RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 POLRMTO00411 1230 aaKnown RBP11.54□□□□□ -0.56
HOXA9-204ENST00000487384 TNS4Q8IZW8 715 aa11.54□□□□□ -0.56
HOXA9-204ENST00000487384 TIAM2Q8IVF5 1701 aa11.53□□□□□ -0.56
HOXA9-204ENST00000487384 ZPR1O75312 459 aa11.53□□□□□ -0.56
HOXA9-204ENST00000487384 AMOTQ4VCS5 1084 aa11.53□□□□□ -0.56
HOXA9-204ENST00000487384 USPL1Q5W0Q7 1092 aa11.53□□□□□ -0.56
HOXA9-204ENST00000487384 INTS5Q6P9B9 1019 aaKnown RBP11.53□□□□□ -0.56
HOXA9-204ENST00000487384 SMC1BQ8NDV3 1235 aa11.53□□□□□ -0.56
HOXA9-204ENST00000487384 DLEC1Q9Y238 1755 aa11.52□□□□□ -0.57
HOXA9-204ENST00000487384 TM4SF1P30408 202 aa11.52□□□□□ -0.57
HOXA9-204ENST00000487384 DNAJC10Q8IXB1 793 aa11.52□□□□□ -0.57
HOXA9-204ENST00000487384 PRELPP51888 382 aa11.51□□□□□ -0.57
HOXA9-204ENST00000487384 SULT6B1Q6IMI4 303 aa11.51□□□□□ -0.57
HOXA9-204ENST00000487384 CACNA1SQ13698 1873 aa11.51□□□□□ -0.57
HOXA9-204ENST00000487384 NRXN2Q9P2S2 1712 aa11.5□□□□□ -0.57
HOXA9-204ENST00000487384 LMNB1P20700 586 aa11.5□□□□□ -0.57
HOXA9-204ENST00000487384 SLC39A6Q13433 755 aa11.5□□□□□ -0.57
HOXA9-204ENST00000487384 NFIXQ14938 502 aa11.5□□□□□ -0.57
HOXA9-204ENST00000487384 DICER1Q9UPY3 1922 aaKnown RBP11.5□□□□□ -0.57
HOXA9-204ENST00000487384 GLTPD2A6NH11 291 aa11.49□□□□□ -0.57
HOXA9-204ENST00000487384 HSPA1AP0DMV8 641 aaKnown RBP11.49□□□□□ -0.57
HOXA9-204ENST00000487384 HSPA1BP0DMV9 641 aaKnown RBP11.49□□□□□ -0.57
HOXA9-204ENST00000487384 VEGFAP15692 232 aaPredicted RBP11.49□□□□□ -0.57
HOXA9-204ENST00000487384 PANK3Q9H999 370 aa11.49□□□□□ -0.57
HOXA9-204ENST00000487384 LGR6Q9HBX8 967 aa11.49□□□□□ -0.57
HOXA9-204ENST00000487384 SOS1Q07889 1333 aaPredicted RBP11.49□□□□□ -0.57
HOXA9-204ENST00000487384 MORC1Q86VD1 984 aa11.48□□□□□ -0.57
HOXA9-204ENST00000487384 C2CD5Q86YS7 1000 aa11.48□□□□□ -0.57
HOXA9-204ENST00000487384 TTLL6Q8N841 843 aa11.48□□□□□ -0.57
HOXA9-204ENST00000487384 NARFQ9UHQ1 456 aa11.48□□□□□ -0.57
HOXA9-204ENST00000487384 ZBTB1Q9Y2K1 713 aa11.48□□□□□ -0.57
HOXA9-204ENST00000487384 COL15A1P39059 1388 aa11.48□□□□□ -0.57
HOXA9-204ENST00000487384 ANKRD31Q8N7Z5 1873 aa11.48□□□□□ -0.57
HOXA9-204ENST00000487384 CARMIL3Q8ND23 1372 aa11.47□□□□□ -0.57
HOXA9-204ENST00000487384 ZC3H4Q9UPT8 1303 aaKnown RBP11.47□□□□□ -0.57
HOXA9-204ENST00000487384 SERPINB2P05120 415 aa11.47□□□□□ -0.57
HOXA9-204ENST00000487384 CYP19A1P11511 503 aaPredicted RBP11.47□□□□□ -0.57
HOXA9-204ENST00000487384 BICDL1Q6ZP65 573 aa11.47□□□□□ -0.57
HOXA9-204ENST00000487384 SLC52A2Q9HAB3 445 aa11.47□□□□□ -0.57
HOXA9-204ENST00000487384 BCL2L12Q9HB09 334 aa11.47□□□□□ -0.57
HOXA9-204ENST00000487384 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
HOXA9-204ENST00000487384 FER1L6Q2WGJ9 1857 aa11.46□□□□□ -0.57
HOXA9-204ENST00000487384 H0YIN7 160 aa11.46□□□□□ -0.57
HOXA9-204ENST00000487384 NFKBIEO00221 500 aa11.46□□□□□ -0.57
HOXA9-204ENST00000487384 AKAP4Q5JQC9 854 aa11.46□□□□□ -0.57
HOXA9-204ENST00000487384 COL11A2P13942 1736 aaPredicted RBP11.46□□□□□ -0.58
HOXA9-204ENST00000487384 POTECB2RU33 542 aa11.45□□□□□ -0.58
HOXA9-204ENST00000487384 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
HOXA9-204ENST00000487384 IL13P35225 146 aa11.45□□□□□ -0.58
HOXA9-204ENST00000487384 CCDC24Q8N4L8 307 aa11.45□□□□□ -0.58
HOXA9-204ENST00000487384 ZNF622Q969S3 477 aaKnown RBP eCLIP11.45□□□□□ -0.58
HOXA9-204ENST00000487384 UBR2Q8IWV8 1755 aa11.44□□□□□ -0.58
HOXA9-204ENST00000487384 RNMTO43148 476 aaKnown RBP11.44□□□□□ -0.58
HOXA9-204ENST00000487384 HMOX1P09601 288 aa11.44□□□□□ -0.58
HOXA9-204ENST00000487384 SLX4Q8IY92 1834 aa11.44□□□□□ -0.58
HOXA9-204ENST00000487384 C21orf2O43822 256 aa11.43□□□□□ -0.58
HOXA9-204ENST00000487384 ERFEQ4G0M1 354 aa11.43□□□□□ -0.58
HOXA9-204ENST00000487384 DPY19L2Q6NUT2 758 aa11.43□□□□□ -0.58
HOXA9-204ENST00000487384 MKRN1Q9UHC7 482 aaKnown RBP11.43□□□□□ -0.58
HOXA9-204ENST00000487384 ZNF330Q9Y3S2 320 aaPredicted RBP11.43□□□□□ -0.58
HOXA9-204ENST00000487384 MRC1P22897 1456 aa11.43□□□□□ -0.58
HOXA9-204ENST00000487384 POTEIP0CG38 1075 aa11.42□□□□□ -0.58
HOXA9-204ENST00000487384 POTEJP0CG39 1038 aa11.42□□□□□ -0.58
HOXA9-204ENST00000487384 HSPA5P11021 654 aaKnown RBP11.42□□□□□ -0.58
HOXA9-204ENST00000487384 TBC1D9BQ66K14 1250 aa11.42□□□□□ -0.58
HOXA9-204ENST00000487384 SCN7AQ01118 1682 aa11.41□□□□□ -0.58
HOXA9-204ENST00000487384 EIF4G2P78344 907 aaKnown RBP eCLIP11.41□□□□□ -0.58
HOXA9-204ENST00000487384 MTHFSDQ2M296 383 aaKnown RBP11.41□□□□□ -0.58
HOXA9-204ENST00000487384 KNSTRNQ9Y448 316 aa11.41□□□□□ -0.58
HOXA9-204ENST00000487384 DDNO94850 711 aaPredicted RBP11.4□□□□□ -0.58
HOXA9-204ENST00000487384 STARD3NLO95772 234 aa11.4□□□□□ -0.58
HOXA9-204ENST00000487384 EIF5P55010 431 aaKnown RBP11.4□□□□□ -0.58
HOXA9-204ENST00000487384 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
HOXA9-204ENST00000487384 VSIG10Q8N0Z9 540 aa11.4□□□□□ -0.58
HOXA9-204ENST00000487384 TBC1D2BQ9UPU7 963 aa11.4□□□□□ -0.58
HOXA9-204ENST00000487384 NPHP1O15259 732 aa11.39□□□□□ -0.59
HOXA9-204ENST00000487384 PDE6BP35913 854 aa11.39□□□□□ -0.59
HOXA9-204ENST00000487384 PRR5LQ6MZQ0 368 aa11.39□□□□□ -0.59
HOXA9-204ENST00000487384 TTC5Q8N0Z6 440 aa11.39□□□□□ -0.59
HOXA9-204ENST00000487384 BRIP1Q9BX63 1249 aa11.39□□□□□ -0.59
HOXA9-204ENST00000487384 CREBZFQ9NS37 354 aa11.39□□□□□ -0.59
HOXA9-204ENST00000487384 ARFGEF2Q9Y6D5 1785 aa11.39□□□□□ -0.59
HOXA9-204ENST00000487384 A0A087WZG4 1122 aa11.38□□□□□ -0.59
HOXA9-204ENST00000487384 FOXN1O15353 648 aa11.38□□□□□ -0.59
HOXA9-204ENST00000487384 ZNF496Q96IT1 587 aaPredicted RBP11.38□□□□□ -0.59
HOXA9-204ENST00000487384 TAOK3Q9H2K8 898 aa11.38□□□□□ -0.59
HOXA9-204ENST00000487384 TIMELESSQ9UNS1 1208 aa11.38□□□□□ -0.59
HOXA9-204ENST00000487384 SIPA1L3O60292 1781 aaPredicted RBP11.38□□□□□ -0.59
HOXA9-204ENST00000487384 SCN4AP35499 1836 aa11.37□□□□□ -0.59
HOXA9-204ENST00000487384 TRIM26Q12899 539 aaPredicted RBP11.37□□□□□ -0.59
HOXA9-204ENST00000487384 PCGF6Q9BYE7 350 aa11.37□□□□□ -0.59
HOXA9-204ENST00000487384 BCORQ6W2J9 1755 aa11.36□□□□□ -0.59
HOXA9-204ENST00000487384 A1BGP04217 495 aa11.36□□□□□ -0.59
HOXA9-204ENST00000487384 TEFQ10587 303 aa11.36□□□□□ -0.59
HOXA9-204ENST00000487384 AMER1Q5JTC6 1135 aaPredicted RBP11.36□□□□□ -0.59
HOXA9-204ENST00000487384 PRPF40BQ6NWY9 871 aaKnown RBP11.36□□□□□ -0.59
HOXA9-204ENST00000487384 CNBD1Q8NA66 436 aa11.36□□□□□ -0.59
HOXA9-204ENST00000487384 SETDB2Q96T68 719 aa11.36□□□□□ -0.59
HOXA9-204ENST00000487384 PDZRN3Q9UPQ7 1066 aa11.36□□□□□ -0.59
HOXA9-204ENST00000487384 HEG1Q9ULI3 1381 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms