RNA–Protein interactions for RNA: ENST00000487543.2

SPATA6-208, Transcript of spermatogenesis associated 6, humanhuman

TSL 5

Gene SPATA6, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA6-208ENST00000487543 LAMB4A4D0S4 1761 aa13.24□□□□□ -0.29
SPATA6-208ENST00000487543 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
SPATA6-208ENST00000487543 PALLDQ8WX93 1383 aa13.23□□□□□ -0.29
SPATA6-208ENST00000487543 KCNQ3O43525 872 aa13.23□□□□□ -0.29
SPATA6-208ENST00000487543 HOXB7P09629 217 aa13.23□□□□□ -0.29
SPATA6-208ENST00000487543 POLD1P28340 1107 aa13.23□□□□□ -0.29
SPATA6-208ENST00000487543 COL23A1Q86Y22 540 aaPredicted RBP13.23□□□□□ -0.29
SPATA6-208ENST00000487543 C8orf58Q8NAV2 365 aa13.23□□□□□ -0.29
SPATA6-208ENST00000487543 ZNF428Q96B54 188 aa13.23□□□□□ -0.29
SPATA6-208ENST00000487543 ATG3Q9NT62 314 aa13.23□□□□□ -0.29
SPATA6-208ENST00000487543 RCAN3Q9UKA8 241 aa13.23□□□□□ -0.29
SPATA6-208ENST00000487543 ASAP1Q9ULH1 1129 aa13.23□□□□□ -0.29
SPATA6-208ENST00000487543 HEG1Q9ULI3 1381 aa13.22□□□□□ -0.29
SPATA6-208ENST00000487543 C5P01031 1676 aa13.22□□□□□ -0.29
SPATA6-208ENST00000487543 PTCD1O75127 700 aaKnown RBP13.22□□□□□ -0.29
SPATA6-208ENST00000487543 SNRPA1P09661 255 aaKnown RBP13.22□□□□□ -0.29
SPATA6-208ENST00000487543 KRT24Q2M2I5 525 aa13.22□□□□□ -0.29
SPATA6-208ENST00000487543 ZNF496Q96IT1 587 aaPredicted RBP13.22□□□□□ -0.29
SPATA6-208ENST00000487543 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
SPATA6-208ENST00000487543 GOLGB1Q14789 3259 aaKnown RBP13.21□□□□□ -0.29
SPATA6-208ENST00000487543 TSPYL6Q8N831 410 aa13.21□□□□□ -0.29
SPATA6-208ENST00000487543 STK31Q9BXU1 1019 aa13.21□□□□□ -0.29
SPATA6-208ENST00000487543 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
SPATA6-208ENST00000487543 HDGFL1Q5TGJ6 251 aa13.2□□□□□ -0.3
SPATA6-208ENST00000487543 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
SPATA6-208ENST00000487543 SMC4Q9NTJ3 1288 aa13.2□□□□□ -0.3
SPATA6-208ENST00000487543 VAMP4O75379 141 aa13.19□□□□□ -0.3
SPATA6-208ENST00000487543 EIF2S2P20042 333 aaKnown RBP13.19□□□□□ -0.3
SPATA6-208ENST00000487543 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
SPATA6-208ENST00000487543 CCDC30Q5VVM6 783 aa13.19□□□□□ -0.3
SPATA6-208ENST00000487543 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
SPATA6-208ENST00000487543 LY75O60449 1722 aa13.19□□□□□ -0.3
SPATA6-208ENST00000487543 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
SPATA6-208ENST00000487543 GPR162Q16538 588 aa13.18□□□□□ -0.3
SPATA6-208ENST00000487543 ALDH1L2Q3SY69 923 aa13.18□□□□□ -0.3
SPATA6-208ENST00000487543 SMIM5Q71RC9 77 aa13.18□□□□□ -0.3
SPATA6-208ENST00000487543 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.18□□□□□ -0.3
SPATA6-208ENST00000487543 NLGN2Q8NFZ4 835 aa13.18□□□□□ -0.3
SPATA6-208ENST00000487543 TEX13AQ9BXU3 409 aaPredicted RBP13.18□□□□□ -0.3
SPATA6-208ENST00000487543 TJP1Q07157 1748 aa13.18□□□□□ -0.3
SPATA6-208ENST00000487543 CICQ96RK0 1608 aaPredicted RBP13.17□□□□□ -0.3
SPATA6-208ENST00000487543 LOC102724428A0A0B4J2F2 783 aa13.17□□□□□ -0.3
SPATA6-208ENST00000487543 STARD3NLO95772 234 aa13.17□□□□□ -0.3
SPATA6-208ENST00000487543 RARSP54136 660 aaKnown RBP13.17□□□□□ -0.3
SPATA6-208ENST00000487543 SIK1P57059 783 aa13.17□□□□□ -0.3
SPATA6-208ENST00000487543 AMIGO3Q86WK7 504 aa13.17□□□□□ -0.3
SPATA6-208ENST00000487543 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
SPATA6-208ENST00000487543 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
SPATA6-208ENST00000487543 BCL2L13Q9BXK5 485 aa13.17□□□□□ -0.3
SPATA6-208ENST00000487543 CACNA1FO60840 1977 aa13.17□□□□□ -0.3
SPATA6-208ENST00000487543 KIF16BQ96L93 1317 aa13.16□□□□□ -0.3
SPATA6-208ENST00000487543 HMGB2P26583 209 aaKnown RBP13.16□□□□□ -0.3
SPATA6-208ENST00000487543 ATP6V1AP38606 617 aa13.16□□□□□ -0.3
SPATA6-208ENST00000487543 AK7Q96M32 723 aa13.16□□□□□ -0.3
SPATA6-208ENST00000487543 DBF4Q9UBU7 674 aaPredicted RBP13.16□□□□□ -0.3
SPATA6-208ENST00000487543 ERBB4Q15303 1308 aa13.15□□□□□ -0.3
SPATA6-208ENST00000487543 PRAMEF22A3QJZ6 481 aa13.15□□□□□ -0.3
SPATA6-208ENST00000487543 TCERG1O14776 1098 aaKnown RBP13.15□□□□□ -0.3
SPATA6-208ENST00000487543 PHF14O94880 888 aa13.15□□□□□ -0.3
SPATA6-208ENST00000487543 DNAJC10Q8IXB1 793 aa13.15□□□□□ -0.3
SPATA6-208ENST00000487543 LINC00116Q8NCU8 138 aa13.15□□□□□ -0.3
SPATA6-208ENST00000487543 SSH1Q8WYL5 1049 aa13.15□□□□□ -0.3
SPATA6-208ENST00000487543 COL5A3P25940 1745 aaPredicted RBP13.14□□□□□ -0.31
SPATA6-208ENST00000487543 TUBGCP6Q96RT7 1819 aa13.14□□□□□ -0.31
SPATA6-208ENST00000487543 ITPK1Q13572 414 aa13.14□□□□□ -0.31
SPATA6-208ENST00000487543 NPM2Q86SE8 214 aaKnown RBP13.14□□□□□ -0.31
SPATA6-208ENST00000487543 ZNF784Q8NCA9 323 aaPredicted RBP13.14□□□□□ -0.31
SPATA6-208ENST00000487543 FLAD1Q8NFF5 587 aa13.14□□□□□ -0.31
SPATA6-208ENST00000487543 FRAT1Q92837 279 aaPredicted RBP13.14□□□□□ -0.31
SPATA6-208ENST00000487543 CHPF2Q9P2E5 772 aa13.14□□□□□ -0.31
SPATA6-208ENST00000487543 QSER1Q2KHR3 1735 aa13.13□□□□□ -0.31
SPATA6-208ENST00000487543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
SPATA6-208ENST00000487543 IPO8O15397 1037 aaKnown RBP13.13□□□□□ -0.31
SPATA6-208ENST00000487543 BCAR3O75815 825 aa13.13□□□□□ -0.31
SPATA6-208ENST00000487543 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
SPATA6-208ENST00000487543 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
SPATA6-208ENST00000487543 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
SPATA6-208ENST00000487543 NEFLP07196 543 aa13.12□□□□□ -0.31
SPATA6-208ENST00000487543 RRP1P56182 461 aaKnown RBP13.12□□□□□ -0.31
SPATA6-208ENST00000487543 DDX21Q9NR30 783 aaKnown RBP eCLIP13.12□□□□□ -0.31
SPATA6-208ENST00000487543 HYPKQ9NX55 129 aa13.12□□□□□ -0.31
SPATA6-208ENST00000487543 TAF1LQ8IZX4 1826 aa13.11□□□□□ -0.31
SPATA6-208ENST00000487543 GNPATO15228 680 aa13.11□□□□□ -0.31
SPATA6-208ENST00000487543 MYL6BP14649 208 aa13.11□□□□□ -0.31
SPATA6-208ENST00000487543 ZKSCAN2Q63HK3 967 aa13.11□□□□□ -0.31
SPATA6-208ENST00000487543 MRPL50Q8N5N7 158 aaKnown RBP13.11□□□□□ -0.31
SPATA6-208ENST00000487543 SLC4A9Q96Q91 983 aa13.11□□□□□ -0.31
SPATA6-208ENST00000487543 PTPRCP08575 1304 aa13.11□□□□□ -0.31
SPATA6-208ENST00000487543 DDX58O95786 925 aaKnown RBP13.1□□□□□ -0.31
SPATA6-208ENST00000487543 A1BGP04217 495 aa13.1□□□□□ -0.31
SPATA6-208ENST00000487543 CYP19A1P11511 503 aaPredicted RBP13.1□□□□□ -0.31
SPATA6-208ENST00000487543 MS4A1P11836 297 aa13.1□□□□□ -0.31
SPATA6-208ENST00000487543 YBX3P16989 372 aaKnown RBP eCLIP13.1□□□□□ -0.31
SPATA6-208ENST00000487543 SSFA2P28290 1259 aa13.1□□□□□ -0.31
SPATA6-208ENST00000487543 BRPF1P55201 1214 aaPredicted RBP13.1□□□□□ -0.31
SPATA6-208ENST00000487543 FKBP5Q13451 457 aaPredicted RBP13.1□□□□□ -0.31
SPATA6-208ENST00000487543 FTSJ3Q8IY81 847 aaKnown RBP13.1□□□□□ -0.31
SPATA6-208ENST00000487543 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
SPATA6-208ENST00000487543 NOB1Q9ULX3 412 aaKnown RBP13.1□□□□□ -0.31
SPATA6-208ENST00000487543 ZNF330Q9Y3S2 320 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms