RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 FBXO41Q8TF61 875 aa10.16□□□□□ -0.78
ZNF541-204ENST00000487275 PHAXQ9H814 394 aaKnown RBP10.16□□□□□ -0.78
ZNF541-204ENST00000487275 DDX21Q9NR30 783 aaKnown RBP eCLIP10.16□□□□□ -0.78
ZNF541-204ENST00000487275 ATG3Q9NT62 314 aa10.16□□□□□ -0.78
ZNF541-204ENST00000487275 ASAP1Q9ULH1 1129 aa10.16□□□□□ -0.78
ZNF541-204ENST00000487275 USP16Q9Y5T5 823 aa10.16□□□□□ -0.78
ZNF541-204ENST00000487275 GLI3P10071 1580 aa10.16□□□□□ -0.78
ZNF541-204ENST00000487275 KCPQ6ZWJ8 1503 aa10.16□□□□□ -0.78
ZNF541-204ENST00000487275 RGS12O14924 1447 aa10.16□□□□□ -0.78
ZNF541-204ENST00000487275 ERBB4Q15303 1308 aa10.15□□□□□ -0.78
ZNF541-204ENST00000487275 F6X3S4 739 aa10.15□□□□□ -0.78
ZNF541-204ENST00000487275 DDX58O95786 925 aaKnown RBP10.15□□□□□ -0.78
ZNF541-204ENST00000487275 CCT4P50991 539 aaKnown RBP10.15□□□□□ -0.78
ZNF541-204ENST00000487275 ZNF772Q68DY9 489 aaPredicted RBP10.15□□□□□ -0.78
ZNF541-204ENST00000487275 VSIG10Q8N0Z9 540 aa10.15□□□□□ -0.78
ZNF541-204ENST00000487275 RBM42Q9BTD8 480 aaKnown RBP10.15□□□□□ -0.78
ZNF541-204ENST00000487275 THSD7AQ9UPZ6 1657 aa10.15□□□□□ -0.79
ZNF541-204ENST00000487275 CACNA1FO60840 1977 aa10.14□□□□□ -0.79
ZNF541-204ENST00000487275 DOT1LQ8TEK3 1739 aa10.14□□□□□ -0.79
ZNF541-204ENST00000487275 ONECUT3O60422 494 aaPredicted RBP10.14□□□□□ -0.79
ZNF541-204ENST00000487275 PROSER3Q2NL68 480 aa10.14□□□□□ -0.79
ZNF541-204ENST00000487275 SEPT12Q8IYM1 358 aa10.14□□□□□ -0.79
ZNF541-204ENST00000487275 TEX13AQ9BXU3 409 aaPredicted RBP10.14□□□□□ -0.79
ZNF541-204ENST00000487275 C5P01031 1676 aa10.14□□□□□ -0.79
ZNF541-204ENST00000487275 UBR2Q8IWV8 1755 aa10.14□□□□□ -0.79
ZNF541-204ENST00000487275 ITGB4P16144 1822 aa10.13□□□□□ -0.79
ZNF541-204ENST00000487275 ZBTB7BO15156 539 aaPredicted RBP10.13□□□□□ -0.79
ZNF541-204ENST00000487275 MYL6BP14649 208 aa10.13□□□□□ -0.79
ZNF541-204ENST00000487275 AIMP1Q12904 312 aaKnown RBP10.13□□□□□ -0.79
ZNF541-204ENST00000487275 PDIA6Q15084 440 aa10.13□□□□□ -0.79
ZNF541-204ENST00000487275 CENPQQ7L2Z9 268 aaPredicted RBP10.13□□□□□ -0.79
ZNF541-204ENST00000487275 DNAAF4Q8WXU2 420 aa10.13□□□□□ -0.79
ZNF541-204ENST00000487275 SMARCC1Q92922 1105 aaPredicted RBP10.13□□□□□ -0.79
ZNF541-204ENST00000487275 ZBTB40Q9NUA8 1239 aa10.13□□□□□ -0.79
ZNF541-204ENST00000487275 PXDNLA1KZ92 1463 aa10.12□□□□□ -0.79
ZNF541-204ENST00000487275 LAMB4A4D0S4 1761 aa10.12□□□□□ -0.79
ZNF541-204ENST00000487275 PI4KAP2A4QPH2 592 aa10.12□□□□□ -0.79
ZNF541-204ENST00000487275 STARD3NLO95772 234 aa10.12□□□□□ -0.79
ZNF541-204ENST00000487275 KSR2Q6VAB6 950 aa10.12□□□□□ -0.79
ZNF541-204ENST00000487275 DNAJC10Q8IXB1 793 aa10.12□□□□□ -0.79
ZNF541-204ENST00000487275 PI4KAP1Q8N8J0 262 aa10.12□□□□□ -0.79
ZNF541-204ENST00000487275 XAGE3Q8WTP9 111 aa10.12□□□□□ -0.79
ZNF541-204ENST00000487275 RWDD1Q9H446 243 aaPredicted RBP10.12□□□□□ -0.79
ZNF541-204ENST00000487275 PCDHB15Q9Y5E8 787 aa10.12□□□□□ -0.79
ZNF541-204ENST00000487275 KCNQ2O43526 872 aa10.11□□□□□ -0.79
ZNF541-204ENST00000487275 A1BGP04217 495 aa10.11□□□□□ -0.79
ZNF541-204ENST00000487275 PIP4K2AP48426 406 aaPredicted RBP10.11□□□□□ -0.79
ZNF541-204ENST00000487275 RBM6P78332 1123 aaKnown RBP10.11□□□□□ -0.79
ZNF541-204ENST00000487275 COPS6Q7L5N1 327 aa10.11□□□□□ -0.79
ZNF541-204ENST00000487275 RIC3Q7Z5B4 369 aa10.11□□□□□ -0.79
ZNF541-204ENST00000487275 SRCIN1Q9C0H9 1055 aa10.11□□□□□ -0.79
ZNF541-204ENST00000487275 MAP3K2Q9Y2U5 619 aa10.11□□□□□ -0.79
ZNF541-204ENST00000487275 KAT6BQ8WYB5 2073 aa10.11□□□□□ -0.79
ZNF541-204ENST00000487275 KDM2BQ8NHM5 1336 aa10.1□□□□□ -0.79
ZNF541-204ENST00000487275 GNAI3P08754 354 aa10.1□□□□□ -0.79
ZNF541-204ENST00000487275 MEIS3Q99687 375 aa10.1□□□□□ -0.79
ZNF541-204ENST00000487275 C1orf115Q9H7X2 142 aa10.1□□□□□ -0.79
ZNF541-204ENST00000487275 ADCY9O60503 1353 aa10.1□□□□□ -0.79
ZNF541-204ENST00000487275 PALLDQ8WX93 1383 aa10.1□□□□□ -0.79
ZNF541-204ENST00000487275 ATP10DQ9P241 1426 aa10.09□□□□□ -0.79
ZNF541-204ENST00000487275 LOC102724428A0A0B4J2F2 783 aa10.09□□□□□ -0.79
ZNF541-204ENST00000487275 NBPF26B4DH59 902 aa10.09□□□□□ -0.79
ZNF541-204ENST00000487275 IGHDP01880 384 aa10.09□□□□□ -0.79
ZNF541-204ENST00000487275 ATP6V1AP38606 617 aa10.09□□□□□ -0.79
ZNF541-204ENST00000487275 SIK1P57059 783 aa10.09□□□□□ -0.79
ZNF541-204ENST00000487275 NEXNQ0ZGT2 675 aa10.09□□□□□ -0.79
ZNF541-204ENST00000487275 HDAC1Q13547 482 aaPredicted RBP10.09□□□□□ -0.79
ZNF541-204ENST00000487275 FAM182BQ5T319 152 aa10.09□□□□□ -0.79
ZNF541-204ENST00000487275 BEND3Q5T5X7 828 aa10.09□□□□□ -0.79
ZNF541-204ENST00000487275 NBPF14Q5TI25 921 aa10.09□□□□□ -0.79
ZNF541-204ENST00000487275 NBPF10Q6P3W6 841 aaKnown RBP10.09□□□□□ -0.79
ZNF541-204ENST00000487275 ANKRD13DQ6ZTN6 518 aa10.09□□□□□ -0.79
ZNF541-204ENST00000487275 LRP10Q7Z4F1 713 aa10.09□□□□□ -0.79
ZNF541-204ENST00000487275 NBPF15Q8N660 670 aa10.09□□□□□ -0.79
ZNF541-204ENST00000487275 ALDH1L1O75891 902 aa10.08□□□□□ -0.8
ZNF541-204ENST00000487275 GNAI2P04899 355 aa10.08□□□□□ -0.8
ZNF541-204ENST00000487275 CYP19A1P11511 503 aaPredicted RBP10.08□□□□□ -0.8
ZNF541-204ENST00000487275 KRT27Q7Z3Y8 459 aa10.08□□□□□ -0.8
ZNF541-204ENST00000487275 NPM2Q86SE8 214 aaKnown RBP10.08□□□□□ -0.8
ZNF541-204ENST00000487275 PLBD2Q8NHP8 589 aa10.08□□□□□ -0.8
ZNF541-204ENST00000487275 SLC4A9Q96Q91 983 aa10.08□□□□□ -0.8
ZNF541-204ENST00000487275 ZNF330Q9Y3S2 320 aaPredicted RBP10.08□□□□□ -0.8
ZNF541-204ENST00000487275 UBTFL1P0CB47 393 aaPredicted RBP10.07□□□□□ -0.8
ZNF541-204ENST00000487275 RXRBP28702 533 aa10.07□□□□□ -0.8
ZNF541-204ENST00000487275 KIF6Q6ZMV9 814 aa10.07□□□□□ -0.8
ZNF541-204ENST00000487275 LINS1Q8NG48 757 aa10.07□□□□□ -0.8
ZNF541-204ENST00000487275 MYD88Q99836 296 aa10.07□□□□□ -0.8
ZNF541-204ENST00000487275 METTL22Q9BUU2 404 aaPredicted RBP10.07□□□□□ -0.8
ZNF541-204ENST00000487275 NHSQ6T4R5 1651 aa10.06□□□□□ -0.8
ZNF541-204ENST00000487275 FAM196AQ6ZSG2 479 aa10.06□□□□□ -0.8
ZNF541-204ENST00000487275 TTLL7Q6ZT98 887 aa10.06□□□□□ -0.8
ZNF541-204ENST00000487275 RPAP2Q8IXW5 612 aaPredicted RBP10.06□□□□□ -0.8
ZNF541-204ENST00000487275 ANKRD44Q8N8A2 993 aa10.06□□□□□ -0.8
ZNF541-204ENST00000487275 ARXQ96QS3 562 aa10.06□□□□□ -0.8
ZNF541-204ENST00000487275 USP44Q9H0E7 712 aa10.06□□□□□ -0.8
ZNF541-204ENST00000487275 C9orf78Q9NZ63 289 aaPredicted RBP10.06□□□□□ -0.8
ZNF541-204ENST00000487275 HDAC5Q9UQL6 1122 aa10.06□□□□□ -0.8
ZNF541-204ENST00000487275 ZBTB1Q9Y2K1 713 aa10.06□□□□□ -0.8
ZNF541-204ENST00000487275 N4BP2Q86UW6 1770 aaPredicted RBP10.06□□□□□ -0.8
ZNF541-204ENST00000487275 HMMRO75330 724 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms