RNA–Protein interactions for RNA: ENST00000487232.1

CASP7-209, Transcript of caspase 7, humanhuman

TSL 2

Gene CASP7, Length 799 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-209ENST00000487232 SEPT12Q8IYM1 358 aa8.84□□□□□ -0.99
CASP7-209ENST00000487232 TMC2Q8TDI7 906 aa8.84□□□□□ -0.99
CASP7-209ENST00000487232 ZNF526Q8TF50 670 aaPredicted RBP8.84□□□□□ -0.99
CASP7-209ENST00000487232 GIPC2Q8TF65 315 aa8.84□□□□□ -0.99
CASP7-209ENST00000487232 NUDT16Q96DE0 195 aaKnown RBP8.84□□□□□ -0.99
CASP7-209ENST00000487232 NWD2Q9ULI1 1742 aa8.84□□□□□ -0.99
CASP7-209ENST00000487232 LHX6Q9UPM6 363 aa8.84□□□□□ -0.99
CASP7-209ENST00000487232 AXIN2Q9Y2T1 843 aa8.84□□□□□ -0.99
CASP7-209ENST00000487232 PCDHGA4Q9Y5G9 962 aa8.84□□□□□ -0.99
CASP7-209ENST00000487232 PRR36Q9H6K5 1346 aa8.83□□□□□ -1
CASP7-209ENST00000487232 FAM83GA6ND36 823 aa8.83□□□□□ -1
CASP7-209ENST00000487232 ATG7O95352 703 aa8.83□□□□□ -1
CASP7-209ENST00000487232 MDM2Q00987 491 aaPredicted RBP8.83□□□□□ -1
CASP7-209ENST00000487232 NAALADL2Q58DX5 795 aa8.83□□□□□ -1
CASP7-209ENST00000487232 TBC1D2BQ9UPU7 963 aa8.83□□□□□ -1
CASP7-209ENST00000487232 ITSN1Q15811 1721 aa8.83□□□□□ -1
CASP7-209ENST00000487232 GLI3P10071 1580 aa8.82□□□□□ -1
CASP7-209ENST00000487232 BLMP54132 1417 aaPredicted RBP8.82□□□□□ -1
CASP7-209ENST00000487232 OSBPP22059 807 aa8.82□□□□□ -1
CASP7-209ENST00000487232 PTGER2P43116 358 aa8.82□□□□□ -1
CASP7-209ENST00000487232 CDK19Q9BWU1 502 aa8.82□□□□□ -1
CASP7-209ENST00000487232 PRDM11Q9NQV5 511 aa8.82□□□□□ -1
CASP7-209ENST00000487232 GPHNQ9NQX3 736 aaPredicted RBP8.82□□□□□ -1
CASP7-209ENST00000487232 BTG4Q9NY30 223 aa8.82□□□□□ -1
CASP7-209ENST00000487232 ARHGEF28Q8N1W1 1705 aaKnown RBP8.82□□□□□ -1
CASP7-209ENST00000487232 ABCA3Q99758 1704 aa8.82□□□□□ -1
CASP7-209ENST00000487232 KIAA1210Q9ULL0 1709 aa8.82□□□□□ -1
CASP7-209ENST00000487232 PLCH1Q4KWH8 1693 aa8.81□□□□□ -1
CASP7-209ENST00000487232 TRPM3Q9HCF6 1732 aaPredicted RBP8.81□□□□□ -1
CASP7-209ENST00000487232 POTEEQ6S8J3 1075 aa8.81□□□□□ -1
CASP7-209ENST00000487232 KRT27Q7Z3Y8 459 aa8.81□□□□□ -1
CASP7-209ENST00000487232 ADAMTS19Q8TE59 1207 aa8.81□□□□□ -1
CASP7-209ENST00000487232 COL14A1Q05707 1796 aaKnown RBP8.81□□□□□ -1
CASP7-209ENST00000487232 VAMP1P23763 118 aa8.8□□□□□ -1
CASP7-209ENST00000487232 LMOD1P29536 600 aaPredicted RBP8.8□□□□□ -1
CASP7-209ENST00000487232 FAM98CQ17RN3 349 aaKnown RBP8.8□□□□□ -1
CASP7-209ENST00000487232 PPP2R2DQ66LE6 453 aa8.8□□□□□ -1
CASP7-209ENST00000487232 ATP7BP35670 1465 aa8.8□□□□□ -1
CASP7-209ENST00000487232 ALS2Q96Q42 1657 aa8.8□□□□□ -1
CASP7-209ENST00000487232 ACEP12821 1306 aa8.8□□□□□ -1
CASP7-209ENST00000487232 CENPJQ9HC77 1338 aaPredicted RBP8.8□□□□□ -1
CASP7-209ENST00000487232 PALM3A6NDB9 673 aaPredicted RBP8.79□□□□□ -1
CASP7-209ENST00000487232 NBPF1Q3BBV0 1214 aa8.79□□□□□ -1
CASP7-209ENST00000487232 NBPF8Q3BBV2 869 aa8.79□□□□□ -1
CASP7-209ENST00000487232 GIMAP6Q6P9H5 292 aa8.79□□□□□ -1
CASP7-209ENST00000487232 TMED8Q6PL24 325 aaPredicted RBP8.79□□□□□ -1
CASP7-209ENST00000487232 POLR3AO14802 1390 aaPredicted RBP8.78□□□□□ -1
CASP7-209ENST00000487232 BRD4O60885 1362 aaPredicted RBP8.78□□□□□ -1
CASP7-209ENST00000487232 SLC34A2O95436 690 aa8.78□□□□□ -1
CASP7-209ENST00000487232 BAG6P46379 1132 aa8.78□□□□□ -1
CASP7-209ENST00000487232 EVA1CP58658 441 aa8.78□□□□□ -1
CASP7-209ENST00000487232 PTGDRQ13258 359 aa8.78□□□□□ -1
CASP7-209ENST00000487232 NLRP13Q86W25 1043 aa8.78□□□□□ -1
CASP7-209ENST00000487232 ABTB2Q8N961 1025 aa8.78□□□□□ -1
CASP7-209ENST00000487232 SPATA31A5Q5VU36 1347 aa8.78□□□□□ -1
CASP7-209ENST00000487232 SPATA31A7Q8IWB4 1347 aa8.78□□□□□ -1
CASP7-209ENST00000487232 KIAA0232Q92628 1395 aa8.77□□□□□ -1.01
CASP7-209ENST00000487232 LOC102724159A0A0B4J2E5 919 aa8.77□□□□□ -1.01
CASP7-209ENST00000487232 PBX2P40425 430 aa8.77□□□□□ -1.01
CASP7-209ENST00000487232 PWP2Q15269 919 aaKnown RBP8.77□□□□□ -1.01
CASP7-209ENST00000487232 WASHC4Q2M389 1173 aa8.77□□□□□ -1.01
CASP7-209ENST00000487232 NUTM2GQ5VZR2 741 aa8.77□□□□□ -1.01
CASP7-209ENST00000487232 RIPOR2Q9Y4F9 1068 aa8.77□□□□□ -1.01
CASP7-209ENST00000487232 BRWD3Q6RI45 1802 aa8.77□□□□□ -1.01
CASP7-209ENST00000487232 CHRNA2Q15822 529 aa8.76□□□□□ -1.01
CASP7-209ENST00000487232 CDCA8Q53HL2 280 aa8.76□□□□□ -1.01
CASP7-209ENST00000487232 L3MBTL2Q969R5 705 aa8.76□□□□□ -1.01
CASP7-209ENST00000487232 PRDM16Q9HAZ2 1276 aa8.76□□□□□ -1.01
CASP7-209ENST00000487232 STRN4Q9NRL3 753 aa8.76□□□□□ -1.01
CASP7-209ENST00000487232 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
CASP7-209ENST00000487232 PPIP5K1Q6PFW1 1433 aa8.76□□□□□ -1.01
CASP7-209ENST00000487232 NRAPQ86VF7 1730 aa8.76□□□□□ -1.01
CASP7-209ENST00000487232 EVC2Q86UK5 1308 aa8.76□□□□□ -1.01
CASP7-209ENST00000487232 TOPAZ1Q8N9V7 1692 aa8.75□□□□□ -1.01
CASP7-209ENST00000487232 NEUROD1Q13562 356 aa8.75□□□□□ -1.01
CASP7-209ENST00000487232 DIXDC1Q155Q3 683 aa8.75□□□□□ -1.01
CASP7-209ENST00000487232 NOM1Q5C9Z4 860 aaKnown RBP8.75□□□□□ -1.01
CASP7-209ENST00000487232 DPH6Q7L8W6 267 aa8.75□□□□□ -1.01
CASP7-209ENST00000487232 DEFB132Q7Z7B7 95 aa8.75□□□□□ -1.01
CASP7-209ENST00000487232 MICAL1Q8TDZ2 1067 aa8.75□□□□□ -1.01
CASP7-209ENST00000487232 TBC1D2Q9BYX2 928 aa8.75□□□□□ -1.01
CASP7-209ENST00000487232 SPATA31A1Q5TZJ5 1347 aa8.75□□□□□ -1.01
CASP7-209ENST00000487232 CRYBG1Q9Y4K1 1723 aa8.74□□□□□ -1.01
CASP7-209ENST00000487232 MARSP56192 900 aaKnown RBP8.74□□□□□ -1.01
CASP7-209ENST00000487232 PDE3BQ13370 1112 aa8.74□□□□□ -1.01
CASP7-209ENST00000487232 ZNF662Q6ZS27 426 aa8.74□□□□□ -1.01
CASP7-209ENST00000487232 MYH16Q9H6N6 1097 aa8.74□□□□□ -1.01
CASP7-209ENST00000487232 PPME1Q9Y570 386 aa8.74□□□□□ -1.01
CASP7-209ENST00000487232 USP19O94966 1318 aa8.74□□□□□ -1.01
CASP7-209ENST00000487232 ROCK2O75116 1388 aaKnown RBP8.73□□□□□ -1.01
CASP7-209ENST00000487232 CPDO75976 1380 aa8.73□□□□□ -1.01
CASP7-209ENST00000487232 PHRF1Q9P1Y6 1649 aaKnown RBP8.73□□□□□ -1.01
CASP7-209ENST00000487232 QRICH2Q9H0J4 1663 aa8.73□□□□□ -1.01
CASP7-209ENST00000487232 GCP02774 474 aa8.73□□□□□ -1.01
CASP7-209ENST00000487232 NEFLP07196 543 aa8.73□□□□□ -1.01
CASP7-209ENST00000487232 FAM196AQ6ZSG2 479 aa8.73□□□□□ -1.01
CASP7-209ENST00000487232 NOP9Q86U38 636 aaKnown RBP8.73□□□□□ -1.01
CASP7-209ENST00000487232 SIN3AQ96ST3 1273 aa8.73□□□□□ -1.01
CASP7-209ENST00000487232 CABP1Q9NZU7 370 aa8.73□□□□□ -1.01
CASP7-209ENST00000487232 TFIP11Q9UBB9 837 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms