RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 USP44Q9H0E7 712 aa14.54□□□□□ -0.08
PRKCB-207ENST00000486868 SPATA31A1Q5TZJ5 1347 aa14.54□□□□□ -0.08
PRKCB-207ENST00000486868 LRP6O75581 1613 aa14.54□□□□□ -0.08
PRKCB-207ENST00000486868 N4BP2Q86UW6 1770 aaPredicted RBP14.54□□□□□ -0.08
PRKCB-207ENST00000486868 VIRMAQ69YN4 1812 aaKnown RBP14.54□□□□□ -0.08
PRKCB-207ENST00000486868 ADCY9O60503 1353 aa14.53□□□□□ -0.08
PRKCB-207ENST00000486868 ATP8B2P98198 1209 aa14.53□□□□□ -0.08
PRKCB-207ENST00000486868 LRP10Q7Z4F1 713 aa14.53□□□□□ -0.08
PRKCB-207ENST00000486868 DDX54Q8TDD1 881 aaKnown RBP14.53□□□□□ -0.08
PRKCB-207ENST00000486868 C1orf115Q9H7X2 142 aa14.53□□□□□ -0.08
PRKCB-207ENST00000486868 SPATA31A5Q5VU36 1347 aa14.52□□□□□ -0.08
PRKCB-207ENST00000486868 SPATA31A6Q5VVP1 1343 aa14.52□□□□□ -0.08
PRKCB-207ENST00000486868 SPATA31A7Q8IWB4 1347 aa14.52□□□□□ -0.08
PRKCB-207ENST00000486868 PIP4K2BP78356 416 aa14.52□□□□□ -0.09
PRKCB-207ENST00000486868 SKAP1Q86WV1 359 aa14.52□□□□□ -0.09
PRKCB-207ENST00000486868 LINS1Q8NG48 757 aa14.52□□□□□ -0.09
PRKCB-207ENST00000486868 UTYO14607 1347 aa14.51□□□□□ -0.09
PRKCB-207ENST00000486868 UBTFL1P0CB47 393 aaPredicted RBP14.51□□□□□ -0.09
PRKCB-207ENST00000486868 CERKQ8TCT0 537 aa14.51□□□□□ -0.09
PRKCB-207ENST00000486868 TMOD3Q9NYL9 352 aa14.51□□□□□ -0.09
PRKCB-207ENST00000486868 SHANK3Q9BYB0 1731 aa14.5□□□□□ -0.09
PRKCB-207ENST00000486868 NWD2Q9ULI1 1742 aa14.5□□□□□ -0.09
PRKCB-207ENST00000486868 PRAMEF22A3QJZ6 481 aa14.5□□□□□ -0.09
PRKCB-207ENST00000486868 PROSER3Q2NL68 480 aa14.5□□□□□ -0.09
PRKCB-207ENST00000486868 ANKRD45Q5TZF3 282 aa14.5□□□□□ -0.09
PRKCB-207ENST00000486868 MAP3K2Q9Y2U5 619 aa14.5□□□□□ -0.09
PRKCB-207ENST00000486868 USP16Q9Y5T5 823 aa14.5□□□□□ -0.09
PRKCB-207ENST00000486868 PAPPAQ13219 1627 aa14.49□□□□□ -0.09
PRKCB-207ENST00000486868 EIF5BO60841 1220 aaKnown RBP14.49□□□□□ -0.09
PRKCB-207ENST00000486868 ADAMTS2O95450 1211 aa14.49□□□□□ -0.09
PRKCB-207ENST00000486868 MTX1Q13505 466 aa14.49□□□□□ -0.09
PRKCB-207ENST00000486868 UNC5CLQ8IV45 518 aa14.49□□□□□ -0.09
PRKCB-207ENST00000486868 SSH3Q8TE77 659 aa14.49□□□□□ -0.09
PRKCB-207ENST00000486868 ZBTB47Q9UFB7 747 aaPredicted RBP14.49□□□□□ -0.09
PRKCB-207ENST00000486868 KCPQ6ZWJ8 1503 aa14.49□□□□□ -0.09
PRKCB-207ENST00000486868 NRAPQ86VF7 1730 aa14.49□□□□□ -0.09
PRKCB-207ENST00000486868 GLI3P10071 1580 aa14.48□□□□□ -0.09
PRKCB-207ENST00000486868 ANP32AP39687 249 aaKnown RBP14.48□□□□□ -0.09
PRKCB-207ENST00000486868 BMP2KLQ5H9B9 411 aa14.48□□□□□ -0.09
PRKCB-207ENST00000486868 FNBP4Q8N3X1 1017 aaPredicted RBP14.48□□□□□ -0.09
PRKCB-207ENST00000486868 METTL22Q9BUU2 404 aaPredicted RBP14.48□□□□□ -0.09
PRKCB-207ENST00000486868 USP35Q9P2H5 1018 aa14.48□□□□□ -0.09
PRKCB-207ENST00000486868 BCL9O00512 1426 aa14.48□□□□□ -0.09
PRKCB-207ENST00000486868 COL15A1P39059 1388 aa14.47□□□□□ -0.09
PRKCB-207ENST00000486868 ANXA1P04083 346 aa14.47□□□□□ -0.09
PRKCB-207ENST00000486868 NEXNQ0ZGT2 675 aa14.47□□□□□ -0.09
PRKCB-207ENST00000486868 POLA2Q14181 598 aa14.47□□□□□ -0.09
PRKCB-207ENST00000486868 VPS72Q15906 364 aa14.47□□□□□ -0.09
PRKCB-207ENST00000486868 AEBP2Q6ZN18 517 aaPredicted RBP14.47□□□□□ -0.09
PRKCB-207ENST00000486868 ANKRD13DQ6ZTN6 518 aa14.47□□□□□ -0.09
PRKCB-207ENST00000486868 COPS6Q7L5N1 327 aa14.47□□□□□ -0.09
PRKCB-207ENST00000486868 RIC3Q7Z5B4 369 aa14.47□□□□□ -0.09
PRKCB-207ENST00000486868 PLBD2Q8NHP8 589 aa14.47□□□□□ -0.09
PRKCB-207ENST00000486868 XAGE3Q8WTP9 111 aa14.47□□□□□ -0.09
PRKCB-207ENST00000486868 PIGBQ92521 554 aa14.47□□□□□ -0.09
PRKCB-207ENST00000486868 LNPKQ9C0E8 428 aa14.47□□□□□ -0.09
PRKCB-207ENST00000486868 LRRFIP2Q9Y608 721 aaKnown RBP14.47□□□□□ -0.09
PRKCB-207ENST00000486868 UBR2Q8IWV8 1755 aa14.47□□□□□ -0.09
PRKCB-207ENST00000486868 RAB11FIP3O75154 756 aa14.46□□□□□ -0.09
PRKCB-207ENST00000486868 DDB1Q16531 1140 aa14.46□□□□□ -0.09
PRKCB-207ENST00000486868 HSP90AB4PQ58FF6 505 aa14.45□□□□□ -0.1
PRKCB-207ENST00000486868 ATG3Q9NT62 314 aa14.45□□□□□ -0.1
PRKCB-207ENST00000486868 LAMB4A4D0S4 1761 aa14.45□□□□□ -0.1
PRKCB-207ENST00000486868 NUTM2BA6NNL0 878 aaPredicted RBP14.44□□□□□ -0.1
PRKCB-207ENST00000486868 NUTM2EB1AL46 878 aaPredicted RBP14.44□□□□□ -0.1
PRKCB-207ENST00000486868 GRM8O00222 908 aa14.44□□□□□ -0.1
PRKCB-207ENST00000486868 STARD3NLO95772 234 aa14.44□□□□□ -0.1
PRKCB-207ENST00000486868 NUTM2AQ8IVF1 878 aaPredicted RBP14.44□□□□□ -0.1
PRKCB-207ENST00000486868 OSBPL3Q9H4L5 887 aa14.44□□□□□ -0.1
PRKCB-207ENST00000486868 C9orf78Q9NZ63 289 aaPredicted RBP14.44□□□□□ -0.1
PRKCB-207ENST00000486868 NOP58Q9Y2X3 529 aaKnown RBP14.44□□□□□ -0.1
PRKCB-207ENST00000486868 C5P01031 1676 aa14.43□□□□□ -0.1
PRKCB-207ENST00000486868 NEURL1BA8MQ27 555 aa14.43□□□□□ -0.1
PRKCB-207ENST00000486868 NBPF26B4DH59 902 aa14.43□□□□□ -0.1
PRKCB-207ENST00000486868 NBPF7P0C2Y1 421 aaPredicted RBP14.43□□□□□ -0.1
PRKCB-207ENST00000486868 NBPF14Q5TI25 921 aa14.43□□□□□ -0.1
PRKCB-207ENST00000486868 NBPF10Q6P3W6 841 aaKnown RBP14.43□□□□□ -0.1
PRKCB-207ENST00000486868 PLEKHM2Q8IWE5 1019 aa14.43□□□□□ -0.1
PRKCB-207ENST00000486868 NBPF15Q8N660 670 aa14.43□□□□□ -0.1
PRKCB-207ENST00000486868 BCL9LQ86UU0 1499 aa14.43□□□□□ -0.1
PRKCB-207ENST00000486868 WNK3Q9BYP7 1800 aa14.43□□□□□ -0.1
PRKCB-207ENST00000486868 TOGARAM1Q9Y4F4 1720 aa14.42□□□□□ -0.1
PRKCB-207ENST00000486868 PNMA6EA0A0J9YXQ4 647 aa14.42□□□□□ -0.1
PRKCB-207ENST00000486868 IGKV5-2P06315 115 aa14.42□□□□□ -0.1
PRKCB-207ENST00000486868 MYL6BP14649 208 aa14.42□□□□□ -0.1
PRKCB-207ENST00000486868 AIMP1Q12904 312 aaKnown RBP14.42□□□□□ -0.1
PRKCB-207ENST00000486868 GCKRQ14397 625 aa14.42□□□□□ -0.1
PRKCB-207ENST00000486868 PPP1R42Q7Z4L9 355 aa14.42□□□□□ -0.1
PRKCB-207ENST00000486868 TRIM28Q13263 835 aaKnown RBP14.41□□□□□ -0.1
PRKCB-207ENST00000486868 DDRGK1Q96HY6 314 aa14.41□□□□□ -0.1
PRKCB-207ENST00000486868 NGLY1Q96IV0 654 aa14.41□□□□□ -0.1
PRKCB-207ENST00000486868 IPO9Q96P70 1041 aaKnown RBP14.41□□□□□ -0.1
PRKCB-207ENST00000486868 LRRCC1Q9C099 1032 aa14.41□□□□□ -0.1
PRKCB-207ENST00000486868 UPF2Q9HAU5 1272 aaKnown RBP14.41□□□□□ -0.1
PRKCB-207ENST00000486868 ASAP1Q9ULH1 1129 aa14.41□□□□□ -0.1
PRKCB-207ENST00000486868 AOX1Q06278 1338 aa14.41□□□□□ -0.1
PRKCB-207ENST00000486868 PTCD1O75127 700 aaKnown RBP14.4□□□□□ -0.1
PRKCB-207ENST00000486868 SRGAP3O43295 1099 aa14.39□□□□□ -0.11
PRKCB-207ENST00000486868 A1BGP04217 495 aa14.39□□□□□ -0.11
PRKCB-207ENST00000486868 CWF19L2Q2TBE0 894 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms