RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 RAB3GAP2Q9H2M9 1393 aa13.64□□□□□ -0.23
CDK11A-217ENST00000487462 HOXC9P31274 260 aa13.64□□□□□ -0.23
CDK11A-217ENST00000487462 TMF1P82094 1093 aa13.64□□□□□ -0.23
CDK11A-217ENST00000487462 RASSF7Q02833 373 aa13.64□□□□□ -0.23
CDK11A-217ENST00000487462 PIGBQ92521 554 aa13.64□□□□□ -0.23
CDK11A-217ENST00000487462 WBP1LQ9NX94 342 aa13.64□□□□□ -0.23
CDK11A-217ENST00000487462 PCDH11XQ9BZA7 1347 aa13.64□□□□□ -0.23
CDK11A-217ENST00000487462 PCDH11YQ9BZA8 1340 aa13.64□□□□□ -0.23
CDK11A-217ENST00000487462 NBPF6Q5VWK0 638 aa13.63□□□□□ -0.23
CDK11A-217ENST00000487462 NLGN1Q8N2Q7 840 aa13.63□□□□□ -0.23
CDK11A-217ENST00000487462 USHBP1Q8N6Y0 703 aa13.63□□□□□ -0.23
CDK11A-217ENST00000487462 NBPF4Q96M43 638 aa13.63□□□□□ -0.23
CDK11A-217ENST00000487462 EDC4Q6P2E9 1401 aaKnown RBP13.63□□□□□ -0.23
CDK11A-217ENST00000487462 MAP3K19Q56UN5 1328 aa13.63□□□□□ -0.23
CDK11A-217ENST00000487462 COL5A3P25940 1745 aaPredicted RBP13.62□□□□□ -0.23
CDK11A-217ENST00000487462 CYP27B1O15528 508 aa13.62□□□□□ -0.23
CDK11A-217ENST00000487462 HSPA8P11142 646 aaKnown RBP13.62□□□□□ -0.23
CDK11A-217ENST00000487462 PDAP1Q13442 181 aaKnown RBP13.62□□□□□ -0.23
CDK11A-217ENST00000487462 CCDC85CA6NKD9 419 aa13.61□□□□□ -0.23
CDK11A-217ENST00000487462 GYS1P13807 737 aa13.61□□□□□ -0.23
CDK11A-217ENST00000487462 VEGFBP49765 207 aa13.61□□□□□ -0.23
CDK11A-217ENST00000487462 RNF25Q96BH1 459 aaPredicted RBP13.61□□□□□ -0.23
CDK11A-217ENST00000487462 RAPGEF4Q8WZA2 1011 aa13.6□□□□□ -0.23
CDK11A-217ENST00000487462 DCBLD2Q96PD2 775 aa13.6□□□□□ -0.23
CDK11A-217ENST00000487462 PARP3Q9Y6F1 533 aa13.6□□□□□ -0.23
CDK11A-217ENST00000487462 DLEC1Q9Y238 1755 aa13.6□□□□□ -0.23
CDK11A-217ENST00000487462 ZNF831Q5JPB2 1677 aa13.59□□□□□ -0.23
CDK11A-217ENST00000487462 LMNB1P20700 586 aa13.59□□□□□ -0.23
CDK11A-217ENST00000487462 FBLN1P23142 703 aa13.59□□□□□ -0.23
CDK11A-217ENST00000487462 CHRNA5P30532 468 aa13.59□□□□□ -0.23
CDK11A-217ENST00000487462 MYH14Q7Z406 1995 aaKnown RBP13.59□□□□□ -0.23
CDK11A-217ENST00000487462 DICER1Q9UPY3 1922 aaKnown RBP13.58□□□□□ -0.23
CDK11A-217ENST00000487462 POTEIP0CG38 1075 aa13.58□□□□□ -0.24
CDK11A-217ENST00000487462 POTEJP0CG39 1038 aa13.58□□□□□ -0.24
CDK11A-217ENST00000487462 TIE1P35590 1138 aa13.58□□□□□ -0.24
CDK11A-217ENST00000487462 ATP6V1AP38606 617 aa13.58□□□□□ -0.24
CDK11A-217ENST00000487462 TRAPPC3LQ5T215 181 aa13.58□□□□□ -0.24
CDK11A-217ENST00000487462 ARHGEF1Q92888 912 aaKnown RBP13.58□□□□□ -0.24
CDK11A-217ENST00000487462 ASAP1Q9ULH1 1129 aa13.58□□□□□ -0.24
CDK11A-217ENST00000487462 PASKQ96RG2 1323 aa13.58□□□□□ -0.24
CDK11A-217ENST00000487462 RTL1A6NKG5 1358 aa13.58□□□□□ -0.24
CDK11A-217ENST00000487462 KDRP35968 1356 aa13.58□□□□□ -0.24
CDK11A-217ENST00000487462 TATP17735 454 aaPredicted RBP13.57□□□□□ -0.24
CDK11A-217ENST00000487462 AMPHP49418 695 aa13.57□□□□□ -0.24
CDK11A-217ENST00000487462 PSEN1P49768 467 aa13.57□□□□□ -0.24
CDK11A-217ENST00000487462 RTCBQ9Y3I0 505 aaKnown RBP13.57□□□□□ -0.24
CDK11A-217ENST00000487462 A0A1W2PP64 1363 aa13.57□□□□□ -0.24
CDK11A-217ENST00000487462 DDR1Q08345 913 aa13.56□□□□□ -0.24
CDK11A-217ENST00000487462 THSD7BQ9C0I4 1608 aa13.56□□□□□ -0.24
CDK11A-217ENST00000487462 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
CDK11A-217ENST00000487462 SLC4A9Q96Q91 983 aa13.54□□□□□ -0.24
CDK11A-217ENST00000487462 AFDNP55196 1824 aaKnown RBP13.54□□□□□ -0.24
CDK11A-217ENST00000487462 NFKBIEO00221 500 aa13.53□□□□□ -0.24
CDK11A-217ENST00000487462 RFC4P35249 363 aa13.53□□□□□ -0.24
CDK11A-217ENST00000487462 HDGFL2Q7Z4V5 671 aaPredicted RBP13.53□□□□□ -0.24
CDK11A-217ENST00000487462 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
CDK11A-217ENST00000487462 SLC12A5Q9H2X9 1139 aa13.53□□□□□ -0.24
CDK11A-217ENST00000487462 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
CDK11A-217ENST00000487462 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
CDK11A-217ENST00000487462 ATG3Q9NT62 314 aa13.52□□□□□ -0.25
CDK11A-217ENST00000487462 TMOD3Q9NYL9 352 aa13.52□□□□□ -0.25
CDK11A-217ENST00000487462 FER1L6Q2WGJ9 1857 aa13.51□□□□□ -0.25
CDK11A-217ENST00000487462 NRXN2Q9P2S2 1712 aa13.51□□□□□ -0.25
CDK11A-217ENST00000487462 CNTNAP4Q9C0A0 1308 aa13.51□□□□□ -0.25
CDK11A-217ENST00000487462 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.51□□□□□ -0.25
CDK11A-217ENST00000487462 TMEM88BA6NKF7 163 aa13.51□□□□□ -0.25
CDK11A-217ENST00000487462 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
CDK11A-217ENST00000487462 RRS1Q15050 365 aaKnown RBP13.51□□□□□ -0.25
CDK11A-217ENST00000487462 RC3H1Q5TC82 1133 aaKnown RBP13.51□□□□□ -0.25
CDK11A-217ENST00000487462 TMC1Q8TDI8 760 aa13.51□□□□□ -0.25
CDK11A-217ENST00000487462 ZFP91Q96JP5 570 aaPredicted RBP13.51□□□□□ -0.25
CDK11A-217ENST00000487462 RASSF10A6NK89 507 aa13.5□□□□□ -0.25
CDK11A-217ENST00000487462 STK25O00506 426 aa13.5□□□□□ -0.25
CDK11A-217ENST00000487462 RPS6KA4O75676 772 aa13.5□□□□□ -0.25
CDK11A-217ENST00000487462 DPY19L2Q6NUT2 758 aa13.5□□□□□ -0.25
CDK11A-217ENST00000487462 SRP68Q9UHB9 627 aaKnown RBP13.5□□□□□ -0.25
CDK11A-217ENST00000487462 SCN4AP35499 1836 aa13.5□□□□□ -0.25
CDK11A-217ENST00000487462 ADAMTSL1Q8N6G6 1762 aa13.5□□□□□ -0.25
CDK11A-217ENST00000487462 LTBP1Q14766 1721 aa13.5□□□□□ -0.25
CDK11A-217ENST00000487462 NCAPD2Q15021 1401 aa13.49□□□□□ -0.25
CDK11A-217ENST00000487462 POLRMTO00411 1230 aaKnown RBP13.49□□□□□ -0.25
CDK11A-217ENST00000487462 ITGBL1O95965 494 aaPredicted RBP13.49□□□□□ -0.25
CDK11A-217ENST00000487462 MAP2K1Q02750 393 aaPredicted RBP13.49□□□□□ -0.25
CDK11A-217ENST00000487462 COG3Q96JB2 828 aa13.49□□□□□ -0.25
CDK11A-217ENST00000487462 USP42Q9H9J4 1324 aaKnown RBP13.48□□□□□ -0.25
CDK11A-217ENST00000487462 TTLL13PA6NNM8 815 aa13.48□□□□□ -0.25
CDK11A-217ENST00000487462 BMP2KQ9NSY1 1161 aaPredicted RBP13.48□□□□□ -0.25
CDK11A-217ENST00000487462 TERF2IPQ9NYB0 399 aa13.48□□□□□ -0.25
CDK11A-217ENST00000487462 TRPC6Q9Y210 931 aa13.48□□□□□ -0.25
CDK11A-217ENST00000487462 INSRP06213 1382 aa13.47□□□□□ -0.25
CDK11A-217ENST00000487462 WDR33Q9C0J8 1336 aaKnown RBP13.47□□□□□ -0.25
CDK11A-217ENST00000487462 HSP90AB2PQ58FF8 381 aa13.47□□□□□ -0.25
CDK11A-217ENST00000487462 LDHDQ86WU2 507 aa13.47□□□□□ -0.25
CDK11A-217ENST00000487462 CFAP44Q96MT7 982 aa13.47□□□□□ -0.25
CDK11A-217ENST00000487462 ROCK2O75116 1388 aaKnown RBP13.46□□□□□ -0.25
CDK11A-217ENST00000487462 CASP8AP2Q9UKL3 1982 aa13.46□□□□□ -0.25
CDK11A-217ENST00000487462 STK24Q9Y6E0 443 aa13.46□□□□□ -0.25
CDK11A-217ENST00000487462 TJP1Q07157 1748 aa13.45□□□□□ -0.26
CDK11A-217ENST00000487462 DDNO94850 711 aaPredicted RBP13.45□□□□□ -0.26
CDK11A-217ENST00000487462 TM4SF1P30408 202 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms