RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 NARFQ9UHQ1 456 aa28.84■■■□□ 2.21
RPL35-203ENST00000487431 ZBTB1Q9Y2K1 713 aa28.84■■■□□ 2.21
RPL35-203ENST00000487431 U2SURPO15042 1029 aaKnown RBP28.83■■■□□ 2.21
RPL35-203ENST00000487431 ZNF526Q8TF50 670 aaPredicted RBP28.83■■■□□ 2.21
RPL35-203ENST00000487431 SBF1O95248 1867 aa28.83■■■□□ 2.2
RPL35-203ENST00000487431 GNAT3A8MTJ3 354 aa28.82■■■□□ 2.2
RPL35-203ENST00000487431 FCHSD2O94868 740 aa28.82■■■□□ 2.2
RPL35-203ENST00000487431 IL17REQ8NFR9 667 aa28.82■■■□□ 2.2
RPL35-203ENST00000487431 PIM2Q9P1W9 311 aa28.82■■■□□ 2.2
RPL35-203ENST00000487431 CEMIPQ8WUJ3 1361 aa28.8■■■□□ 2.2
RPL35-203ENST00000487431 SCN7AQ01118 1682 aa28.8■■■□□ 2.2
RPL35-203ENST00000487431 CNGB1Q14028 1251 aaPredicted RBP28.79■■■□□ 2.2
RPL35-203ENST00000487431 ARHGAP27Q6ZUM4 889 aa28.79■■■□□ 2.2
RPL35-203ENST00000487431 KIF3CO14782 793 aa28.78■■■□□ 2.2
RPL35-203ENST00000487431 TTC5Q8N0Z6 440 aa28.78■■■□□ 2.2
RPL35-203ENST00000487431 BCL2L12Q9HB09 334 aa28.78■■■□□ 2.2
RPL35-203ENST00000487431 HEG1Q9ULI3 1381 aa28.77■■■□□ 2.2
RPL35-203ENST00000487431 TEFQ10587 303 aa28.77■■■□□ 2.2
RPL35-203ENST00000487431 NFIXQ14938 502 aa28.77■■■□□ 2.2
RPL35-203ENST00000487431 ZNF790Q6PG37 636 aa28.77■■■□□ 2.2
RPL35-203ENST00000487431 STARD3NLO95772 234 aa28.76■■■□□ 2.19
RPL35-203ENST00000487431 EIF5P55010 431 aaKnown RBP28.76■■■□□ 2.19
RPL35-203ENST00000487431 DALRD3Q5D0E6 543 aaKnown RBP28.76■■■□□ 2.19
RPL35-203ENST00000487431 ZNF496Q96IT1 587 aaPredicted RBP28.76■■■□□ 2.19
RPL35-203ENST00000487431 CFAP53Q96M91 514 aa28.76■■■□□ 2.19
RPL35-203ENST00000487431 RSPH6AQ9H0K4 717 aa28.76■■■□□ 2.19
RPL35-203ENST00000487431 CHRNA5P30532 468 aa28.74■■■□□ 2.19
RPL35-203ENST00000487431 PHACTR3Q96KR7 559 aa28.74■■■□□ 2.19
RPL35-203ENST00000487431 CANXP27824 592 aaKnown RBP28.73■■■□□ 2.19
RPL35-203ENST00000487431 TEX13AQ9BXU3 409 aaPredicted RBP28.73■■■□□ 2.19
RPL35-203ENST00000487431 ANKRD31Q8N7Z5 1873 aa28.72■■■□□ 2.19
RPL35-203ENST00000487431 PRKAR2BP31323 418 aa28.72■■■□□ 2.19
RPL35-203ENST00000487431 BCORQ6W2J9 1755 aa28.72■■■□□ 2.19
RPL35-203ENST00000487431 HSPA6P17066 643 aa28.71■■■□□ 2.19
RPL35-203ENST00000487431 PPP2R1AP30153 589 aa28.71■■■□□ 2.19
RPL35-203ENST00000487431 A0A087WZG4 1122 aa28.7■■■□□ 2.18
RPL35-203ENST00000487431 SERPINB2P05120 415 aa28.69■■■□□ 2.18
RPL35-203ENST00000487431 NUDCQ9Y266 331 aa28.69■■■□□ 2.18
RPL35-203ENST00000487431 C9orf131Q5VYM1 1079 aa28.68■■■□□ 2.18
RPL35-203ENST00000487431 FMNL2Q96PY5 1086 aa28.68■■■□□ 2.18
RPL35-203ENST00000487431 IL6STP40189 918 aaPredicted RBP28.67■■■□□ 2.18
RPL35-203ENST00000487431 CCDC88AQ3V6T2 1871 aa28.67■■■□□ 2.18
RPL35-203ENST00000487431 TNRC6CQ9HCJ0 1690 aaKnown RBP28.66■■■□□ 2.18
RPL35-203ENST00000487431 DLG5Q8TDM6 1919 aa28.65■■■□□ 2.18
RPL35-203ENST00000487431 CARMIL3Q8ND23 1372 aa28.64■■■□□ 2.18
RPL35-203ENST00000487431 COL11A2P13942 1736 aaPredicted RBP28.64■■■□□ 2.18
RPL35-203ENST00000487431 BTBD11A6QL63 1104 aa28.64■■■□□ 2.18
RPL35-203ENST00000487431 KCNQ3O43525 872 aa28.63■■■□□ 2.17
RPL35-203ENST00000487431 TOMM70O94826 608 aa28.63■■■□□ 2.17
RPL35-203ENST00000487431 U2AF1L5P0DN76 240 aaPredicted RBP28.63■■■□□ 2.17
RPL35-203ENST00000487431 U2AF1Q01081 240 aaKnown RBP eCLIP28.63■■■□□ 2.17
RPL35-203ENST00000487431 TBC1D9BQ66K14 1250 aa28.62■■■□□ 2.17
RPL35-203ENST00000487431 NMRK2Q9NPI5 230 aa28.62■■■□□ 2.17
RPL35-203ENST00000487431 A1BGP04217 495 aa28.61■■■□□ 2.17
RPL35-203ENST00000487431 RNF181Q9P0P0 153 aa28.61■■■□□ 2.17
RPL35-203ENST00000487431 HTATSF1O43719 755 aaKnown RBP28.59■■■□□ 2.17
RPL35-203ENST00000487431 C2CD5Q86YS7 1000 aa28.59■■■□□ 2.17
RPL35-203ENST00000487431 TBC1D2BQ9UPU7 963 aa28.59■■■□□ 2.17
RPL35-203ENST00000487431 TIAM2Q8IVF5 1701 aa28.59■■■□□ 2.17
RPL35-203ENST00000487431 ARFGEF2Q9Y6D5 1785 aa28.59■■■□□ 2.17
RPL35-203ENST00000487431 LAMB4A4D0S4 1761 aa28.58■■■□□ 2.17
RPL35-203ENST00000487431 FER1L6Q2WGJ9 1857 aa28.58■■■□□ 2.17
RPL35-203ENST00000487431 BICDL1Q6ZP65 573 aa28.58■■■□□ 2.17
RPL35-203ENST00000487431 TTLL6Q8N841 843 aa28.58■■■□□ 2.17
RPL35-203ENST00000487431 DICER1Q9UPY3 1922 aaKnown RBP28.58■■■□□ 2.17
RPL35-203ENST00000487431 ZC3H4Q9UPT8 1303 aaKnown RBP28.58■■■□□ 2.17
RPL35-203ENST00000487431 H0YIN7 160 aa28.57■■■□□ 2.16
RPL35-203ENST00000487431 CAMTA2O94983 1202 aa28.57■■■□□ 2.16
RPL35-203ENST00000487431 MCM10Q7L590 875 aa28.57■■■□□ 2.16
RPL35-203ENST00000487431 RTF1Q92541 710 aaKnown RBP28.57■■■□□ 2.16
RPL35-203ENST00000487431 PDZRN3Q9UPQ7 1066 aa28.57■■■□□ 2.16
RPL35-203ENST00000487431 KDM2BQ8NHM5 1336 aa28.56■■■□□ 2.16
RPL35-203ENST00000487431 BRIP1Q9BX63 1249 aa28.56■■■□□ 2.16
RPL35-203ENST00000487431 USP16Q9Y5T5 823 aa28.56■■■□□ 2.16
RPL35-203ENST00000487431 CACNA1SQ13698 1873 aa28.55■■■□□ 2.16
RPL35-203ENST00000487431 KDM3BQ7LBC6 1761 aa28.55■■■□□ 2.16
RPL35-203ENST00000487431 PRR5LQ6MZQ0 368 aa28.55■■■□□ 2.16
RPL35-203ENST00000487431 ZNF330Q9Y3S2 320 aaPredicted RBP28.55■■■□□ 2.16
RPL35-203ENST00000487431 SNRPA1P09661 255 aaKnown RBP28.54■■■□□ 2.16
RPL35-203ENST00000487431 RASSF7Q02833 373 aa28.54■■■□□ 2.16
RPL35-203ENST00000487431 RBM46Q8TBY0 533 aaKnown RBP28.54■■■□□ 2.16
RPL35-203ENST00000487431 WDR90Q96KV7 1748 aa28.53■■■□□ 2.16
RPL35-203ENST00000487431 PRAMEF22A3QJZ6 481 aa28.52■■■□□ 2.16
RPL35-203ENST00000487431 LMNB1P20700 586 aa28.52■■■□□ 2.16
RPL35-203ENST00000487431 PDE6BP35913 854 aa28.52■■■□□ 2.16
RPL35-203ENST00000487431 APLP1P51693 650 aa28.52■■■□□ 2.16
RPL35-203ENST00000487431 PRELPP51888 382 aa28.52■■■□□ 2.16
RPL35-203ENST00000487431 NPM2Q86SE8 214 aaKnown RBP28.52■■■□□ 2.16
RPL35-203ENST00000487431 DCTN1Q14203 1278 aa28.51■■■□□ 2.15
RPL35-203ENST00000487431 DZIP3Q86Y13 1208 aaKnown RBP28.51■■■□□ 2.15
RPL35-203ENST00000487431 SETDB2Q96T68 719 aa28.51■■■□□ 2.15
RPL35-203ENST00000487431 SLX4Q8IY92 1834 aa28.49■■■□□ 2.15
RPL35-203ENST00000487431 NFKBIEO00221 500 aa28.49■■■□□ 2.15
RPL35-203ENST00000487431 CLEC4GQ6UXB4 293 aa28.49■■■□□ 2.15
RPL35-203ENST00000487431 RGL2O15211 777 aa28.48■■■□□ 2.15
RPL35-203ENST00000487431 TAF7Q15545 349 aaPredicted RBP28.48■■■□□ 2.15
RPL35-203ENST00000487431 CNBD1Q8NA66 436 aa28.48■■■□□ 2.15
RPL35-203ENST00000487431 PIP4K2AP48426 406 aaPredicted RBP28.46■■■□□ 2.15
RPL35-203ENST00000487431 FSTL1Q12841 308 aa28.46■■■□□ 2.15
RPL35-203ENST00000487431 C16orf71Q8IYS4 520 aaPredicted RBP28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms