□□□□ -0.29
SUPT20H-218ENST00000488590 PHKG2P15735 406 aa13.2□□□□□ -0.3
SUPT20H-218ENST00000488590 FER1L6Q2WGJ9 1857 aa13.2□□□□□ -0.3
SUPT20H-218ENST00000488590 AFDNP55196 1824 aaKnown RBP13.2□□□□□ -0.3
SUPT20H-218ENST00000488590 RBM42Q9BTD8 480 aaKnown RBP13.19□□□□□ -0.3
SUPT20H-218ENST00000488590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.19□□□□□ -0.3
SUPT20H-218ENST00000488590 SPG7Q9UQ90 795 aa13.19□□□□□ -0.3
SUPT20H-218ENST00000488590 CARMIL3Q8ND23 1372 aa13.19□□□□□ -0.3
SUPT20H-218ENST00000488590 SCN4AP35499 1836 aa13.18□□□□□ -0.3
SUPT20H-218ENST00000488590 LTBP3Q9NS15 1303 aa13.18□□□□□ -0.3
SUPT20H-218ENST00000488590 IQCA1LA6NCM1 817 aa13.18□□□□□ -0.3
SUPT20H-218ENST00000488590 CRKLP46109 303 aaKnown RBP13.18□□□□□ -0.3
SUPT20H-218ENST00000488590 NFIXQ14938 502 aa13.18□□□□□ -0.3
SUPT20H-218ENST00000488590 TONSLQ96HA7 1378 aa13.18□□□□□ -0.3
SUPT20H-218ENST00000488590 C2CD5Q86YS7 1000 aa13.17□□□□□ -0.3
SUPT20H-218ENST00000488590 CNTROBQ8N137 903 aa13.17□□□□□ -0.3
SUPT20H-218ENST00000488590 L3MBTL2Q969R5 705 aa13.17□□□□□ -0.3
SUPT20H-218ENST00000488590 CAPNS2Q96L46 248 aa13.17□□□□□ -0.3
SUPT20H-218ENST00000488590 ROCK2O75116 1388 aaKnown RBP13.17□□□□□ -0.3
SUPT20H-218ENST00000488590 CASP8AP2Q9UKL3 1982 aa13.16□□□□□ -0.3
SUPT20H-218ENST00000488590 C21orf2O43822 256 aa13.16□□□□□ -0.3
SUPT20H-218ENST00000488590 USPL1Q5W0Q7 1092 aa13.16□□□□□ -0.3
SUPT20H-218ENST00000488590 MAP1SQ66K74 1059 aaPredicted RBP13.16□□□□□ -0.3
SUPT20H-218ENST00000488590 CYP4F22Q6NT55 531 aa13.16□□□□□ -0.3
SUPT20H-218ENST00000488590 INTS5Q6P9B9 1019 aaKnown RBP13.16□□□□□ -0.3
SUPT20H-218ENST00000488590 IFNL2Q8IZJ0 200 aa13.16□□□□□ -0.3
SUPT20H-218ENST00000488590 GPR101Q96P66 508 aaPredicted RBP13.16□□□□□ -0.3
SUPT20H-218ENST00000488590 FLT4P35916 1363 aa13.16□□□□□ -0.3
SUPT20H-218ENST00000488590 FYB1O15117 783 aa13.15□□□□□ -0.3
SUPT20H-218ENST00000488590 FMR1Q06787 632 aaKnown RBP eCLIP13.15□□□□□ -0.3
SUPT20H-218ENST00000488590 DGKZQ13574 1117 aa13.15□□□□□ -0.3
SUPT20H-218ENST00000488590 PUS7Q96PZ0 661 aaKnown RBP13.15□□□□□ -0.3
SUPT20H-218ENST00000488590 BCL2L12Q9HB09 334 aa13.15□□□□□ -0.3
SUPT20H-218ENST00000488590 ABT1Q9ULW3 272 aaKnown RBP13.15□□□□□ -0.3
SUPT20H-218ENST00000488590 KIF24Q5T7B8 1368 aa13.15□□□□□ -0.3
SUPT20H-218ENST00000488590 H0YIN7 160 aa13.14□□□□□ -0.31
SUPT20H-218ENST00000488590 SERPINB2P05120 415 aa13.14□□□□□ -0.31
SUPT20H-218ENST00000488590 SOX10P56693 466 aa13.14□□□□□ -0.31
SUPT20H-218ENST00000488590 EAPPQ56P03 285 aaPredicted RBP13.14□□□□□ -0.31
SUPT20H-218ENST00000488590 BEGAINQ9BUH8 593 aa13.14□□□□□ -0.31
SUPT20H-218ENST00000488590 DDX21Q9NR30 783 aaKnown RBP eCLIP13.14□□□□□ -0.31
SUPT20H-218ENST00000488590 ERVV-2B6SEH9 535 aa13.13□□□□□ -0.31
SUPT20H-218ENST00000488590 AOC2O75106 756 aa13.13□□□□□ -0.31
SUPT20H-218ENST00000488590 TAOK3Q9H2K8 898 aa13.13□□□□□ -0.31
SUPT20H-218ENST00000488590 GGNBP2Q9H3C7 697 aa13.13□□□□□ -0.31
SUPT20H-218ENST00000488590 TJP1Q07157 1748 aa13.13□□□□□ -0.31
SUPT20H-218ENST00000488590 EPHX2P34913 555 aa13.12□□□□□ -0.31
SUPT20H-218ENST00000488590 MAP2K2P36507 400 aa13.12□□□□□ -0.31
SUPT20H-218ENST00000488590 ECE1P42892 770 aa13.12□□□□□ -0.31
SUPT20H-218ENST00000488590 CST9Q5W186 159 aa13.12□□□□□ -0.31
SUPT20H-218ENST00000488590 EYA1Q99502 592 aa13.12□□□□□ -0.31
SUPT20H-218ENST00000488590 ZNF219Q9P2Y4 722 aaPredicted RBP13.12□□□□□ -0.31
SUPT20H-218ENST00000488590 ZNF541Q9H0D2 1346 aa13.12□□□□□ -0.31
SUPT20H-218ENST00000488590 ANKRD31Q8N7Z5 1873 aa13.11□□□□□ -0.31
SUPT20H-218ENST00000488590 PTCD1O75127 700 aaKnown RBP13.11□□□□□ -0.31
SUPT20H-218ENST00000488590 HACL1Q9UJ83 578 aa13.11□□□□□ -0.31
SUPT20H-218ENST00000488590 CLEC11AQ9Y240 323 aa13.11□□□□□ -0.31
SUPT20H-218ENST00000488590 SOS1Q07889 1333 aaPredicted RBP13.11□□□□□ -0.31
SUPT20H-218ENST00000488590 COL11A2P13942 1736 aaPredicted RBP13.1□□□□□ -0.31
SUPT20H-218ENST00000488590 CA12O43570 354 aa13.1□□□□□ -0.31
SUPT20H-218ENST00000488590 NARFQ9UHQ1 456 aa13.1□□□□□ -0.31
SUPT20H-218ENST00000488590 EMILIN1Q9Y6C2 1016 aa13.1□□□□□ -0.31
SUPT20H-218ENST00000488590 ZPR1O75312 459 aa13.09□□□□□ -0.31
SUPT20H-218ENST00000488590 GRM1Q13255 1194 aa13.09□□□□□ -0.31
SUPT20H-218ENST00000488590 PNMA8AQ86V59 439 aaPredicted RBP13.09□□□□□ -0.31
SUPT20H-218ENST00000488590 TLL2Q9Y6L7 1015 aa13.09□□□□□ -0.31
SUPT20H-218ENST00000488590 ZNF622Q969S3 477 aaKnown RBP eCLIP13.08□□□□□ -0.32
SUPT20H-218ENST00000488590 SLX4Q8IY92 1834 aa13.08□□□□□ -0.32
SUPT20H-218ENST00000488590 RNF123Q5XPI4 1314 aa13.08□□□□□ -0.32
SUPT20H-218ENST00000488590 PAXIP1Q6ZW49 1069 aaPredicted RBP13.07□□□□□ -0.32
SUPT20H-218ENST00000488590 C7orf43Q8WVR3 580 aa13.07□□□□□ -0.32
SUPT20H-218ENST00000488590 BRPF1P55201 1214 aaPredicted RBP13.06□□□□□ -0.32
SUPT20H-218ENST00000488590 HABP4Q5JVS0 413 aaKnown RBP13.06□□□□□ -0.32
SUPT20H-218ENST00000488590 BRIP1Q9BX63 1249 aa13.06□□□□□ -0.32
SUPT20H-218ENST00000488590 TRAF5O00463 557 aa13.05□□□□□ -0.32
SUPT20H-218ENST00000488590 SAPCD2Q86UD0 394 aa13.05□□□□□ -0.32
SUPT20H-218ENST00000488590 DNAJC10Q8IXB1 793 aa13.05□□□□□ -0.32
SUPT20H-218ENST00000488590 MKI67P46013 3256 aaKnown RBP13.05□□□□□ -0.32
SUPT20H-218ENST00000488590 WASHC2AQ641Q2 1341 aa13.05□□□□□ -0.32
SUPT20H-218ENST00000488590 SZT2Q5T011 3432 aa13.05□□□□□ -0.32
SUPT20H-218ENST00000488590 FZD9O00144 591 aa13.04□□□□□ -0.32
SUPT20H-218ENST00000488590 CABP4P57796 275 aa13.04□□□□□ -0.32
SUPT20H-218ENST00000488590 PRPF40BQ6NWY9 871 aaKnown RBP13.04□□□□□ -0.32
SUPT20H-218ENST00000488590 CCDC24Q8N4L8 307 aa13.04□□□□□ -0.32
SUPT20H-218ENST00000488590 TESK2Q96S53 571 aa13.04□□□□□ -0.32
SUPT20H-218ENST00000488590 ZIC5Q96T25 663 aa13.04□□□□□ -0.32
SUPT20H-218ENST00000488590 PDZRN3Q9UPQ7 1066 aa13.04□□□□□ -0.32
SUPT20H-218ENST00000488590 ANKRD26Q9UPS8 1709 aa13.04□□□□□ -0.32
SUPT20H-218ENST00000488590 COL15A1P39059 1388 aa13.04□□□□□ -0.32
SUPT20H-218ENST00000488590 CYP19A1P11511 503 aaPredicted RBP13.03□□□□□ -0.32
SUPT20H-218ENST00000488590 PDE6BP35913 854 aa13.03□□□□□ -0.32
SUPT20H-218ENST00000488590 CIAPIN1Q6FI81 312 aa13.03□□□□□ -0.32
SUPT20H-218ENST00000488590 PRR5LQ6MZQ0 368 aa13.03□□□□□ -0.32
SUPT20H-218ENST00000488590 NFATC2IPQ8NCF5 419 aa13.03□□□□□ -0.32
SUPT20H-218ENST00000488590 GCC1Q96CN9 775 aa13.03□□□□□ -0.32
SUPT20H-218ENST00000488590 SRGNP10124 158 aa13.02□□□□□ -0.33
SUPT20H-218ENST00000488590 ZBTB1Q9Y2K1 713 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms