RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 C16orf46Q6P387 395 aa8.52□□□□□ -1.05
PRPF38A-203ENST00000487160 NBPF15Q8N660 670 aa8.52□□□□□ -1.05
PRPF38A-203ENST00000487160 ZDHHC1Q8WTX9 485 aa8.52□□□□□ -1.05
PRPF38A-203ENST00000487160 EML1O00423 815 aa8.51□□□□□ -1.05
PRPF38A-203ENST00000487160 CAPN5O15484 640 aaPredicted RBP8.51□□□□□ -1.05
PRPF38A-203ENST00000487160 COX20Q5RI15 118 aa8.51□□□□□ -1.05
PRPF38A-203ENST00000487160 DNAJC14Q6Y2X3 702 aaPredicted RBP8.51□□□□□ -1.05
PRPF38A-203ENST00000487160 ZNF295-AS1Q8N0V1 137 aa8.51□□□□□ -1.05
PRPF38A-203ENST00000487160 NGLY1Q96IV0 654 aa8.51□□□□□ -1.05
PRPF38A-203ENST00000487160 TSEN34Q9BSV6 310 aaKnown RBP8.51□□□□□ -1.05
PRPF38A-203ENST00000487160 ZNF232Q9UNY5 417 aa8.51□□□□□ -1.05
PRPF38A-203ENST00000487160 HCN4Q9Y3Q4 1203 aa8.51□□□□□ -1.05
PRPF38A-203ENST00000487160 PARP3Q9Y6F1 533 aa8.51□□□□□ -1.05
PRPF38A-203ENST00000487160 ARHGAP4P98171 946 aa8.5□□□□□ -1.05
PRPF38A-203ENST00000487160 NOM1Q5C9Z4 860 aaKnown RBP8.5□□□□□ -1.05
PRPF38A-203ENST00000487160 TMEM214Q6NUQ4 689 aaKnown RBP8.5□□□□□ -1.05
PRPF38A-203ENST00000487160 POTEAQ6S8J7 498 aa8.5□□□□□ -1.05
PRPF38A-203ENST00000487160 L3MBTL2Q969R5 705 aa8.5□□□□□ -1.05
PRPF38A-203ENST00000487160 ZNF428Q96B54 188 aa8.5□□□□□ -1.05
PRPF38A-203ENST00000487160 INSM2Q96T92 566 aaPredicted RBP8.5□□□□□ -1.05
PRPF38A-203ENST00000487160 GRIP2Q9C0E4 1043 aa8.5□□□□□ -1.05
PRPF38A-203ENST00000487160 QTRT2Q9H974 415 aaKnown RBP8.5□□□□□ -1.05
PRPF38A-203ENST00000487160 SLC27A3Q5K4L6 730 aa8.49□□□□□ -1.05
PRPF38A-203ENST00000487160 NIFKQ9BYG3 293 aaKnown RBP8.49□□□□□ -1.05
PRPF38A-203ENST00000487160 LRFN2Q9ULH4 789 aa8.49□□□□□ -1.05
PRPF38A-203ENST00000487160 PDZRN3Q9UPQ7 1066 aa8.49□□□□□ -1.05
PRPF38A-203ENST00000487160 SPINT1O43278 529 aa8.48□□□□□ -1.05
PRPF38A-203ENST00000487160 FAM13AO94988 1023 aa8.48□□□□□ -1.05
PRPF38A-203ENST00000487160 NPR3P17342 541 aa8.48□□□□□ -1.05
PRPF38A-203ENST00000487160 MPSTP25325 297 aa8.48□□□□□ -1.05
PRPF38A-203ENST00000487160 GTF2E1P29083 439 aaPredicted RBP8.48□□□□□ -1.05
PRPF38A-203ENST00000487160 GPC1P35052 558 aa8.48□□□□□ -1.05
PRPF38A-203ENST00000487160 RNF144AP50876 292 aaPredicted RBP8.48□□□□□ -1.05
PRPF38A-203ENST00000487160 ALDH16A1Q8IZ83 802 aa8.48□□□□□ -1.05
PRPF38A-203ENST00000487160 LINC00528Q8N1L1 170 aa8.48□□□□□ -1.05
PRPF38A-203ENST00000487160 RHBDD1Q8TEB9 315 aa8.48□□□□□ -1.05
PRPF38A-203ENST00000487160 POLMQ9NP87 494 aaPredicted RBP8.48□□□□□ -1.05
PRPF38A-203ENST00000487160 TNFRSF10BO14763 440 aa8.47□□□□□ -1.05
PRPF38A-203ENST00000487160 CTSOP43234 321 aaPredicted RBP8.47□□□□□ -1.05
PRPF38A-203ENST00000487160 RANGAP1P46060 587 aaPredicted RBP8.47□□□□□ -1.05
PRPF38A-203ENST00000487160 RBM25P49756 843 aaKnown RBP8.47□□□□□ -1.05
PRPF38A-203ENST00000487160 HIRAP54198 1017 aaPredicted RBP8.47□□□□□ -1.05
PRPF38A-203ENST00000487160 MYO19Q96H55 970 aa8.47□□□□□ -1.05
PRPF38A-203ENST00000487160 STIM2Q9P246 746 aa8.47□□□□□ -1.05
PRPF38A-203ENST00000487160 AMOTL2Q9Y2J4 779 aa8.47□□□□□ -1.05
PRPF38A-203ENST00000487160 UPP2O95045 317 aa8.46□□□□□ -1.06
PRPF38A-203ENST00000487160 ERCC3P19447 782 aa8.46□□□□□ -1.06
PRPF38A-203ENST00000487160 MAPK1P28482 360 aa8.46□□□□□ -1.06
PRPF38A-203ENST00000487160 GNASQ5JWF2 1037 aa8.46□□□□□ -1.06
PRPF38A-203ENST00000487160 PHACTR1Q9C0D0 580 aa8.46□□□□□ -1.06
PRPF38A-203ENST00000487160 DCTN4Q9UJW0 460 aa8.46□□□□□ -1.06
PRPF38A-203ENST00000487160 ANKRD33BA6NCL7 494 aa8.45□□□□□ -1.06
PRPF38A-203ENST00000487160 FAM187AA6NFU0 413 aa8.45□□□□□ -1.06
PRPF38A-203ENST00000487160 RGS20O76081 388 aa8.45□□□□□ -1.06
PRPF38A-203ENST00000487160 BMP2P12643 396 aa8.45□□□□□ -1.06
PRPF38A-203ENST00000487160 C4orf17Q53FE4 359 aa8.45□□□□□ -1.06
PRPF38A-203ENST00000487160 C6orf118Q5T5N4 469 aa8.45□□□□□ -1.06
PRPF38A-203ENST00000487160 TXLNAP40222 546 aa8.44□□□□□ -1.06
PRPF38A-203ENST00000487160 PHKA2P46019 1235 aa8.44□□□□□ -1.06
PRPF38A-203ENST00000487160 PLA2G4AP47712 749 aa8.44□□□□□ -1.06
PRPF38A-203ENST00000487160 EIF1AXP47813 144 aaKnown RBP8.44□□□□□ -1.06
PRPF38A-203ENST00000487160 RTN1Q16799 776 aa8.44□□□□□ -1.06
PRPF38A-203ENST00000487160 FAM26DQ5JW98 314 aa8.44□□□□□ -1.06
PRPF38A-203ENST00000487160 KLK14Q9P0G3 267 aa8.44□□□□□ -1.06
PRPF38A-203ENST00000487160 ZBTB39O15060 712 aa8.43□□□□□ -1.06
PRPF38A-203ENST00000487160 BRD2P25440 801 aaKnown RBP8.43□□□□□ -1.06
PRPF38A-203ENST00000487160 DGKZQ13574 1117 aa8.43□□□□□ -1.06
PRPF38A-203ENST00000487160 AAMPQ13685 434 aa8.43□□□□□ -1.06
PRPF38A-203ENST00000487160 C11orf91Q3C1V1 193 aa8.43□□□□□ -1.06
PRPF38A-203ENST00000487160 MRPL14Q6P1L8 145 aaKnown RBP8.43□□□□□ -1.06
PRPF38A-203ENST00000487160 PRICKLE2Q7Z3G6 844 aa8.43□□□□□ -1.06
PRPF38A-203ENST00000487160 AIDAQ96BJ3 306 aa8.43□□□□□ -1.06
PRPF38A-203ENST00000487160 SPATA31C2B4DYI2 1134 aa8.42□□□□□ -1.06
PRPF38A-203ENST00000487160 AVPP01185 164 aa8.42□□□□□ -1.06
PRPF38A-203ENST00000487160 POU4F2Q12837 409 aa8.42□□□□□ -1.06
PRPF38A-203ENST00000487160 C1orf53Q5VUE5 145 aa8.42□□□□□ -1.06
PRPF38A-203ENST00000487160 ALKBH2Q6NS38 261 aa8.42□□□□□ -1.06
PRPF38A-203ENST00000487160 ASB16Q96NS5 453 aa8.42□□□□□ -1.06
PRPF38A-203ENST00000487160 FZD6O60353 706 aa8.41□□□□□ -1.06
PRPF38A-203ENST00000487160 NPAS4Q8IUM7 802 aa8.41□□□□□ -1.06
PRPF38A-203ENST00000487160 ZSCAN29Q8IWY8 852 aaPredicted RBP8.41□□□□□ -1.06
PRPF38A-203ENST00000487160 ETFBKMTQ8IXQ9 262 aa8.41□□□□□ -1.06
PRPF38A-203ENST00000487160 ABTB2Q8N961 1025 aa8.41□□□□□ -1.06
PRPF38A-203ENST00000487160 RNF217Q8TC41 542 aa8.41□□□□□ -1.06
PRPF38A-203ENST00000487160 IFT43Q96FT9 208 aa8.41□□□□□ -1.06
PRPF38A-203ENST00000487160 CCDC87Q9NVE4 849 aa8.41□□□□□ -1.06
PRPF38A-203ENST00000487160 BRPF3Q9ULD4 1205 aa8.41□□□□□ -1.06
PRPF38A-203ENST00000487160 RBM47A0AV96 593 aaKnown RBP8.4□□□□□ -1.06
PRPF38A-203ENST00000487160 BMP1P13497 986 aa8.4□□□□□ -1.06
PRPF38A-203ENST00000487160 NBPF10Q6P3W6 841 aaKnown RBP8.4□□□□□ -1.06
PRPF38A-203ENST00000487160 ATCAYQ86WG3 371 aa8.4□□□□□ -1.06
PRPF38A-203ENST00000487160 FIGNL2A6NMB9 653 aa8.39□□□□□ -1.07
PRPF38A-203ENST00000487160 NDUFB5O43674 189 aa8.39□□□□□ -1.07
PRPF38A-203ENST00000487160 SCARF1Q14162 830 aa8.39□□□□□ -1.07
PRPF38A-203ENST00000487160 NBPF1Q3BBV0 1214 aa8.39□□□□□ -1.07
PRPF38A-203ENST00000487160 LYSMD3Q7Z3D4 306 aa8.39□□□□□ -1.07
PRPF38A-203ENST00000487160 TRIM46Q7Z4K8 759 aa8.39□□□□□ -1.07
PRPF38A-203ENST00000487160 C7orf43Q8WVR3 580 aa8.39□□□□□ -1.07
PRPF38A-203ENST00000487160 BCL2L13Q9BXK5 485 aa8.39□□□□□ -1.07
PRPF38A-203ENST00000487160 RBCK1Q9BYM8 510 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms