RNA–Protein interactions for RNA: ENST00000488410.5

TM2D1-209, Transcript of TM2 domain containing 1, humanhuman

TSL 3

Gene TM2D1, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-209ENST00000488410 TEFQ10587 303 aa13.17□□□□□ -0.3
TM2D1-209ENST00000488410 PER1O15534 1290 aaPredicted RBP13.16□□□□□ -0.3
TM2D1-209ENST00000488410 CYP19A1P11511 503 aaPredicted RBP13.16□□□□□ -0.3
TM2D1-209ENST00000488410 HSPA6P17066 643 aa13.16□□□□□ -0.3
TM2D1-209ENST00000488410 CFAP53Q96M91 514 aa13.16□□□□□ -0.3
TM2D1-209ENST00000488410 ZNF330Q9Y3S2 320 aaPredicted RBP13.16□□□□□ -0.3
TM2D1-209ENST00000488410 GNAT3A8MTJ3 354 aa13.15□□□□□ -0.3
TM2D1-209ENST00000488410 TM4SF1P30408 202 aa13.15□□□□□ -0.3
TM2D1-209ENST00000488410 CHRNA5P30532 468 aa13.15□□□□□ -0.3
TM2D1-209ENST00000488410 DDR1Q08345 913 aa13.15□□□□□ -0.3
TM2D1-209ENST00000488410 C9orf131Q5VYM1 1079 aa13.15□□□□□ -0.3
TM2D1-209ENST00000488410 GAS2L2Q8NHY3 880 aa13.15□□□□□ -0.3
TM2D1-209ENST00000488410 NARFQ9UHQ1 456 aa13.15□□□□□ -0.3
TM2D1-209ENST00000488410 C10orf71Q711Q0 1435 aa13.14□□□□□ -0.31
TM2D1-209ENST00000488410 TJP1Q07157 1748 aa13.14□□□□□ -0.31
TM2D1-209ENST00000488410 A0A087WZG4 1122 aa13.14□□□□□ -0.31
TM2D1-209ENST00000488410 KCNA3P22001 575 aa13.14□□□□□ -0.31
TM2D1-209ENST00000488410 BICDL1Q6ZP65 573 aa13.14□□□□□ -0.31
TM2D1-209ENST00000488410 VSIG10Q8N0Z9 540 aa13.14□□□□□ -0.31
TM2D1-209ENST00000488410 ADCY9O60503 1353 aa13.14□□□□□ -0.31
TM2D1-209ENST00000488410 SOS1Q07889 1333 aaPredicted RBP13.13□□□□□ -0.31
TM2D1-209ENST00000488410 POLRMTO00411 1230 aaKnown RBP13.13□□□□□ -0.31
TM2D1-209ENST00000488410 KIF3CO14782 793 aa13.13□□□□□ -0.31
TM2D1-209ENST00000488410 NPHP1O15259 732 aa13.13□□□□□ -0.31
TM2D1-209ENST00000488410 TEX13AQ9BXU3 409 aaPredicted RBP13.13□□□□□ -0.31
TM2D1-209ENST00000488410 RNF181Q9P0P0 153 aa13.13□□□□□ -0.31
TM2D1-209ENST00000488410 NUDCQ9Y266 331 aa13.13□□□□□ -0.31
TM2D1-209ENST00000488410 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
TM2D1-209ENST00000488410 ARFGEF1Q9Y6D6 1849 aa13.12□□□□□ -0.31
TM2D1-209ENST00000488410 H0YIN7 160 aa13.12□□□□□ -0.31
TM2D1-209ENST00000488410 TOMM70O94826 608 aa13.12□□□□□ -0.31
TM2D1-209ENST00000488410 SERPINB2P05120 415 aa13.12□□□□□ -0.31
TM2D1-209ENST00000488410 NFIXQ14938 502 aa13.12□□□□□ -0.31
TM2D1-209ENST00000488410 ZBTB1Q9Y2K1 713 aa13.12□□□□□ -0.31
TM2D1-209ENST00000488410 KDM2BQ8NHM5 1336 aa13.12□□□□□ -0.31
TM2D1-209ENST00000488410 KIAA1551Q9HCM1 1747 aa13.11□□□□□ -0.31
TM2D1-209ENST00000488410 COL15A1P39059 1388 aa13.11□□□□□ -0.31
TM2D1-209ENST00000488410 BRCA1P38398 1863 aaKnown RBP13.11□□□□□ -0.31
TM2D1-209ENST00000488410 C2CD5Q86YS7 1000 aa13.11□□□□□ -0.31
TM2D1-209ENST00000488410 NMRK2Q9NPI5 230 aa13.11□□□□□ -0.31
TM2D1-209ENST00000488410 BTBD11A6QL63 1104 aa13.1□□□□□ -0.31
TM2D1-209ENST00000488410 APLP1P51693 650 aa13.1□□□□□ -0.31
TM2D1-209ENST00000488410 ZNF790Q6PG37 636 aa13.1□□□□□ -0.31
TM2D1-209ENST00000488410 IL17REQ8NFR9 667 aa13.1□□□□□ -0.31
TM2D1-209ENST00000488410 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
TM2D1-209ENST00000488410 ZNF622Q969S3 477 aaKnown RBP eCLIP13.1□□□□□ -0.31
TM2D1-209ENST00000488410 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
TM2D1-209ENST00000488410 TBC1D2BQ9UPU7 963 aa13.1□□□□□ -0.31
TM2D1-209ENST00000488410 AFDNP55196 1824 aaKnown RBP13.1□□□□□ -0.31
TM2D1-209ENST00000488410 U2AF1L5P0DN76 240 aaPredicted RBP13.09□□□□□ -0.31
TM2D1-209ENST00000488410 PRKAR2BP31323 418 aa13.09□□□□□ -0.31
TM2D1-209ENST00000488410 U2AF1Q01081 240 aaKnown RBP eCLIP13.09□□□□□ -0.31
TM2D1-209ENST00000488410 CCDC88AQ3V6T2 1871 aa13.09□□□□□ -0.31
TM2D1-209ENST00000488410 TTLL6Q8N841 843 aa13.09□□□□□ -0.31
TM2D1-209ENST00000488410 ZNF496Q96IT1 587 aaPredicted RBP13.09□□□□□ -0.31
TM2D1-209ENST00000488410 RRAGCQ9HB90 399 aa13.09□□□□□ -0.31
TM2D1-209ENST00000488410 SBF1O95248 1867 aa13.08□□□□□ -0.32
TM2D1-209ENST00000488410 NEFMP07197 916 aa13.08□□□□□ -0.32
TM2D1-209ENST00000488410 A1BGP04217 495 aa13.07□□□□□ -0.32
TM2D1-209ENST00000488410 PDE6BP35913 854 aa13.07□□□□□ -0.32
TM2D1-209ENST00000488410 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
TM2D1-209ENST00000488410 PHACTR3Q96KR7 559 aa13.07□□□□□ -0.32
TM2D1-209ENST00000488410 SETDB2Q96T68 719 aa13.07□□□□□ -0.32
TM2D1-209ENST00000488410 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
TM2D1-209ENST00000488410 KCPQ6ZWJ8 1503 aa13.07□□□□□ -0.32
TM2D1-209ENST00000488410 NPC1L1Q9UHC9 1359 aa13.07□□□□□ -0.32
TM2D1-209ENST00000488410 MRC1P22897 1456 aa13.06□□□□□ -0.32
TM2D1-209ENST00000488410 TBC1D9BQ66K14 1250 aa13.06□□□□□ -0.32
TM2D1-209ENST00000488410 BCL2L12Q9HB09 334 aa13.06□□□□□ -0.32
TM2D1-209ENST00000488410 HEG1Q9ULI3 1381 aa13.06□□□□□ -0.32
TM2D1-209ENST00000488410 LMNB1P20700 586 aa13.05□□□□□ -0.32
TM2D1-209ENST00000488410 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
TM2D1-209ENST00000488410 RASSF7Q02833 373 aa13.05□□□□□ -0.32
TM2D1-209ENST00000488410 CCDC24Q8N4L8 307 aa13.05□□□□□ -0.32
TM2D1-209ENST00000488410 RBM46Q8TBY0 533 aaKnown RBP13.05□□□□□ -0.32
TM2D1-209ENST00000488410 PDZRN3Q9UPQ7 1066 aa13.05□□□□□ -0.32
TM2D1-209ENST00000488410 UBR2Q8IWV8 1755 aa13.04□□□□□ -0.32
TM2D1-209ENST00000488410 KCNQ3O43525 872 aa13.04□□□□□ -0.32
TM2D1-209ENST00000488410 PPP2R1AP30153 589 aa13.04□□□□□ -0.32
TM2D1-209ENST00000488410 BRIP1Q9BX63 1249 aa13.04□□□□□ -0.32
TM2D1-209ENST00000488410 ADAMTS7Q9UKP4 1686 aa13.04□□□□□ -0.32
TM2D1-209ENST00000488410 ST5P78524 1137 aa13.03□□□□□ -0.32
TM2D1-209ENST00000488410 FSTL1Q12841 308 aa13.03□□□□□ -0.32
TM2D1-209ENST00000488410 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
TM2D1-209ENST00000488410 MCM10Q7L590 875 aa13.03□□□□□ -0.32
TM2D1-209ENST00000488410 DZIP3Q86Y13 1208 aaKnown RBP13.03□□□□□ -0.32
TM2D1-209ENST00000488410 RSPH6AQ9H0K4 717 aa13.03□□□□□ -0.32
TM2D1-209ENST00000488410 C21orf2O43822 256 aa13.02□□□□□ -0.33
TM2D1-209ENST00000488410 SNRPA1P09661 255 aaKnown RBP13.02□□□□□ -0.33
TM2D1-209ENST00000488410 PIP4K2AP48426 406 aaPredicted RBP13.02□□□□□ -0.33
TM2D1-209ENST00000488410 IFFO2Q5TF58 517 aa13.02□□□□□ -0.33
TM2D1-209ENST00000488410 CNBD1Q8NA66 436 aa13.02□□□□□ -0.33
TM2D1-209ENST00000488410 ZNF652Q9Y2D9 606 aa13.02□□□□□ -0.33
TM2D1-209ENST00000488410 USP16Q9Y5T5 823 aa13.02□□□□□ -0.33
TM2D1-209ENST00000488410 VEGFAP15692 232 aaPredicted RBP13.01□□□□□ -0.33
TM2D1-209ENST00000488410 GTF2E1P29083 439 aaPredicted RBP13.01□□□□□ -0.33
TM2D1-209ENST00000488410 PRR5LQ6MZQ0 368 aa13.01□□□□□ -0.33
TM2D1-209ENST00000488410 NBPF5PQ86XG9 351 aaPredicted RBP13.01□□□□□ -0.33
TM2D1-209ENST00000488410 SMC1BQ8NDV3 1235 aa13.01□□□□□ -0.33
TM2D1-209ENST00000488410 CNKSR1Q969H4 720 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms