RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 PLEKHG2Q9H7P9 1386 aa9.66□□□□□ -0.86
UBE4B-209ENST00000487244 ZNF827Q17R98 1081 aa9.66□□□□□ -0.86
UBE4B-209ENST00000487244 ZNF530Q6P9A1 599 aaPredicted RBP9.66□□□□□ -0.86
UBE4B-209ENST00000487244 MPRIPQ6WCQ1 1025 aa9.66□□□□□ -0.86
UBE4B-209ENST00000487244 IFNL2Q8IZJ0 200 aa9.66□□□□□ -0.86
UBE4B-209ENST00000487244 SLAIN1Q8ND83 568 aa9.66□□□□□ -0.86
UBE4B-209ENST00000487244 PIGBQ92521 554 aa9.66□□□□□ -0.86
UBE4B-209ENST00000487244 QSER1Q2KHR3 1735 aa9.65□□□□□ -0.86
UBE4B-209ENST00000487244 PALLDQ8WX93 1383 aa9.65□□□□□ -0.86
UBE4B-209ENST00000487244 U2SURPO15042 1029 aaKnown RBP9.65□□□□□ -0.86
UBE4B-209ENST00000487244 PLEKHO1Q53GL0 409 aaPredicted RBP9.65□□□□□ -0.86
UBE4B-209ENST00000487244 NBPF14Q5TI25 921 aa9.65□□□□□ -0.86
UBE4B-209ENST00000487244 RYDENQ9NUL5 291 aaKnown RBP9.65□□□□□ -0.86
UBE4B-209ENST00000487244 ADAMTS7Q9UKP4 1686 aa9.64□□□□□ -0.87
UBE4B-209ENST00000487244 ZEB1P37275 1124 aaPredicted RBP9.64□□□□□ -0.87
UBE4B-209ENST00000487244 C4BP0C0L5 1744 aa9.63□□□□□ -0.87
UBE4B-209ENST00000487244 SLC15A2Q16348 729 aa9.63□□□□□ -0.87
UBE4B-209ENST00000487244 AMOTQ4VCS5 1084 aa9.63□□□□□ -0.87
UBE4B-209ENST00000487244 MICALL2Q8IY33 904 aa9.63□□□□□ -0.87
UBE4B-209ENST00000487244 TMEM121BQ9BXQ6 578 aaPredicted RBP9.63□□□□□ -0.87
UBE4B-209ENST00000487244 STK32BQ9NY57 414 aa9.63□□□□□ -0.87
UBE4B-209ENST00000487244 CCNL1Q9UK58 526 aaPredicted RBP9.63□□□□□ -0.87
UBE4B-209ENST00000487244 ASAP1Q9ULH1 1129 aa9.63□□□□□ -0.87
UBE4B-209ENST00000487244 UBR3Q6ZT12 1888 aa9.62□□□□□ -0.87
UBE4B-209ENST00000487244 MRC1P22897 1456 aa9.62□□□□□ -0.87
UBE4B-209ENST00000487244 MTHFSDQ2M296 383 aaKnown RBP9.62□□□□□ -0.87
UBE4B-209ENST00000487244 C1orf141Q5JVX7 400 aa9.62□□□□□ -0.87
UBE4B-209ENST00000487244 SLC27A3Q5K4L6 730 aa9.62□□□□□ -0.87
UBE4B-209ENST00000487244 DCAF5Q96JK2 942 aa9.62□□□□□ -0.87
UBE4B-209ENST00000487244 CFAP53Q96M91 514 aa9.62□□□□□ -0.87
UBE4B-209ENST00000487244 TMOD3Q9NYL9 352 aa9.62□□□□□ -0.87
UBE4B-209ENST00000487244 SIPA1L3O60292 1781 aaPredicted RBP9.62□□□□□ -0.87
UBE4B-209ENST00000487244 DLG5Q8TDM6 1919 aa9.62□□□□□ -0.87
UBE4B-209ENST00000487244 COL5A3P25940 1745 aaPredicted RBP9.62□□□□□ -0.87
UBE4B-209ENST00000487244 PHACTR3Q96KR7 559 aa9.61□□□□□ -0.87
UBE4B-209ENST00000487244 RSPH6AQ9H0K4 717 aa9.61□□□□□ -0.87
UBE4B-209ENST00000487244 ATG3Q9NT62 314 aa9.61□□□□□ -0.87
UBE4B-209ENST00000487244 TJP1Q07157 1748 aa9.61□□□□□ -0.87
UBE4B-209ENST00000487244 ZNF831Q5JPB2 1677 aa9.61□□□□□ -0.87
UBE4B-209ENST00000487244 ERVV-2B6SEH9 535 aa9.6□□□□□ -0.87
UBE4B-209ENST00000487244 ZBTB7AO95365 584 aa9.6□□□□□ -0.87
UBE4B-209ENST00000487244 HSP90AB1P08238 724 aaKnown RBP9.6□□□□□ -0.87
UBE4B-209ENST00000487244 U2AF1L5P0DN76 240 aaPredicted RBP9.6□□□□□ -0.87
UBE4B-209ENST00000487244 PRKAR2BP31323 418 aa9.6□□□□□ -0.87
UBE4B-209ENST00000487244 U2AF1Q01081 240 aaKnown RBP eCLIP9.6□□□□□ -0.87
UBE4B-209ENST00000487244 AKAP4Q5JQC9 854 aa9.6□□□□□ -0.87
UBE4B-209ENST00000487244 AMIGO3Q86WK7 504 aa9.6□□□□□ -0.87
UBE4B-209ENST00000487244 LGR6Q9HBX8 967 aa9.6□□□□□ -0.87
UBE4B-209ENST00000487244 MYH14Q7Z406 1995 aaKnown RBP9.6□□□□□ -0.87
UBE4B-209ENST00000487244 COL24A1Q17RW2 1714 aa9.59□□□□□ -0.87
UBE4B-209ENST00000487244 PNPLA7Q6ZV29 1317 aa9.59□□□□□ -0.87
UBE4B-209ENST00000487244 LOC102724428A0A0B4J2F2 783 aa9.59□□□□□ -0.87
UBE4B-209ENST00000487244 SIK1P57059 783 aa9.59□□□□□ -0.87
UBE4B-209ENST00000487244 CABP4P57796 275 aa9.59□□□□□ -0.87
UBE4B-209ENST00000487244 ITPK1Q13572 414 aa9.59□□□□□ -0.87
UBE4B-209ENST00000487244 SMIM5Q71RC9 77 aa9.59□□□□□ -0.87
UBE4B-209ENST00000487244 NFATC2IPQ8NCF5 419 aa9.59□□□□□ -0.87
UBE4B-209ENST00000487244 LINC00116Q8NCU8 138 aa9.59□□□□□ -0.87
UBE4B-209ENST00000487244 SMARCC1Q92922 1105 aaPredicted RBP9.59□□□□□ -0.87
UBE4B-209ENST00000487244 SLC4A9Q96Q91 983 aa9.59□□□□□ -0.87
UBE4B-209ENST00000487244 UBR2Q8IWV8 1755 aa9.59□□□□□ -0.87
UBE4B-209ENST00000487244 MAP3K5Q99683 1374 aa9.59□□□□□ -0.87
UBE4B-209ENST00000487244 CICQ96RK0 1608 aaPredicted RBP9.58□□□□□ -0.88
UBE4B-209ENST00000487244 RNMTO43148 476 aaKnown RBP9.58□□□□□ -0.88
UBE4B-209ENST00000487244 PPP1R37O75864 691 aa9.58□□□□□ -0.88
UBE4B-209ENST00000487244 BBXQ8WY36 941 aaPredicted RBP9.58□□□□□ -0.88
UBE4B-209ENST00000487244 TFCP2L1Q9NZI6 479 aa9.58□□□□□ -0.88
UBE4B-209ENST00000487244 NUDCQ9Y266 331 aa9.58□□□□□ -0.88
UBE4B-209ENST00000487244 KCPQ6ZWJ8 1503 aa9.57□□□□□ -0.88
UBE4B-209ENST00000487244 PTGER2P43116 358 aa9.57□□□□□ -0.88
UBE4B-209ENST00000487244 RALBP1Q15311 655 aa9.57□□□□□ -0.88
UBE4B-209ENST00000487244 SLC52A2Q9HAB3 445 aa9.57□□□□□ -0.88
UBE4B-209ENST00000487244 SPON1Q9HCB6 807 aa9.57□□□□□ -0.88
UBE4B-209ENST00000487244 MYBBP1AQ9BQG0 1328 aaKnown RBP9.56□□□□□ -0.88
UBE4B-209ENST00000487244 C4AP0C0L4 1744 aa9.56□□□□□ -0.88
UBE4B-209ENST00000487244 PTCD1O75127 700 aaKnown RBP9.56□□□□□ -0.88
UBE4B-209ENST00000487244 ATP6V1AP38606 617 aa9.56□□□□□ -0.88
UBE4B-209ENST00000487244 SLC39A6Q13433 755 aa9.56□□□□□ -0.88
UBE4B-209ENST00000487244 COL23A1Q86Y22 540 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-209ENST00000487244 IL17REQ8NFR9 667 aa9.56□□□□□ -0.88
UBE4B-209ENST00000487244 GAS2L2Q8NHY3 880 aa9.56□□□□□ -0.88
UBE4B-209ENST00000487244 ZNF316A6NFI3 1004 aaPredicted RBP9.55□□□□□ -0.88
UBE4B-209ENST00000487244 GNAT3A8MTJ3 354 aa9.55□□□□□ -0.88
UBE4B-209ENST00000487244 FCHSD2O94868 740 aa9.55□□□□□ -0.88
UBE4B-209ENST00000487244 MTFR1LQ9H019 292 aa9.55□□□□□ -0.88
UBE4B-209ENST00000487244 PRKRIP1Q9H875 184 aaPredicted RBP9.55□□□□□ -0.88
UBE4B-209ENST00000487244 CEMIPQ8WUJ3 1361 aa9.54□□□□□ -0.88
UBE4B-209ENST00000487244 SNPHO15079 494 aa9.54□□□□□ -0.88
UBE4B-209ENST00000487244 GTPBP6O43824 516 aaPredicted RBP9.54□□□□□ -0.88
UBE4B-209ENST00000487244 PHF14O94880 888 aa9.54□□□□□ -0.88
UBE4B-209ENST00000487244 MSL1Q68DK7 614 aa9.54□□□□□ -0.88
UBE4B-209ENST00000487244 MCM10Q7L590 875 aa9.54□□□□□ -0.88
UBE4B-209ENST00000487244 AK7Q96M32 723 aa9.54□□□□□ -0.88
UBE4B-209ENST00000487244 PLEKHF1Q96S99 279 aa9.54□□□□□ -0.88
UBE4B-209ENST00000487244 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.54□□□□□ -0.88
UBE4B-209ENST00000487244 GNPATO15228 680 aa9.53□□□□□ -0.88
UBE4B-209ENST00000487244 DCTN1Q14203 1278 aa9.53□□□□□ -0.88
UBE4B-209ENST00000487244 FAM163AQ96GL9 167 aaPredicted RBP9.53□□□□□ -0.88
UBE4B-209ENST00000487244 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.52□□□□□ -0.89
UBE4B-209ENST00000487244 PPP1R1BQ9UD71 204 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms