RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 CGNL1Q0VF96 1302 aa8.43□□□□□ -1.06
COL4A3-206ENST00000487633 MAP1SQ66K74 1059 aaPredicted RBP8.42□□□□□ -1.06
COL4A3-206ENST00000487633 CYP4F22Q6NT55 531 aa8.42□□□□□ -1.06
COL4A3-206ENST00000487633 L3MBTL2Q969R5 705 aa8.42□□□□□ -1.06
COL4A3-206ENST00000487633 TAF1DQ9H5J8 278 aaPredicted RBP8.42□□□□□ -1.06
COL4A3-206ENST00000487633 BCL2L12Q9HB09 334 aa8.42□□□□□ -1.06
COL4A3-206ENST00000487633 CNTNAP4Q9C0A0 1308 aa8.42□□□□□ -1.06
COL4A3-206ENST00000487633 NCAPD2Q15021 1401 aa8.42□□□□□ -1.06
COL4A3-206ENST00000487633 TRPM7Q96QT4 1865 aa8.41□□□□□ -1.06
COL4A3-206ENST00000487633 RTL1A6NKG5 1358 aa8.41□□□□□ -1.06
COL4A3-206ENST00000487633 C21orf2O43822 256 aa8.41□□□□□ -1.06
COL4A3-206ENST00000487633 PHKG2P15735 406 aa8.41□□□□□ -1.06
COL4A3-206ENST00000487633 GRM1Q13255 1194 aa8.41□□□□□ -1.06
COL4A3-206ENST00000487633 NFIXQ14938 502 aa8.41□□□□□ -1.06
COL4A3-206ENST00000487633 ERFEQ4G0M1 354 aa8.41□□□□□ -1.06
COL4A3-206ENST00000487633 RC3H1Q5TC82 1133 aaKnown RBP8.41□□□□□ -1.06
COL4A3-206ENST00000487633 USPL1Q5W0Q7 1092 aa8.41□□□□□ -1.06
COL4A3-206ENST00000487633 GGNBP2Q9H3C7 697 aa8.41□□□□□ -1.06
COL4A3-206ENST00000487633 INSRP06213 1382 aa8.4□□□□□ -1.06
COL4A3-206ENST00000487633 ZNF541Q9H0D2 1346 aa8.4□□□□□ -1.06
COL4A3-206ENST00000487633 ADRA2BP18089 450 aa8.4□□□□□ -1.06
COL4A3-206ENST00000487633 CRKLP46109 303 aaKnown RBP8.4□□□□□ -1.06
COL4A3-206ENST00000487633 EAPPQ56P03 285 aaPredicted RBP8.4□□□□□ -1.06
COL4A3-206ENST00000487633 DPY19L2Q6NUT2 758 aa8.4□□□□□ -1.06
COL4A3-206ENST00000487633 INTS5Q6P9B9 1019 aaKnown RBP8.4□□□□□ -1.06
COL4A3-206ENST00000487633 HDGFL2Q7Z4V5 671 aaPredicted RBP8.4□□□□□ -1.06
COL4A3-206ENST00000487633 LDHDQ86WU2 507 aa8.4□□□□□ -1.06
COL4A3-206ENST00000487633 COG3Q96JB2 828 aa8.4□□□□□ -1.06
COL4A3-206ENST00000487633 ZIC5Q96T25 663 aa8.4□□□□□ -1.06
COL4A3-206ENST00000487633 EMILIN1Q9Y6C2 1016 aa8.4□□□□□ -1.06
COL4A3-206ENST00000487633 SZT2Q5T011 3432 aa8.39□□□□□ -1.07
COL4A3-206ENST00000487633 KIF20BQ96Q89 1820 aa8.39□□□□□ -1.07
COL4A3-206ENST00000487633 MAP2K1Q02750 393 aaPredicted RBP8.39□□□□□ -1.07
COL4A3-206ENST00000487633 C2CD5Q86YS7 1000 aa8.39□□□□□ -1.07
COL4A3-206ENST00000487633 TTLL6Q8N841 843 aa8.39□□□□□ -1.07
COL4A3-206ENST00000487633 ARFGEF2Q9Y6D5 1785 aa8.38□□□□□ -1.07
COL4A3-206ENST00000487633 ROCK2O75116 1388 aaKnown RBP8.38□□□□□ -1.07
COL4A3-206ENST00000487633 MKI67P46013 3256 aaKnown RBP8.38□□□□□ -1.07
COL4A3-206ENST00000487633 COL4A5P29400 1685 aa8.38□□□□□ -1.07
COL4A3-206ENST00000487633 FYB1O15117 783 aa8.38□□□□□ -1.07
COL4A3-206ENST00000487633 PTCD1O75127 700 aaKnown RBP8.38□□□□□ -1.07
COL4A3-206ENST00000487633 DGKZQ13574 1117 aa8.38□□□□□ -1.07
COL4A3-206ENST00000487633 CST9Q5W186 159 aa8.38□□□□□ -1.07
COL4A3-206ENST00000487633 OLFM4Q6UX06 510 aa8.38□□□□□ -1.07
COL4A3-206ENST00000487633 CNTROBQ8N137 903 aa8.38□□□□□ -1.07
COL4A3-206ENST00000487633 CAPNS2Q96L46 248 aa8.38□□□□□ -1.07
COL4A3-206ENST00000487633 ABT1Q9ULW3 272 aaKnown RBP8.38□□□□□ -1.07
COL4A3-206ENST00000487633 SCN11AQ9UI33 1791 aa8.38□□□□□ -1.07
COL4A3-206ENST00000487633 ANKRD26Q9UPS8 1709 aa8.37□□□□□ -1.07
COL4A3-206ENST00000487633 RNF123Q5XPI4 1314 aa8.37□□□□□ -1.07
COL4A3-206ENST00000487633 TRAF5O00463 557 aa8.37□□□□□ -1.07
COL4A3-206ENST00000487633 SERPINB2P05120 415 aa8.37□□□□□ -1.07
COL4A3-206ENST00000487633 PRPF38BQ5VTL8 546 aaKnown RBP8.37□□□□□ -1.07
COL4A3-206ENST00000487633 SLC51AQ86UW1 340 aa8.37□□□□□ -1.07
COL4A3-206ENST00000487633 GPR101Q96P66 508 aaPredicted RBP8.37□□□□□ -1.07
COL4A3-206ENST00000487633 EYA1Q99502 592 aa8.37□□□□□ -1.07
COL4A3-206ENST00000487633 CLEC11AQ9Y240 323 aa8.37□□□□□ -1.07
COL4A3-206ENST00000487633 PAXIP1Q6ZW49 1069 aaPredicted RBP8.36□□□□□ -1.07
COL4A3-206ENST00000487633 L3MBTL3Q96JM7 780 aaPredicted RBP8.36□□□□□ -1.07
COL4A3-206ENST00000487633 SIN3AQ96ST3 1273 aa8.36□□□□□ -1.07
COL4A3-206ENST00000487633 DDX21Q9NR30 783 aaKnown RBP eCLIP8.36□□□□□ -1.07
COL4A3-206ENST00000487633 SMG6Q86US8 1419 aaKnown RBP8.36□□□□□ -1.07
COL4A3-206ENST00000487633 TONSLQ96HA7 1378 aa8.35□□□□□ -1.07
COL4A3-206ENST00000487633 HMGB2P26583 209 aaKnown RBP8.35□□□□□ -1.07
COL4A3-206ENST00000487633 EPHX2P34913 555 aa8.35□□□□□ -1.07
COL4A3-206ENST00000487633 BICDL1Q6ZP65 573 aa8.35□□□□□ -1.07
COL4A3-206ENST00000487633 DNAJC10Q8IXB1 793 aa8.35□□□□□ -1.07
COL4A3-206ENST00000487633 IFNL2Q8IZJ0 200 aa8.35□□□□□ -1.07
COL4A3-206ENST00000487633 ZNF622Q969S3 477 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL4A3-206ENST00000487633 TERF2IPQ9NYB0 399 aa8.35□□□□□ -1.07
COL4A3-206ENST00000487633 SPG7Q9UQ90 795 aa8.35□□□□□ -1.07
COL4A3-206ENST00000487633 FLT4P35916 1363 aa8.35□□□□□ -1.07
COL4A3-206ENST00000487633 SOS1Q07889 1333 aaPredicted RBP8.34□□□□□ -1.07
COL4A3-206ENST00000487633 TAOK3Q9H2K8 898 aa8.34□□□□□ -1.07
COL4A3-206ENST00000487633 H0YIN7 160 aa8.33□□□□□ -1.08
COL4A3-206ENST00000487633 DLK2Q6UY11 383 aa8.33□□□□□ -1.08
COL4A3-206ENST00000487633 ZBTB1Q9Y2K1 713 aa8.33□□□□□ -1.08
COL4A3-206ENST00000487633 LTBP3Q9NS15 1303 aa8.32□□□□□ -1.08
COL4A3-206ENST00000487633 TBC1D9BQ66K14 1250 aa8.32□□□□□ -1.08
COL4A3-206ENST00000487633 CIAPIN1Q6FI81 312 aa8.32□□□□□ -1.08
COL4A3-206ENST00000487633 TESK2Q96S53 571 aa8.32□□□□□ -1.08
COL4A3-206ENST00000487633 ZNF277Q9NRM2 450 aaPredicted RBP8.32□□□□□ -1.08
COL4A3-206ENST00000487633 NARFQ9UHQ1 456 aa8.32□□□□□ -1.08
COL4A3-206ENST00000487633 HACL1Q9UJ83 578 aa8.32□□□□□ -1.08
COL4A3-206ENST00000487633 TLL2Q9Y6L7 1015 aa8.32□□□□□ -1.08
COL4A3-206ENST00000487633 BRCA2P51587 3418 aa8.31□□□□□ -1.08
COL4A3-206ENST00000487633 BCORQ6W2J9 1755 aa8.31□□□□□ -1.08
COL4A3-206ENST00000487633 IQCA1LA6NCM1 817 aa8.31□□□□□ -1.08
COL4A3-206ENST00000487633 ERVV-2B6SEH9 535 aa8.31□□□□□ -1.08
COL4A3-206ENST00000487633 PPM1GO15355 546 aaPredicted RBP8.31□□□□□ -1.08
COL4A3-206ENST00000487633 HABP4Q5JVS0 413 aaKnown RBP8.31□□□□□ -1.08
COL4A3-206ENST00000487633 PRR5LQ6MZQ0 368 aa8.31□□□□□ -1.08
COL4A3-206ENST00000487633 NFATC2IPQ8NCF5 419 aa8.31□□□□□ -1.08
COL4A3-206ENST00000487633 C7orf43Q8WVR3 580 aa8.31□□□□□ -1.08
COL4A3-206ENST00000487633 COL15A1P39059 1388 aa8.31□□□□□ -1.08
COL4A3-206ENST00000487633 SCN7AQ01118 1682 aa8.3□□□□□ -1.08
COL4A3-206ENST00000487633 ZPR1O75312 459 aa8.3□□□□□ -1.08
COL4A3-206ENST00000487633 CYP19A1P11511 503 aaPredicted RBP8.3□□□□□ -1.08
COL4A3-206ENST00000487633 EPS15P42566 896 aa8.3□□□□□ -1.08
COL4A3-206ENST00000487633 SLC39A6Q13433 755 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms