RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 SVOPQ8N4V2 548 aa9.17□□□□□ -0.94
BRCA1-217ENST00000487825 TFIP11Q9UBB9 837 aaKnown RBP9.17□□□□□ -0.94
BRCA1-217ENST00000487825 KIAA1024Q9UPX6 916 aa9.17□□□□□ -0.94
BRCA1-217ENST00000487825 FANCD2Q9BXW9 1451 aa9.16□□□□□ -0.94
BRCA1-217ENST00000487825 CDK2AP1O14519 115 aa9.16□□□□□ -0.94
BRCA1-217ENST00000487825 CLDN10P78369 228 aa9.16□□□□□ -0.94
BRCA1-217ENST00000487825 MTFR1Q15390 333 aa9.16□□□□□ -0.94
BRCA1-217ENST00000487825 ZNF385CQ66K41 422 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-217ENST00000487825 TPCN2Q8NHX9 752 aa9.16□□□□□ -0.94
BRCA1-217ENST00000487825 CABP1Q9NZU7 370 aa9.16□□□□□ -0.94
BRCA1-217ENST00000487825 MKRN1Q9UHC7 482 aaKnown RBP9.16□□□□□ -0.94
BRCA1-217ENST00000487825 ZBTB7BO15156 539 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-217ENST00000487825 ATP1A2P50993 1020 aa9.15□□□□□ -0.94
BRCA1-217ENST00000487825 SRSF11Q05519 484 aaKnown RBP9.15□□□□□ -0.94
BRCA1-217ENST00000487825 OGFOD1Q8N543 542 aa9.15□□□□□ -0.94
BRCA1-217ENST00000487825 MBIPQ9NS73 344 aa9.15□□□□□ -0.94
BRCA1-217ENST00000487825 IQSEC3Q9UPP2 1182 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-217ENST00000487825 PARP3Q9Y6F1 533 aa9.15□□□□□ -0.94
BRCA1-217ENST00000487825 URB2Q14146 1524 aaKnown RBP9.15□□□□□ -0.95
BRCA1-217ENST00000487825 IGF1RP08069 1367 aa9.14□□□□□ -0.95
BRCA1-217ENST00000487825 EFHC2Q5JST6 749 aa9.14□□□□□ -0.95
BRCA1-217ENST00000487825 TBCELQ5QJ74 424 aa9.14□□□□□ -0.95
BRCA1-217ENST00000487825 CCDC102BQ68D86 513 aa9.14□□□□□ -0.95
BRCA1-217ENST00000487825 TNS4Q8IZW8 715 aa9.14□□□□□ -0.95
BRCA1-217ENST00000487825 DNAAF2Q9NVR5 837 aaKnown RBP9.14□□□□□ -0.95
BRCA1-217ENST00000487825 PALM3A6NDB9 673 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-217ENST00000487825 MX2P20592 715 aa9.13□□□□□ -0.95
BRCA1-217ENST00000487825 LYPD4Q6UWN0 246 aa9.13□□□□□ -0.95
BRCA1-217ENST00000487825 ZNF295-AS1Q8N0V1 137 aa9.13□□□□□ -0.95
BRCA1-217ENST00000487825 ZNF594Q96JF6 807 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-217ENST00000487825 SCHIP1Q9P0W5 487 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-217ENST00000487825 ZNF777Q9ULD5 760 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-217ENST00000487825 MAFBQ9Y5Q3 323 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-217ENST00000487825 ATP4AP20648 1035 aa9.12□□□□□ -0.95
BRCA1-217ENST00000487825 UBAP2LQ14157 1087 aaKnown RBP9.12□□□□□ -0.95
BRCA1-217ENST00000487825 ARSJQ5FYB0 599 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-217ENST00000487825 ADAMTS8Q9UP79 889 aa9.12□□□□□ -0.95
BRCA1-217ENST00000487825 RSF1Q96T23 1441 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-217ENST00000487825 PRDM2Q13029 1718 aa9.11□□□□□ -0.95
BRCA1-217ENST00000487825 NBPF1Q3BBV0 1214 aa9.11□□□□□ -0.95
BRCA1-217ENST00000487825 PPP1R12CQ9BZL4 782 aa9.11□□□□□ -0.95
BRCA1-217ENST00000487825 CRISPLD1Q9H336 500 aa9.11□□□□□ -0.95
BRCA1-217ENST00000487825 EIF4G3O43432 1585 aaKnown RBP9.11□□□□□ -0.95
BRCA1-217ENST00000487825 ZNF608Q9ULD9 1512 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-217ENST00000487825 SFI1A8K8P3 1242 aa9.1□□□□□ -0.95
BRCA1-217ENST00000487825 RASA1P20936 1047 aa9.1□□□□□ -0.95
BRCA1-217ENST00000487825 EPHA4P54764 986 aa9.1□□□□□ -0.95
BRCA1-217ENST00000487825 LBRQ14739 615 aaKnown RBP9.1□□□□□ -0.95
BRCA1-217ENST00000487825 SLC9A9Q8IVB4 645 aa9.1□□□□□ -0.95
BRCA1-217ENST00000487825 LARGE2Q8N3Y3 721 aa9.1□□□□□ -0.95
BRCA1-217ENST00000487825 C1orf216Q8TAB5 229 aa9.1□□□□□ -0.95
BRCA1-217ENST00000487825 ABHD17AQ96GS6 310 aa9.1□□□□□ -0.95
BRCA1-217ENST00000487825 CFHR5Q9BXR6 569 aa9.1□□□□□ -0.95
BRCA1-217ENST00000487825 PHF24Q9UPV7 400 aa9.1□□□□□ -0.95
BRCA1-217ENST00000487825 MROH2BQ7Z745 1585 aa9.1□□□□□ -0.95
BRCA1-217ENST00000487825 ARHGEF15O94989 841 aa9.09□□□□□ -0.95
BRCA1-217ENST00000487825 CELA2BP08218 269 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-217ENST00000487825 FOXK2Q01167 660 aa9.09□□□□□ -0.95
BRCA1-217ENST00000487825 ZDHHC1Q8WTX9 485 aa9.09□□□□□ -0.95
BRCA1-217ENST00000487825 L3MBTL2Q969R5 705 aa9.09□□□□□ -0.95
BRCA1-217ENST00000487825 ZCCHC2Q9C0B9 1178 aaKnown RBP9.09□□□□□ -0.95
BRCA1-217ENST00000487825 NSFL1CQ9UNZ2 370 aaKnown RBP9.09□□□□□ -0.95
BRCA1-217ENST00000487825 A0A1W2PNR3 127 aa9.08□□□□□ -0.96
BRCA1-217ENST00000487825 BNIP3LO60238 219 aa9.08□□□□□ -0.96
BRCA1-217ENST00000487825 TATP17735 454 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-217ENST00000487825 MAP3K10Q02779 954 aa9.08□□□□□ -0.96
BRCA1-217ENST00000487825 TSEN2Q8NCE0 465 aaKnown RBP9.08□□□□□ -0.96
BRCA1-217ENST00000487825 ACDQ96AP0 544 aa9.08□□□□□ -0.96
BRCA1-217ENST00000487825 ZNF232Q9UNY5 417 aa9.08□□□□□ -0.96
BRCA1-217ENST00000487825 RBM19Q9Y4C8 960 aaKnown RBP9.08□□□□□ -0.96
BRCA1-217ENST00000487825 LMOD1P29536 600 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-217ENST00000487825 NOS2P35228 1153 aa9.07□□□□□ -0.96
BRCA1-217ENST00000487825 TXLNAP40222 546 aa9.07□□□□□ -0.96
BRCA1-217ENST00000487825 BICDL1Q6ZP65 573 aa9.07□□□□□ -0.96
BRCA1-217ENST00000487825 SIX5Q8N196 739 aa9.07□□□□□ -0.96
BRCA1-217ENST00000487825 TSPAN10Q9H1Z9 355 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-217ENST00000487825 ATXN7L1Q9ULK2 861 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-217ENST00000487825 IFT140Q96RY7 1462 aa9.07□□□□□ -0.96
BRCA1-217ENST00000487825 TEAD4Q15561 434 aa9.06□□□□□ -0.96
BRCA1-217ENST00000487825 SH3PXD2AQ5TCZ1 1133 aa9.06□□□□□ -0.96
BRCA1-217ENST00000487825 FIGNL1Q6PIW4 674 aa9.06□□□□□ -0.96
BRCA1-217ENST00000487825 LARP1Q6PKG0 1096 aaKnown RBP9.06□□□□□ -0.96
BRCA1-217ENST00000487825 NLRP8Q86W28 1048 aa9.06□□□□□ -0.96
BRCA1-217ENST00000487825 ZIC5Q96T25 663 aa9.06□□□□□ -0.96
BRCA1-217ENST00000487825 ZDHHC3Q9NYG2 299 aa9.06□□□□□ -0.96
BRCA1-217ENST00000487825 GJA3Q9Y6H8 435 aa9.06□□□□□ -0.96
BRCA1-217ENST00000487825 CFTRP13569 1480 aa9.06□□□□□ -0.96
BRCA1-217ENST00000487825 DKK1O94907 266 aa9.05□□□□□ -0.96
BRCA1-217ENST00000487825 BCRP11274 1271 aa9.05□□□□□ -0.96
BRCA1-217ENST00000487825 FGFR3P22607 806 aa9.05□□□□□ -0.96
BRCA1-217ENST00000487825 CTBSQ01459 385 aa9.05□□□□□ -0.96
BRCA1-217ENST00000487825 KANK4Q5T7N3 995 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-217ENST00000487825 NDFIP2Q9NV92 336 aa9.05□□□□□ -0.96
BRCA1-217ENST00000487825 PCDHGC4Q9Y5F7 938 aa9.05□□□□□ -0.96
BRCA1-217ENST00000487825 SERTM1A2A2V5 107 aa9.04□□□□□ -0.96
BRCA1-217ENST00000487825 DCDC2BA2VCK2 349 aa9.04□□□□□ -0.96
BRCA1-217ENST00000487825 C2CD2LO14523 706 aa9.04□□□□□ -0.96
BRCA1-217ENST00000487825 ATXN7O15265 892 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-217ENST00000487825 BMP4P12644 408 aa9.04□□□□□ -0.96
BRCA1-217ENST00000487825 MAP2K3P46734 347 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms