RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 PPP1R26Q5T8A7 1209 aaPredicted RBP9.59□□□□□ -0.87
RTFDC1-209ENST00000487211 MAGI3Q5TCQ9 1506 aa9.59□□□□□ -0.87
RTFDC1-209ENST00000487211 DKK1O94907 266 aa9.58□□□□□ -0.88
RTFDC1-209ENST00000487211 NR3C2P08235 984 aa9.58□□□□□ -0.88
RTFDC1-209ENST00000487211 SEC13P55735 322 aa9.58□□□□□ -0.88
RTFDC1-209ENST00000487211 ZNF784Q8NCA9 323 aaPredicted RBP9.58□□□□□ -0.88
RTFDC1-209ENST00000487211 PKD2L1Q9P0L9 805 aa9.58□□□□□ -0.88
RTFDC1-209ENST00000487211 V9GY48 417 aaPredicted RBP9.58□□□□□ -0.88
RTFDC1-209ENST00000487211 CCDC18Q5T9S5 1454 aa9.58□□□□□ -0.88
RTFDC1-209ENST00000487211 SFI1A8K8P3 1242 aa9.57□□□□□ -0.88
RTFDC1-209ENST00000487211 MYT1Q01538 1121 aa9.57□□□□□ -0.88
RTFDC1-209ENST00000487211 KCNA1Q09470 495 aa9.57□□□□□ -0.88
RTFDC1-209ENST00000487211 WASF2Q9Y6W5 498 aa9.57□□□□□ -0.88
RTFDC1-209ENST00000487211 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.56□□□□□ -0.88
RTFDC1-209ENST00000487211 B4GALNT3Q6L9W6 998 aa9.56□□□□□ -0.88
RTFDC1-209ENST00000487211 SNIP1Q8TAD8 396 aaKnown RBP9.56□□□□□ -0.88
RTFDC1-209ENST00000487211 OSBPL3Q9H4L5 887 aa9.56□□□□□ -0.88
RTFDC1-209ENST00000487211 MTUS2Q5JR59 1369 aa9.55□□□□□ -0.88
RTFDC1-209ENST00000487211 PATL2C9JE40 543 aaKnown RBP9.55□□□□□ -0.88
RTFDC1-209ENST00000487211 NNTQ13423 1086 aa9.55□□□□□ -0.88
RTFDC1-209ENST00000487211 SWI5Q1ZZU3 235 aa9.55□□□□□ -0.88
RTFDC1-209ENST00000487211 CLP1Q92989 425 aaKnown RBP9.55□□□□□ -0.88
RTFDC1-209ENST00000487211 PGPEP1Q9NXJ5 209 aa9.55□□□□□ -0.88
RTFDC1-209ENST00000487211 PTPRTO14522 1441 aa9.55□□□□□ -0.88
RTFDC1-209ENST00000487211 PLCH2O75038 1416 aa9.55□□□□□ -0.88
RTFDC1-209ENST00000487211 ABCA9Q8IUA7 1624 aa9.54□□□□□ -0.88
RTFDC1-209ENST00000487211 TTC24A2A3L6 582 aaPredicted RBP9.54□□□□□ -0.88
RTFDC1-209ENST00000487211 LILRA1O75019 489 aa9.54□□□□□ -0.88
RTFDC1-209ENST00000487211 SLAIN2Q9P270 581 aa9.54□□□□□ -0.88
RTFDC1-209ENST00000487211 EMILIN1Q9Y6C2 1016 aa9.54□□□□□ -0.88
RTFDC1-209ENST00000487211 CYP4X1Q8N118 509 aa9.53□□□□□ -0.88
RTFDC1-209ENST00000487211 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
RTFDC1-209ENST00000487211 HINFPQ9BQA5 517 aa9.53□□□□□ -0.88
RTFDC1-209ENST00000487211 YEATS2Q9ULM3 1422 aa9.53□□□□□ -0.88
RTFDC1-209ENST00000487211 KIF14Q15058 1648 aa9.53□□□□□ -0.88
RTFDC1-209ENST00000487211 TNFRSF10AO00220 468 aa9.52□□□□□ -0.89
RTFDC1-209ENST00000487211 LGR5O75473 907 aa9.52□□□□□ -0.89
RTFDC1-209ENST00000487211 RAPGEF3O95398 923 aa9.52□□□□□ -0.89
RTFDC1-209ENST00000487211 ATP2B4P23634 1241 aa9.52□□□□□ -0.89
RTFDC1-209ENST00000487211 SSFA2P28290 1259 aa9.52□□□□□ -0.89
RTFDC1-209ENST00000487211 ADD1P35611 737 aaKnown RBP9.52□□□□□ -0.89
RTFDC1-209ENST00000487211 EFCAB2Q5VUJ9 269 aa9.52□□□□□ -0.89
RTFDC1-209ENST00000487211 CYP2U1Q7Z449 544 aa9.52□□□□□ -0.89
RTFDC1-209ENST00000487211 CFAP43Q8NDM7 1665 aa9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 TTC37Q6PGP7 1564 aa9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 J3QL48 77 aa9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 GDF9O60383 454 aa9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 PRMT3O60678 531 aa9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 STAU1O95793 577 aaKnown RBP9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 GDF10P55107 478 aa9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 PPARGC1BQ86YN6 1023 aaKnown RBP9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 TSEN2Q8NCE0 465 aaKnown RBP9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 GZF1Q9H116 711 aaPredicted RBP9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 ZNF358Q9NW07 568 aa9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 IVNS1ABPQ9Y6Y0 642 aa9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 LRRC9Q6ZRR7 1453 aa9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 TEX14Q8IWB6 1497 aa9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 MAP3K1Q13233 1512 aa9.51□□□□□ -0.89
RTFDC1-209ENST00000487211 TIAM1Q13009 1591 aa9.5□□□□□ -0.89
RTFDC1-209ENST00000487211 AKNAQ7Z591 1439 aa9.5□□□□□ -0.89
RTFDC1-209ENST00000487211 TMEM229AB2RXF0 380 aa9.5□□□□□ -0.89
RTFDC1-209ENST00000487211 UBAP1LF5GYI3 381 aa9.5□□□□□ -0.89
RTFDC1-209ENST00000487211 SCNN1DP51172 638 aa9.5□□□□□ -0.89
RTFDC1-209ENST00000487211 PRIMPOLQ96LW4 560 aa9.5□□□□□ -0.89
RTFDC1-209ENST00000487211 CFDP1Q9UEE9 299 aaPredicted RBP9.5□□□□□ -0.89
RTFDC1-209ENST00000487211 GPATCH8Q9UKJ3 1502 aaKnown RBP9.5□□□□□ -0.89
RTFDC1-209ENST00000487211 ZNF644Q9H582 1327 aaPredicted RBP9.5□□□□□ -0.89
RTFDC1-209ENST00000487211 PHLDB1Q86UU1 1377 aa9.5□□□□□ -0.89
RTFDC1-209ENST00000487211 FANCAO15360 1455 aa9.49□□□□□ -0.89
RTFDC1-209ENST00000487211 M0R2N6 131 aa9.49□□□□□ -0.89
RTFDC1-209ENST00000487211 PHLDB3Q6NSJ2 640 aa9.49□□□□□ -0.89
RTFDC1-209ENST00000487211 SERTAD1Q9UHV2 236 aa9.49□□□□□ -0.89
RTFDC1-209ENST00000487211 CCNB3Q8WWL7 1395 aa9.49□□□□□ -0.89
RTFDC1-209ENST00000487211 NEO1Q92859 1461 aa9.48□□□□□ -0.89
RTFDC1-209ENST00000487211 BACH1O14867 736 aa9.48□□□□□ -0.89
RTFDC1-209ENST00000487211 GNRH1P01148 92 aa9.48□□□□□ -0.89
RTFDC1-209ENST00000487211 WDR4P57081 412 aaKnown RBP9.48□□□□□ -0.89
RTFDC1-209ENST00000487211 POTEAQ6S8J7 498 aa9.48□□□□□ -0.89
RTFDC1-209ENST00000487211 AFAP1Q8N556 730 aa9.48□□□□□ -0.89
RTFDC1-209ENST00000487211 ITPKCQ96DU7 683 aa9.48□□□□□ -0.89
RTFDC1-209ENST00000487211 ETNK1Q9HBU6 452 aa9.48□□□□□ -0.89
RTFDC1-209ENST00000487211 RAB6BQ9NRW1 208 aa9.48□□□□□ -0.89
RTFDC1-209ENST00000487211 SCAPERQ9BY12 1400 aa9.48□□□□□ -0.89
RTFDC1-209ENST00000487211 NCOA2Q15596 1464 aa9.47□□□□□ -0.89
RTFDC1-209ENST00000487211 ARAP3Q8WWN8 1544 aa9.47□□□□□ -0.89
RTFDC1-209ENST00000487211 ZIC2O95409 532 aaPredicted RBP9.47□□□□□ -0.89
RTFDC1-209ENST00000487211 INHAP05111 366 aa9.47□□□□□ -0.89
RTFDC1-209ENST00000487211 HNRNPMP52272 730 aaKnown RBP eCLIP9.47□□□□□ -0.89
RTFDC1-209ENST00000487211 CBLBQ13191 982 aa9.47□□□□□ -0.89
RTFDC1-209ENST00000487211 ESCO1Q5FWF5 840 aa9.47□□□□□ -0.89
RTFDC1-209ENST00000487211 TOR4AQ9NXH8 423 aa9.47□□□□□ -0.89
RTFDC1-209ENST00000487211 EHBP1L1Q8N3D4 1523 aa9.46□□□□□ -0.89
RTFDC1-209ENST00000487211 WASLO00401 505 aaPredicted RBP9.46□□□□□ -0.9
RTFDC1-209ENST00000487211 ADH1AP07327 375 aa9.46□□□□□ -0.9
RTFDC1-209ENST00000487211 ARID4AP29374 1257 aaPredicted RBP9.46□□□□□ -0.9
RTFDC1-209ENST00000487211 CCER1Q8TC90 406 aaPredicted RBP9.46□□□□□ -0.9
RTFDC1-209ENST00000487211 ARHGEF10LQ9HCE6 1279 aa9.46□□□□□ -0.9
RTFDC1-209ENST00000487211 CXXC1Q9P0U4 656 aaPredicted RBP9.46□□□□□ -0.9
RTFDC1-209ENST00000487211 SMPD1P17405 629 aa9.45□□□□□ -0.9
RTFDC1-209ENST00000487211 OCLNQ16625 522 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms