RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 DPEP1P16444 411 aa15.09■□□□□ 0.01
VAMP7-206ENST00000488344 TEFQ10587 303 aa15.09■□□□□ 0.01
VAMP7-206ENST00000488344 FKBP8Q14318 412 aa15.09■□□□□ 0.01
VAMP7-206ENST00000488344 CHRDL2Q6WN34 429 aa15.09■□□□□ 0.01
VAMP7-206ENST00000488344 PIM2Q9P1W9 311 aa15.09■□□□□ 0.01
VAMP7-206ENST00000488344 SRP68Q9UHB9 627 aaKnown RBP15.09■□□□□ 0.01
VAMP7-206ENST00000488344 NUDCQ9Y266 331 aa15.09■□□□□ 0.01
VAMP7-206ENST00000488344 GNAT3A8MTJ3 354 aa15.08■□□□□ 0
VAMP7-206ENST00000488344 MYCNP04198 464 aaPredicted RBP15.08■□□□□ 0
VAMP7-206ENST00000488344 SLC39A6Q13433 755 aa15.08■□□□□ 0
VAMP7-206ENST00000488344 ZNF526Q8TF50 670 aaPredicted RBP15.08■□□□□ 0
VAMP7-206ENST00000488344 TEX13AQ9BXU3 409 aaPredicted RBP15.08■□□□□ 0
VAMP7-206ENST00000488344 TJP1Q07157 1748 aa15.08■□□□□ 0
VAMP7-206ENST00000488344 COL15A1P39059 1388 aa15.08■□□□□ 0
VAMP7-206ENST00000488344 KIF13BQ9NQT8 1826 aa15.08■□□□□ 0
VAMP7-206ENST00000488344 COL3A1P02461 1466 aaPredicted RBP15.08■□□□□ 0
VAMP7-206ENST00000488344 ARHGAP27Q6ZUM4 889 aa15.07■□□□□ 0
VAMP7-206ENST00000488344 NARFQ9UHQ1 456 aa15.07■□□□□ 0
VAMP7-206ENST00000488344 KCPQ6ZWJ8 1503 aa15.07■□□□□ 0
VAMP7-206ENST00000488344 A0A087WZG4 1122 aa15.06■□□□□ 0
VAMP7-206ENST00000488344 POLRMTO00411 1230 aaKnown RBP15.06■□□□□ 0
VAMP7-206ENST00000488344 TM4SF1P30408 202 aa15.06■□□□□ 0
VAMP7-206ENST00000488344 DDR1Q08345 913 aa15.06■□□□□ 0
VAMP7-206ENST00000488344 DALRD3Q5D0E6 543 aaKnown RBP15.06■□□□□ 0
VAMP7-206ENST00000488344 USPL1Q5W0Q7 1092 aa15.06■□□□□ 0
VAMP7-206ENST00000488344 ADAMTS7Q9UKP4 1686 aa15.06■□□□□ 0
VAMP7-206ENST00000488344 CNGB1Q14028 1251 aaPredicted RBP15.05■□□□□ -0
VAMP7-206ENST00000488344 NPM2Q86SE8 214 aaKnown RBP15.05■□□□□ -0
VAMP7-206ENST00000488344 ZBTB1Q9Y2K1 713 aa15.05■□□□□ -0
VAMP7-206ENST00000488344 ZNF790Q6PG37 636 aa15.04■□□□□ -0
VAMP7-206ENST00000488344 KCNA3P22001 575 aa15.03■□□□□ -0
VAMP7-206ENST00000488344 FMNL2Q96PY5 1086 aa15.03■□□□□ -0
VAMP7-206ENST00000488344 MYH14Q7Z406 1995 aaKnown RBP15.03■□□□□ -0
VAMP7-206ENST00000488344 KIAA1551Q9HCM1 1747 aa15.03■□□□□ -0
VAMP7-206ENST00000488344 HEG1Q9ULI3 1381 aa15.02■□□□□ -0
VAMP7-206ENST00000488344 HSPA6P17066 643 aa15.02■□□□□ -0
VAMP7-206ENST00000488344 CANXP27824 592 aaKnown RBP15.02■□□□□ -0
VAMP7-206ENST00000488344 PRKAR2BP31323 418 aa15.02■□□□□ -0
VAMP7-206ENST00000488344 NFIXQ14938 502 aa15.02■□□□□ -0
VAMP7-206ENST00000488344 CEMIPQ8WUJ3 1361 aa15.01□□□□□ -0.01
VAMP7-206ENST00000488344 IL17REQ8NFR9 667 aa15.01□□□□□ -0.01
VAMP7-206ENST00000488344 RTF1Q92541 710 aaKnown RBP15.01□□□□□ -0.01
VAMP7-206ENST00000488344 ZNF496Q96IT1 587 aaPredicted RBP15.01□□□□□ -0.01
VAMP7-206ENST00000488344 RSPH6AQ9H0K4 717 aa15.01□□□□□ -0.01
VAMP7-206ENST00000488344 PDZRN3Q9UPQ7 1066 aa15.01□□□□□ -0.01
VAMP7-206ENST00000488344 KIF3CO14782 793 aa15□□□□□ -0.01
VAMP7-206ENST00000488344 SERPINB2P05120 415 aa15□□□□□ -0.01
VAMP7-206ENST00000488344 CHRNA5P30532 468 aa15□□□□□ -0.01
VAMP7-206ENST00000488344 EIF5P55010 431 aaKnown RBP15□□□□□ -0.01
VAMP7-206ENST00000488344 C9orf131Q5VYM1 1079 aa15□□□□□ -0.01
VAMP7-206ENST00000488344 N4BP2Q86UW6 1770 aaPredicted RBP15□□□□□ -0.01
VAMP7-206ENST00000488344 KDM2BQ8NHM5 1336 aa14.99□□□□□ -0.01
VAMP7-206ENST00000488344 BTBD11A6QL63 1104 aa14.99□□□□□ -0.01
VAMP7-206ENST00000488344 TOMM70O94826 608 aa14.99□□□□□ -0.01
VAMP7-206ENST00000488344 NEFMP07197 916 aa14.99□□□□□ -0.01
VAMP7-206ENST00000488344 U2AF1L5P0DN76 240 aaPredicted RBP14.99□□□□□ -0.01
VAMP7-206ENST00000488344 IL6STP40189 918 aaPredicted RBP14.99□□□□□ -0.01
VAMP7-206ENST00000488344 U2AF1Q01081 240 aaKnown RBP eCLIP14.99□□□□□ -0.01
VAMP7-206ENST00000488344 ZC3H4Q9UPT8 1303 aaKnown RBP14.98□□□□□ -0.01
VAMP7-206ENST00000488344 PPP2R1AP30153 589 aa14.98□□□□□ -0.01
VAMP7-206ENST00000488344 TTLL6Q8N841 843 aa14.98□□□□□ -0.01
VAMP7-206ENST00000488344 RNF181Q9P0P0 153 aa14.98□□□□□ -0.01
VAMP7-206ENST00000488344 UBR2Q8IWV8 1755 aa14.98□□□□□ -0.01
VAMP7-206ENST00000488344 H0YIN7 160 aa14.97□□□□□ -0.01
VAMP7-206ENST00000488344 HTATSF1O43719 755 aaKnown RBP14.97□□□□□ -0.01
VAMP7-206ENST00000488344 C16orf71Q8IYS4 520 aaPredicted RBP14.97□□□□□ -0.01
VAMP7-206ENST00000488344 BCL2L12Q9HB09 334 aa14.97□□□□□ -0.01
VAMP7-206ENST00000488344 ZNF330Q9Y3S2 320 aaPredicted RBP14.97□□□□□ -0.01
VAMP7-206ENST00000488344 CARMIL3Q8ND23 1372 aa14.97□□□□□ -0.01
VAMP7-206ENST00000488344 PDE6BP35913 854 aa14.96□□□□□ -0.01
VAMP7-206ENST00000488344 BICDL1Q6ZP65 573 aa14.96□□□□□ -0.01
VAMP7-206ENST00000488344 PHACTR3Q96KR7 559 aa14.96□□□□□ -0.01
VAMP7-206ENST00000488344 NPHP1O15259 732 aa14.95□□□□□ -0.02
VAMP7-206ENST00000488344 APLP1P51693 650 aa14.95□□□□□ -0.02
VAMP7-206ENST00000488344 C2CD5Q86YS7 1000 aa14.95□□□□□ -0.02
VAMP7-206ENST00000488344 BRCA1P38398 1863 aaKnown RBP14.95□□□□□ -0.02
VAMP7-206ENST00000488344 ARFGEF1Q9Y6D6 1849 aa14.94□□□□□ -0.02
VAMP7-206ENST00000488344 SNRPA1P09661 255 aaKnown RBP14.94□□□□□ -0.02
VAMP7-206ENST00000488344 LMNB1P20700 586 aa14.94□□□□□ -0.02
VAMP7-206ENST00000488344 RBM46Q8TBY0 533 aaKnown RBP14.94□□□□□ -0.02
VAMP7-206ENST00000488344 SETDB2Q96T68 719 aa14.94□□□□□ -0.02
VAMP7-206ENST00000488344 BRIP1Q9BX63 1249 aa14.94□□□□□ -0.02
VAMP7-206ENST00000488344 FOXD4L1Q9NU39 408 aa14.94□□□□□ -0.02
VAMP7-206ENST00000488344 ZNF652Q9Y2D9 606 aa14.94□□□□□ -0.02
VAMP7-206ENST00000488344 NRXN2Q9P2S2 1712 aa14.93□□□□□ -0.02
VAMP7-206ENST00000488344 ST5P78524 1137 aa14.93□□□□□ -0.02
VAMP7-206ENST00000488344 TBC1D9BQ66K14 1250 aa14.93□□□□□ -0.02
VAMP7-206ENST00000488344 DZIP3Q86Y13 1208 aaKnown RBP14.93□□□□□ -0.02
VAMP7-206ENST00000488344 NMRK2Q9NPI5 230 aa14.93□□□□□ -0.02
VAMP7-206ENST00000488344 TBC1D2BQ9UPU7 963 aa14.93□□□□□ -0.02
VAMP7-206ENST00000488344 RGL2O15211 777 aa14.92□□□□□ -0.02
VAMP7-206ENST00000488344 A1BGP04217 495 aa14.92□□□□□ -0.02
VAMP7-206ENST00000488344 CLEC4GQ6UXB4 293 aa14.92□□□□□ -0.02
VAMP7-206ENST00000488344 CNBD1Q8NA66 436 aa14.92□□□□□ -0.02
VAMP7-206ENST00000488344 PNNQ9H307 717 aaKnown RBP14.92□□□□□ -0.02
VAMP7-206ENST00000488344 SCN7AQ01118 1682 aa14.91□□□□□ -0.02
VAMP7-206ENST00000488344 CAMTA2O94983 1202 aa14.91□□□□□ -0.02
VAMP7-206ENST00000488344 FSTL1Q12841 308 aa14.91□□□□□ -0.02
VAMP7-206ENST00000488344 MCM10Q7L590 875 aa14.91□□□□□ -0.02
VAMP7-206ENST00000488344 PNISRQ8TF01 805 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms