RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 GTF3C3Q9Y5Q9 886 aa10.24□□□□□ -0.77
RBM28-206ENST00000487602 USP16Q9Y5T5 823 aa10.24□□□□□ -0.77
RBM28-206ENST00000487602 KIF16BQ96L93 1317 aa10.24□□□□□ -0.77
RBM28-206ENST00000487602 SBF2Q86WG5 1849 aa10.23□□□□□ -0.77
RBM28-206ENST00000487602 ZBTB22O15209 634 aa10.23□□□□□ -0.77
RBM28-206ENST00000487602 MS4A1P11836 297 aa10.23□□□□□ -0.77
RBM28-206ENST00000487602 ATF7IPQ6VMQ6 1270 aa10.23□□□□□ -0.77
RBM28-206ENST00000487602 RBM42Q9BTD8 480 aaKnown RBP10.23□□□□□ -0.77
RBM28-206ENST00000487602 TEX13AQ9BXU3 409 aaPredicted RBP10.23□□□□□ -0.77
RBM28-206ENST00000487602 U3KPZ7 1027 aaPredicted RBP10.23□□□□□ -0.77
RBM28-206ENST00000487602 KCPQ6ZWJ8 1503 aa10.23□□□□□ -0.77
RBM28-206ENST00000487602 C20orf194Q5TEA3 1177 aa10.22□□□□□ -0.77
RBM28-206ENST00000487602 ERICH6BQ5W0A0 696 aa10.22□□□□□ -0.77
RBM28-206ENST00000487602 G2E3Q7L622 706 aa10.22□□□□□ -0.77
RBM28-206ENST00000487602 SLC4A9Q96Q91 983 aa10.22□□□□□ -0.77
RBM28-206ENST00000487602 DBF4Q9UBU7 674 aaPredicted RBP10.22□□□□□ -0.77
RBM28-206ENST00000487602 TNNQ9UQP3 1299 aa10.22□□□□□ -0.77
RBM28-206ENST00000487602 TNS1Q9HBL0 1735 aaKnown RBP10.21□□□□□ -0.77
RBM28-206ENST00000487602 UBR2Q8IWV8 1755 aa10.21□□□□□ -0.77
RBM28-206ENST00000487602 TRIM27P14373 513 aa10.21□□□□□ -0.77
RBM28-206ENST00000487602 PDIA6Q15084 440 aa10.21□□□□□ -0.77
RBM28-206ENST00000487602 PTF1AQ7RTS3 328 aa10.21□□□□□ -0.77
RBM28-206ENST00000487602 DNAJC10Q8IXB1 793 aa10.21□□□□□ -0.77
RBM28-206ENST00000487602 DZIP1LQ8IYY4 767 aaKnown RBP10.21□□□□□ -0.77
RBM28-206ENST00000487602 API5Q9BZZ5 524 aaKnown RBP10.21□□□□□ -0.77
RBM28-206ENST00000487602 BCL11BQ9C0K0 894 aaPredicted RBP10.21□□□□□ -0.77
RBM28-206ENST00000487602 DDX21Q9NR30 783 aaKnown RBP eCLIP10.21□□□□□ -0.77
RBM28-206ENST00000487602 CHPF2Q9P2E5 772 aa10.21□□□□□ -0.77
RBM28-206ENST00000487602 PTPRCP08575 1304 aa10.21□□□□□ -0.78
RBM28-206ENST00000487602 LOC102724428A0A0B4J2F2 783 aa10.2□□□□□ -0.78
RBM28-206ENST00000487602 BTAF1O14981 1849 aa10.2□□□□□ -0.78
RBM28-206ENST00000487602 ANXA1P04083 346 aa10.2□□□□□ -0.78
RBM28-206ENST00000487602 RLBP1P12271 317 aa10.2□□□□□ -0.78
RBM28-206ENST00000487602 SIK1P57059 783 aa10.2□□□□□ -0.78
RBM28-206ENST00000487602 FLIIQ13045 1269 aa10.2□□□□□ -0.78
RBM28-206ENST00000487602 ERBB4Q15303 1308 aa10.2□□□□□ -0.78
RBM28-206ENST00000487602 PANK1Q8TE04 598 aa10.2□□□□□ -0.78
RBM28-206ENST00000487602 CLUAP1Q96AJ1 413 aa10.2□□□□□ -0.78
RBM28-206ENST00000487602 CRBNQ96SW2 442 aa10.2□□□□□ -0.78
RBM28-206ENST00000487602 PHAXQ9H814 394 aaKnown RBP10.2□□□□□ -0.78
RBM28-206ENST00000487602 HYPKQ9NX55 129 aa10.2□□□□□ -0.78
RBM28-206ENST00000487602 LAMB4A4D0S4 1761 aa10.19□□□□□ -0.78
RBM28-206ENST00000487602 CICQ96RK0 1608 aaPredicted RBP10.19□□□□□ -0.78
RBM28-206ENST00000487602 PALLDQ8WX93 1383 aa10.19□□□□□ -0.78
RBM28-206ENST00000487602 STARD3NLO95772 234 aa10.19□□□□□ -0.78
RBM28-206ENST00000487602 A1BGP04217 495 aa10.19□□□□□ -0.78
RBM28-206ENST00000487602 ATP6V1AP38606 617 aa10.19□□□□□ -0.78
RBM28-206ENST00000487602 PROSER3Q2NL68 480 aa10.19□□□□□ -0.78
RBM28-206ENST00000487602 FTSJ3Q8IY81 847 aaKnown RBP10.19□□□□□ -0.78
RBM28-206ENST00000487602 EXOC6Q8TAG9 804 aa10.19□□□□□ -0.78
RBM28-206ENST00000487602 RGPD3A6NKT7 1758 aaPredicted RBP10.19□□□□□ -0.78
RBM28-206ENST00000487602 RGPD4Q7Z3J3 1758 aa10.19□□□□□ -0.78
RBM28-206ENST00000487602 CACNA1FO60840 1977 aa10.18□□□□□ -0.78
RBM28-206ENST00000487602 NBPF26B4DH59 902 aa10.18□□□□□ -0.78
RBM28-206ENST00000487602 CYP19A1P11511 503 aaPredicted RBP10.18□□□□□ -0.78
RBM28-206ENST00000487602 FKBP5Q13451 457 aaPredicted RBP10.18□□□□□ -0.78
RBM28-206ENST00000487602 NBPF14Q5TI25 921 aa10.18□□□□□ -0.78
RBM28-206ENST00000487602 NBPF10Q6P3W6 841 aaKnown RBP10.18□□□□□ -0.78
RBM28-206ENST00000487602 LRP10Q7Z4F1 713 aa10.18□□□□□ -0.78
RBM28-206ENST00000487602 NBPF15Q8N660 670 aa10.18□□□□□ -0.78
RBM28-206ENST00000487602 COG6Q9Y2V7 657 aa10.18□□□□□ -0.78
RBM28-206ENST00000487602 ABCC4O15439 1325 aa10.17□□□□□ -0.78
RBM28-206ENST00000487602 TRIM37O94972 964 aa10.17□□□□□ -0.78
RBM28-206ENST00000487602 MYL6BP14649 208 aa10.17□□□□□ -0.78
RBM28-206ENST00000487602 ITPK1Q13572 414 aa10.17□□□□□ -0.78
RBM28-206ENST00000487602 MVPQ14764 893 aaKnown RBP10.17□□□□□ -0.78
RBM28-206ENST00000487602 TMEM57Q8N5G2 664 aa10.17□□□□□ -0.78
RBM28-206ENST00000487602 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
RBM28-206ENST00000487602 C5P01031 1676 aa10.17□□□□□ -0.78
RBM28-206ENST00000487602 F6X3S4 739 aa10.16□□□□□ -0.78
RBM28-206ENST00000487602 DDX58O95786 925 aaKnown RBP10.16□□□□□ -0.78
RBM28-206ENST00000487602 PIP4K2AP48426 406 aaPredicted RBP10.16□□□□□ -0.78
RBM28-206ENST00000487602 INTS3Q68E01 1043 aaKnown RBP10.16□□□□□ -0.78
RBM28-206ENST00000487602 KSR2Q6VAB6 950 aa10.16□□□□□ -0.78
RBM28-206ENST00000487602 COPS6Q7L5N1 327 aa10.16□□□□□ -0.78
RBM28-206ENST00000487602 XAGE3Q8WTP9 111 aa10.16□□□□□ -0.78
RBM28-206ENST00000487602 EP400Q96L91 3159 aa10.16□□□□□ -0.78
RBM28-206ENST00000487602 LY75O60449 1722 aa10.16□□□□□ -0.78
RBM28-206ENST00000487602 ZNF831Q5JPB2 1677 aa10.15□□□□□ -0.78
RBM28-206ENST00000487602 PI4KAP2A4QPH2 592 aa10.15□□□□□ -0.78
RBM28-206ENST00000487602 AIMP1Q12904 312 aaKnown RBP10.15□□□□□ -0.78
RBM28-206ENST00000487602 ITPRIPQ8IWB1 547 aa10.15□□□□□ -0.78
RBM28-206ENST00000487602 PI4KAP1Q8N8J0 262 aa10.15□□□□□ -0.78
RBM28-206ENST00000487602 DNAAF4Q8WXU2 420 aa10.15□□□□□ -0.78
RBM28-206ENST00000487602 PPP4R2Q9NY27 417 aa10.15□□□□□ -0.78
RBM28-206ENST00000487602 DDX19BQ9UMR2 479 aa10.15□□□□□ -0.78
RBM28-206ENST00000487602 TJP1Q07157 1748 aa10.15□□□□□ -0.78
RBM28-206ENST00000487602 IL6STP40189 918 aaPredicted RBP10.14□□□□□ -0.79
RBM28-206ENST00000487602 CRKLP46109 303 aaKnown RBP10.14□□□□□ -0.79
RBM28-206ENST00000487602 CCT4P50991 539 aaKnown RBP10.14□□□□□ -0.79
RBM28-206ENST00000487602 C1QBPQ07021 282 aaKnown RBP10.14□□□□□ -0.79
RBM28-206ENST00000487602 AAMPQ13685 434 aa10.14□□□□□ -0.79
RBM28-206ENST00000487602 INTS5Q6P9B9 1019 aaKnown RBP10.14□□□□□ -0.79
RBM28-206ENST00000487602 SLC4A10Q6U841 1118 aa10.14□□□□□ -0.79
RBM28-206ENST00000487602 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
RBM28-206ENST00000487602 LINC00116Q8NCU8 138 aa10.14□□□□□ -0.79
RBM28-206ENST00000487602 CCDC87Q9NVE4 849 aa10.14□□□□□ -0.79
RBM28-206ENST00000487602 CCNL1Q9UK58 526 aaPredicted RBP10.14□□□□□ -0.79
RBM28-206ENST00000487602 ZBTB1Q9Y2K1 713 aa10.14□□□□□ -0.79
RBM28-206ENST00000487602 MAP3K2Q9Y2U5 619 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms