RNA–Protein interactions for RNA: ENST00000488580.5

GCSAM-206, Transcript of germinal center associated signaling and motility, humanhuman

TSL 5

Gene GCSAM, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSAM-206ENST00000488580 KDM2AQ9Y2K7 1162 aa11.59□□□□□ -0.55
GCSAM-206ENST00000488580 AOC2O75106 756 aa11.58□□□□□ -0.56
GCSAM-206ENST00000488580 RFC4P35249 363 aa11.58□□□□□ -0.56
GCSAM-206ENST00000488580 ATP6V1AP38606 617 aa11.58□□□□□ -0.56
GCSAM-206ENST00000488580 MKRN4PQ13434 485 aaPredicted RBP11.58□□□□□ -0.56
GCSAM-206ENST00000488580 ITPK1Q13572 414 aa11.58□□□□□ -0.56
GCSAM-206ENST00000488580 TTLL6Q8N841 843 aa11.58□□□□□ -0.56
GCSAM-206ENST00000488580 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
GCSAM-206ENST00000488580 DDX21Q9NR30 783 aaKnown RBP eCLIP11.58□□□□□ -0.56
GCSAM-206ENST00000488580 BRPF1P55201 1214 aaPredicted RBP11.57□□□□□ -0.56
GCSAM-206ENST00000488580 MAP1SQ66K74 1059 aaPredicted RBP11.57□□□□□ -0.56
GCSAM-206ENST00000488580 PIGBQ92521 554 aa11.57□□□□□ -0.56
GCSAM-206ENST00000488580 IP6K1Q92551 441 aa11.57□□□□□ -0.56
GCSAM-206ENST00000488580 LTV1Q96GA3 475 aaPredicted RBP11.57□□□□□ -0.56
GCSAM-206ENST00000488580 CGNL1Q0VF96 1302 aa11.57□□□□□ -0.56
GCSAM-206ENST00000488580 STAC3Q96MF2 364 aa11.56□□□□□ -0.56
GCSAM-206ENST00000488580 PNMA8AQ86V59 439 aaPredicted RBP11.55□□□□□ -0.56
GCSAM-206ENST00000488580 DCAF11Q8TEB1 546 aa11.55□□□□□ -0.56
GCSAM-206ENST00000488580 SCN4AP35499 1836 aa11.55□□□□□ -0.56
GCSAM-206ENST00000488580 ADAMTS7Q9UKP4 1686 aa11.55□□□□□ -0.56
GCSAM-206ENST00000488580 USP31Q70CQ4 1352 aa11.54□□□□□ -0.56
GCSAM-206ENST00000488580 DDR1Q08345 913 aa11.54□□□□□ -0.56
GCSAM-206ENST00000488580 RC3H1Q5TC82 1133 aaKnown RBP11.54□□□□□ -0.56
GCSAM-206ENST00000488580 PLSCR2Q9NRY7 297 aa11.54□□□□□ -0.56
GCSAM-206ENST00000488580 TLL2Q9Y6L7 1015 aa11.54□□□□□ -0.56
GCSAM-206ENST00000488580 MEGF6O75095 1541 aa11.54□□□□□ -0.56
GCSAM-206ENST00000488580 MAP2P11137 1827 aaKnown RBP11.53□□□□□ -0.56
GCSAM-206ENST00000488580 CD44P16070 742 aaKnown RBP11.53□□□□□ -0.56
GCSAM-206ENST00000488580 EPHX2P34913 555 aa11.53□□□□□ -0.56
GCSAM-206ENST00000488580 HACL1Q9UJ83 578 aa11.53□□□□□ -0.56
GCSAM-206ENST00000488580 DICER1Q9UPY3 1922 aaKnown RBP11.52□□□□□ -0.56
GCSAM-206ENST00000488580 LTN1O94822 1766 aa11.52□□□□□ -0.57
GCSAM-206ENST00000488580 RPS6KA4O75676 772 aa11.52□□□□□ -0.57
GCSAM-206ENST00000488580 MNX1P50219 401 aaPredicted RBP11.52□□□□□ -0.57
GCSAM-206ENST00000488580 CLCN6P51797 869 aa11.52□□□□□ -0.57
GCSAM-206ENST00000488580 FKBP8Q14318 412 aa11.52□□□□□ -0.57
GCSAM-206ENST00000488580 CIAPIN1Q6FI81 312 aa11.52□□□□□ -0.57
GCSAM-206ENST00000488580 PCDH11XQ9BZA7 1347 aa11.52□□□□□ -0.57
GCSAM-206ENST00000488580 PCDH11YQ9BZA8 1340 aa11.52□□□□□ -0.57
GCSAM-206ENST00000488580 POLRMTO00411 1230 aaKnown RBP11.51□□□□□ -0.57
GCSAM-206ENST00000488580 TM4SF1P30408 202 aa11.51□□□□□ -0.57
GCSAM-206ENST00000488580 CST9Q5W186 159 aa11.51□□□□□ -0.57
GCSAM-206ENST00000488580 RAPGEF4Q8WZA2 1011 aa11.51□□□□□ -0.57
GCSAM-206ENST00000488580 FAM208AQ9UK61 1670 aaKnown RBP11.51□□□□□ -0.57
GCSAM-206ENST00000488580 ADAMTSL1Q8N6G6 1762 aa11.5□□□□□ -0.57
GCSAM-206ENST00000488580 ASAP1Q9ULH1 1129 aa11.5□□□□□ -0.57
GCSAM-206ENST00000488580 HPS5Q9UPZ3 1129 aa11.5□□□□□ -0.57
GCSAM-206ENST00000488580 LTBP3Q9NS15 1303 aa11.5□□□□□ -0.57
GCSAM-206ENST00000488580 CD163L1Q9NR16 1453 aa11.5□□□□□ -0.57
GCSAM-206ENST00000488580 TATP17735 454 aaPredicted RBP11.49□□□□□ -0.57
GCSAM-206ENST00000488580 CTU1Q7Z7A3 348 aaKnown RBP11.49□□□□□ -0.57
GCSAM-206ENST00000488580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.49□□□□□ -0.57
GCSAM-206ENST00000488580 CENPJQ9HC77 1338 aaPredicted RBP11.49□□□□□ -0.57
GCSAM-206ENST00000488580 KTN1Q86UP2 1357 aaKnown RBP11.49□□□□□ -0.57
GCSAM-206ENST00000488580 SMG6Q86US8 1419 aaKnown RBP11.49□□□□□ -0.57
GCSAM-206ENST00000488580 H0YIN7 160 aa11.48□□□□□ -0.57
GCSAM-206ENST00000488580 CYP27B1O15528 508 aa11.48□□□□□ -0.57
GCSAM-206ENST00000488580 C21orf2O43822 256 aa11.48□□□□□ -0.57
GCSAM-206ENST00000488580 FMR1Q06787 632 aaKnown RBP eCLIP11.48□□□□□ -0.57
GCSAM-206ENST00000488580 SAPCD2Q86UD0 394 aa11.48□□□□□ -0.57
GCSAM-206ENST00000488580 C2CD5Q86YS7 1000 aa11.48□□□□□ -0.57
GCSAM-206ENST00000488580 HHIPL1Q96JK4 782 aa11.48□□□□□ -0.57
GCSAM-206ENST00000488580 TAOK3Q9H2K8 898 aa11.48□□□□□ -0.57
GCSAM-206ENST00000488580 COLQQ9Y215 455 aaPredicted RBP11.48□□□□□ -0.57
GCSAM-206ENST00000488580 MAP3K19Q56UN5 1328 aa11.48□□□□□ -0.57
GCSAM-206ENST00000488580 ITGB4P16144 1822 aa11.48□□□□□ -0.57
GCSAM-206ENST00000488580 COL6A3P12111 3177 aa11.47□□□□□ -0.57
GCSAM-206ENST00000488580 NME9Q86XW9 330 aa11.47□□□□□ -0.57
GCSAM-206ENST00000488580 DCBLD2Q96PD2 775 aa11.47□□□□□ -0.57
GCSAM-206ENST00000488580 SRP68Q9UHB9 627 aaKnown RBP11.47□□□□□ -0.57
GCSAM-206ENST00000488580 MKI67P46013 3256 aaKnown RBP11.47□□□□□ -0.57
GCSAM-206ENST00000488580 CNTNAP4Q9C0A0 1308 aa11.46□□□□□ -0.57
GCSAM-206ENST00000488580 NKX1-1Q15270 411 aaPredicted RBP11.46□□□□□ -0.57
GCSAM-206ENST00000488580 PKN2Q16513 984 aaKnown RBP11.46□□□□□ -0.57
GCSAM-206ENST00000488580 AKAP4Q5JQC9 854 aa11.46□□□□□ -0.57
GCSAM-206ENST00000488580 NBPF6Q5VWK0 638 aa11.46□□□□□ -0.57
GCSAM-206ENST00000488580 NBPF4Q96M43 638 aa11.46□□□□□ -0.57
GCSAM-206ENST00000488580 SAGE1Q9NXZ1 904 aa11.46□□□□□ -0.57
GCSAM-206ENST00000488580 TMOD3Q9NYL9 352 aa11.46□□□□□ -0.57
GCSAM-206ENST00000488580 USP42Q9H9J4 1324 aaKnown RBP11.45□□□□□ -0.58
GCSAM-206ENST00000488580 NOGQ13253 232 aa11.45□□□□□ -0.58
GCSAM-206ENST00000488580 ATG3Q9NT62 314 aa11.45□□□□□ -0.58
GCSAM-206ENST00000488580 FARP1Q9Y4F1 1045 aaPredicted RBP11.45□□□□□ -0.58
GCSAM-206ENST00000488580 INSRP06213 1382 aa11.44□□□□□ -0.58
GCSAM-206ENST00000488580 EVC2Q86UK5 1308 aa11.44□□□□□ -0.58
GCSAM-206ENST00000488580 HOXC9P31274 260 aa11.44□□□□□ -0.58
GCSAM-206ENST00000488580 FER1L6Q2WGJ9 1857 aa11.44□□□□□ -0.58
GCSAM-206ENST00000488580 USHBP1Q8N6Y0 703 aa11.43□□□□□ -0.58
GCSAM-206ENST00000488580 SLC4A9Q96Q91 983 aa11.43□□□□□ -0.58
GCSAM-206ENST00000488580 ZIC5Q96T25 663 aa11.43□□□□□ -0.58
GCSAM-206ENST00000488580 RNF123Q5XPI4 1314 aa11.42□□□□□ -0.58
GCSAM-206ENST00000488580 DLEC1Q9Y238 1755 aa11.42□□□□□ -0.58
GCSAM-206ENST00000488580 TRAF5O00463 557 aa11.42□□□□□ -0.58
GCSAM-206ENST00000488580 AMPHP49418 695 aa11.42□□□□□ -0.58
GCSAM-206ENST00000488580 ZNF622Q969S3 477 aaKnown RBP eCLIP11.42□□□□□ -0.58
GCSAM-206ENST00000488580 ZNF541Q9H0D2 1346 aa11.41□□□□□ -0.58
GCSAM-206ENST00000488580 PDZRN3Q9UPQ7 1066 aa11.41□□□□□ -0.58
GCSAM-206ENST00000488580 TRIOBPQ9H2D6 2365 aa11.41□□□□□ -0.58
GCSAM-206ENST00000488580 RGPD2P0DJD1 1756 aa11.41□□□□□ -0.58
GCSAM-206ENST00000488580 KDRP35968 1356 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms