RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 SPOCK3Q9BQ16 436 aa8.39□□□□□ -1.07
SNRNP40-205ENST00000486941 GGA1Q9UJY5 639 aa8.39□□□□□ -1.07
SNRNP40-205ENST00000486941 PHF24Q9UPV7 400 aa8.39□□□□□ -1.07
SNRNP40-205ENST00000486941 PARP3Q9Y6F1 533 aa8.39□□□□□ -1.07
SNRNP40-205ENST00000486941 POM121CA8CG34 1229 aa8.38□□□□□ -1.07
SNRNP40-205ENST00000486941 CDK2AP1O14519 115 aa8.38□□□□□ -1.07
SNRNP40-205ENST00000486941 BMP4P12644 408 aa8.38□□□□□ -1.07
SNRNP40-205ENST00000486941 GTF2E1P29083 439 aaPredicted RBP8.38□□□□□ -1.07
SNRNP40-205ENST00000486941 SOX11P35716 441 aa8.38□□□□□ -1.07
SNRNP40-205ENST00000486941 FOXK2Q01167 660 aa8.38□□□□□ -1.07
SNRNP40-205ENST00000486941 TNP2Q05952 138 aa8.38□□□□□ -1.07
SNRNP40-205ENST00000486941 TBC1D9Q6ZT07 1266 aa8.38□□□□□ -1.07
SNRNP40-205ENST00000486941 AIDAQ96BJ3 306 aa8.38□□□□□ -1.07
SNRNP40-205ENST00000486941 NIFKQ9BYG3 293 aaKnown RBP8.38□□□□□ -1.07
SNRNP40-205ENST00000486941 SUV39H2Q9H5I1 410 aa8.38□□□□□ -1.07
SNRNP40-205ENST00000486941 PCDHGC4Q9Y5F7 938 aa8.38□□□□□ -1.07
SNRNP40-205ENST00000486941 A0A1W2PNR3 127 aa8.37□□□□□ -1.07
SNRNP40-205ENST00000486941 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.37□□□□□ -1.07
SNRNP40-205ENST00000486941 C7orf43Q8WVR3 580 aa8.37□□□□□ -1.07
SNRNP40-205ENST00000486941 ZIC5Q96T25 663 aa8.37□□□□□ -1.07
SNRNP40-205ENST00000486941 MAPTP10636 758 aaKnown RBP8.36□□□□□ -1.07
SNRNP40-205ENST00000486941 SKIP12755 728 aa8.36□□□□□ -1.07
SNRNP40-205ENST00000486941 TXLNAP40222 546 aa8.36□□□□□ -1.07
SNRNP40-205ENST00000486941 EPHA4P54764 986 aa8.36□□□□□ -1.07
SNRNP40-205ENST00000486941 DEPDC4Q8N2C3 294 aa8.36□□□□□ -1.07
SNRNP40-205ENST00000486941 BTBD6Q96KE9 485 aa8.36□□□□□ -1.07
SNRNP40-205ENST00000486941 STRN4Q9NRL3 753 aa8.36□□□□□ -1.07
SNRNP40-205ENST00000486941 ZNF358Q9NW07 568 aa8.36□□□□□ -1.07
SNRNP40-205ENST00000486941 GDF2Q9UK05 429 aaPredicted RBP8.36□□□□□ -1.07
SNRNP40-205ENST00000486941 DCDC2BA2VCK2 349 aa8.35□□□□□ -1.07
SNRNP40-205ENST00000486941 ZBTB7BO15156 539 aaPredicted RBP8.35□□□□□ -1.07
SNRNP40-205ENST00000486941 EPXP11678 715 aa8.35□□□□□ -1.07
SNRNP40-205ENST00000486941 CD33P20138 364 aa8.35□□□□□ -1.07
SNRNP40-205ENST00000486941 NCOA4Q13772 614 aa8.35□□□□□ -1.07
SNRNP40-205ENST00000486941 GRIN2CQ14957 1233 aa8.35□□□□□ -1.07
SNRNP40-205ENST00000486941 SLCO4C1Q6ZQN7 724 aa8.35□□□□□ -1.07
SNRNP40-205ENST00000486941 NLRP8Q86W28 1048 aa8.35□□□□□ -1.07
SNRNP40-205ENST00000486941 GOLGA6L1Q8N7Z2 621 aa8.35□□□□□ -1.07
SNRNP40-205ENST00000486941 KIAA1024Q9UPX6 916 aa8.35□□□□□ -1.07
SNRNP40-205ENST00000486941 NEURL1BA8MQ27 555 aa8.34□□□□□ -1.07
SNRNP40-205ENST00000486941 MSTNO14793 375 aa8.34□□□□□ -1.07
SNRNP40-205ENST00000486941 ATXN7O15265 892 aaPredicted RBP8.34□□□□□ -1.07
SNRNP40-205ENST00000486941 GTF2IP78347 998 aa8.34□□□□□ -1.07
SNRNP40-205ENST00000486941 SH3PXD2AQ5TCZ1 1133 aa8.34□□□□□ -1.07
SNRNP40-205ENST00000486941 PODNQ7Z5L7 613 aa8.34□□□□□ -1.07
SNRNP40-205ENST00000486941 C1orf216Q8TAB5 229 aa8.34□□□□□ -1.07
SNRNP40-205ENST00000486941 SCHIP1Q9P0W5 487 aaPredicted RBP8.34□□□□□ -1.07
SNRNP40-205ENST00000486941 TBCELQ5QJ74 424 aa8.33□□□□□ -1.08
SNRNP40-205ENST00000486941 FCHSD1Q86WN1 690 aa8.33□□□□□ -1.08
SNRNP40-205ENST00000486941 UCN2Q96RP3 112 aa8.33□□□□□ -1.08
SNRNP40-205ENST00000486941 CABP1Q9NZU7 370 aa8.33□□□□□ -1.08
SNRNP40-205ENST00000486941 ARAFP10398 606 aa8.32□□□□□ -1.08
SNRNP40-205ENST00000486941 EML3Q32P44 896 aa8.32□□□□□ -1.08
SNRNP40-205ENST00000486941 ARSJQ5FYB0 599 aaPredicted RBP8.32□□□□□ -1.08
SNRNP40-205ENST00000486941 FIGNL1Q6PIW4 674 aa8.32□□□□□ -1.08
SNRNP40-205ENST00000486941 TNS4Q8IZW8 715 aa8.32□□□□□ -1.08
SNRNP40-205ENST00000486941 RRAGCQ9HB90 399 aa8.32□□□□□ -1.08
SNRNP40-205ENST00000486941 ZDHHC3Q9NYG2 299 aa8.32□□□□□ -1.08
SNRNP40-205ENST00000486941 USP17L5A8MUK1 530 aa8.31□□□□□ -1.08
SNRNP40-205ENST00000486941 DGKGP49619 791 aa8.31□□□□□ -1.08
SNRNP40-205ENST00000486941 NFATC2IPQ8NCF5 419 aa8.31□□□□□ -1.08
SNRNP40-205ENST00000486941 MKL2Q9ULH7 1088 aa8.31□□□□□ -1.08
SNRNP40-205ENST00000486941 NOD1Q9Y239 953 aa8.31□□□□□ -1.08
SNRNP40-205ENST00000486941 KHNYNO15037 678 aaKnown RBP8.3□□□□□ -1.08
SNRNP40-205ENST00000486941 EFSO43281 561 aa8.3□□□□□ -1.08
SNRNP40-205ENST00000486941 CLDN10P78369 228 aa8.3□□□□□ -1.08
SNRNP40-205ENST00000486941 FAM182BQ5T319 152 aa8.3□□□□□ -1.08
SNRNP40-205ENST00000486941 L3MBTL2Q969R5 705 aa8.3□□□□□ -1.08
SNRNP40-205ENST00000486941 ADAM23O75077 832 aa8.29□□□□□ -1.08
SNRNP40-205ENST00000486941 DKK1O94907 266 aa8.29□□□□□ -1.08
SNRNP40-205ENST00000486941 FAM157BP0CG42 384 aa8.29□□□□□ -1.08
SNRNP40-205ENST00000486941 PCBP4P57723 403 aaKnown RBP8.29□□□□□ -1.08
SNRNP40-205ENST00000486941 TEAD4Q15561 434 aa8.29□□□□□ -1.08
SNRNP40-205ENST00000486941 MDFIQ99750 246 aa8.29□□□□□ -1.08
SNRNP40-205ENST00000486941 EML1O00423 815 aa8.28□□□□□ -1.08
SNRNP40-205ENST00000486941 NOS2P35228 1153 aa8.28□□□□□ -1.08
SNRNP40-205ENST00000486941 NBPF1Q3BBV0 1214 aa8.28□□□□□ -1.08
SNRNP40-205ENST00000486941 SLC9A9Q8IVB4 645 aa8.28□□□□□ -1.08
SNRNP40-205ENST00000486941 UNC13AQ9UPW8 1703 aa8.28□□□□□ -1.08
SNRNP40-205ENST00000486941 LZTS3O60299 673 aaPredicted RBP8.27□□□□□ -1.09
SNRNP40-205ENST00000486941 AMPD1P23109 780 aa8.27□□□□□ -1.09
SNRNP40-205ENST00000486941 SAMD5Q5TGI4 173 aa8.27□□□□□ -1.09
SNRNP40-205ENST00000486941 HDGFL1Q5TGJ6 251 aa8.27□□□□□ -1.09
SNRNP40-205ENST00000486941 CHSY3Q70JA7 882 aa8.27□□□□□ -1.09
SNRNP40-205ENST00000486941 MYO15BQ96JP2 1530 aa8.27□□□□□ -1.09
SNRNP40-205ENST00000486941 BACH1O14867 736 aa8.26□□□□□ -1.09
SNRNP40-205ENST00000486941 TATP17735 454 aaPredicted RBP8.26□□□□□ -1.09
SNRNP40-205ENST00000486941 LRRC69Q6ZNQ3 347 aa8.26□□□□□ -1.09
SNRNP40-205ENST00000486941 BAG6P46379 1132 aa8.25□□□□□ -1.09
SNRNP40-205ENST00000486941 PSME1Q06323 249 aa8.25□□□□□ -1.09
SNRNP40-205ENST00000486941 SFSWAPQ12872 951 aaKnown RBP8.25□□□□□ -1.09
SNRNP40-205ENST00000486941 ZNF468Q5VIY5 522 aaPredicted RBP8.25□□□□□ -1.09
SNRNP40-205ENST00000486941 POTEAQ6S8J7 498 aa8.25□□□□□ -1.09
SNRNP40-205ENST00000486941 CD163Q86VB7 1156 aa8.25□□□□□ -1.09
SNRNP40-205ENST00000486941 PLEKHM2Q8IWE5 1019 aa8.25□□□□□ -1.09
SNRNP40-205ENST00000486941 TRIM11Q96F44 468 aa8.25□□□□□ -1.09
SNRNP40-205ENST00000486941 USP17L3A6NCW0 530 aa8.24□□□□□ -1.09
SNRNP40-205ENST00000486941 USP17L4A6NCW7 530 aa8.24□□□□□ -1.09
SNRNP40-205ENST00000486941 C1QTNF9BB2RNN3 333 aa8.24□□□□□ -1.09
SNRNP40-205ENST00000486941 ADH6P28332 368 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms