RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 DCAF5Q96JK2 942 aa14.93□□□□□ -0.02
ERGIC3-215ENST00000486268 SIPA1L3O60292 1781 aaPredicted RBP14.93□□□□□ -0.02
ERGIC3-215ENST00000486268 TRIM37O94972 964 aa14.92□□□□□ -0.02
ERGIC3-215ENST00000486268 SLC4A2P04920 1241 aa14.92□□□□□ -0.02
ERGIC3-215ENST00000486268 EIF4A1P60842 406 aaKnown RBP14.92□□□□□ -0.02
ERGIC3-215ENST00000486268 ZBTB7BO15156 539 aaPredicted RBP14.91□□□□□ -0.02
ERGIC3-215ENST00000486268 PCDHB15Q9Y5E8 787 aa14.91□□□□□ -0.02
ERGIC3-215ENST00000486268 MRC1P22897 1456 aa14.9□□□□□ -0.02
ERGIC3-215ENST00000486268 IGHDP01880 384 aa14.9□□□□□ -0.02
ERGIC3-215ENST00000486268 CACNA1FO60840 1977 aa14.9□□□□□ -0.02
ERGIC3-215ENST00000486268 HEG1Q9ULI3 1381 aa14.89□□□□□ -0.03
ERGIC3-215ENST00000486268 PRIM1P49642 420 aaKnown RBP14.89□□□□□ -0.03
ERGIC3-215ENST00000486268 CCT4P50991 539 aaKnown RBP14.89□□□□□ -0.03
ERGIC3-215ENST00000486268 SLC52A2Q9HAB3 445 aa14.89□□□□□ -0.03
ERGIC3-215ENST00000486268 RGPD3A6NKT7 1758 aaPredicted RBP14.88□□□□□ -0.03
ERGIC3-215ENST00000486268 RGPD4Q7Z3J3 1758 aa14.88□□□□□ -0.03
ERGIC3-215ENST00000486268 HDGFL1Q5TGJ6 251 aa14.88□□□□□ -0.03
ERGIC3-215ENST00000486268 BCL11BQ9C0K0 894 aaPredicted RBP14.88□□□□□ -0.03
ERGIC3-215ENST00000486268 LY75O60449 1722 aa14.87□□□□□ -0.03
ERGIC3-215ENST00000486268 PAPPAQ13219 1627 aa14.87□□□□□ -0.03
ERGIC3-215ENST00000486268 PXDNLA1KZ92 1463 aa14.87□□□□□ -0.03
ERGIC3-215ENST00000486268 ERVV-2B6SEH9 535 aa14.86□□□□□ -0.03
ERGIC3-215ENST00000486268 FLIIQ13045 1269 aa14.86□□□□□ -0.03
ERGIC3-215ENST00000486268 SYTL4Q96C24 671 aaPredicted RBP14.86□□□□□ -0.03
ERGIC3-215ENST00000486268 RREB1Q92766 1687 aa14.86□□□□□ -0.03
ERGIC3-215ENST00000486268 ZNF790Q6PG37 636 aa14.85□□□□□ -0.03
ERGIC3-215ENST00000486268 DEFB132Q7Z7B7 95 aa14.85□□□□□ -0.03
ERGIC3-215ENST00000486268 PIGBQ92521 554 aa14.85□□□□□ -0.03
ERGIC3-215ENST00000486268 RBM19Q9Y4C8 960 aaKnown RBP14.85□□□□□ -0.03
ERGIC3-215ENST00000486268 GIGYF1O75420 1035 aaPredicted RBP14.84□□□□□ -0.03
ERGIC3-215ENST00000486268 CCDC125Q86Z20 511 aa14.84□□□□□ -0.03
ERGIC3-215ENST00000486268 SMC5Q8IY18 1101 aa14.84□□□□□ -0.03
ERGIC3-215ENST00000486268 DBF4Q9UBU7 674 aaPredicted RBP14.84□□□□□ -0.03
ERGIC3-215ENST00000486268 APBA3O96018 575 aa14.83□□□□□ -0.04
ERGIC3-215ENST00000486268 G2E3Q7L622 706 aa14.83□□□□□ -0.04
ERGIC3-215ENST00000486268 RPAP2Q8IXW5 612 aaPredicted RBP14.83□□□□□ -0.04
ERGIC3-215ENST00000486268 NFATC2IPQ8NCF5 419 aa14.83□□□□□ -0.04
ERGIC3-215ENST00000486268 GCC1Q96CN9 775 aa14.83□□□□□ -0.04
ERGIC3-215ENST00000486268 TMOD3Q9NYL9 352 aa14.83□□□□□ -0.04
ERGIC3-215ENST00000486268 NUP188Q5SRE5 1749 aa14.83□□□□□ -0.04
ERGIC3-215ENST00000486268 UBR2Q8IWV8 1755 aa14.83□□□□□ -0.04
ERGIC3-215ENST00000486268 CABP4P57796 275 aa14.82□□□□□ -0.04
ERGIC3-215ENST00000486268 EN1Q05925 392 aaPredicted RBP14.82□□□□□ -0.04
ERGIC3-215ENST00000486268 FKBP5Q13451 457 aaPredicted RBP14.82□□□□□ -0.04
ERGIC3-215ENST00000486268 TTC5Q8N0Z6 440 aa14.82□□□□□ -0.04
ERGIC3-215ENST00000486268 KCNQ3O43525 872 aa14.81□□□□□ -0.04
ERGIC3-215ENST00000486268 CAMKK2Q96RR4 588 aa14.81□□□□□ -0.04
ERGIC3-215ENST00000486268 ATG3Q9NT62 314 aa14.81□□□□□ -0.04
ERGIC3-215ENST00000486268 HYPKQ9NX55 129 aa14.81□□□□□ -0.04
ERGIC3-215ENST00000486268 N4BP2Q86UW6 1770 aaPredicted RBP14.8□□□□□ -0.04
ERGIC3-215ENST00000486268 TAF1LQ8IZX4 1826 aa14.8□□□□□ -0.04
ERGIC3-215ENST00000486268 PLSCR1O15162 318 aa14.8□□□□□ -0.04
ERGIC3-215ENST00000486268 GNAI3P08754 354 aa14.8□□□□□ -0.04
ERGIC3-215ENST00000486268 EIF2S2P20042 333 aaKnown RBP14.8□□□□□ -0.04
ERGIC3-215ENST00000486268 BAG6P46379 1132 aa14.8□□□□□ -0.04
ERGIC3-215ENST00000486268 SF3B2Q13435 895 aaKnown RBP14.8□□□□□ -0.04
ERGIC3-215ENST00000486268 EZH2Q15910 746 aaKnown RBP14.8□□□□□ -0.04
ERGIC3-215ENST00000486268 PROM2Q8N271 834 aa14.8□□□□□ -0.04
ERGIC3-215ENST00000486268 FMNL2Q96PY5 1086 aa14.8□□□□□ -0.04
ERGIC3-215ENST00000486268 ASAP1Q9ULH1 1129 aa14.8□□□□□ -0.04
ERGIC3-215ENST00000486268 KCPQ6ZWJ8 1503 aa14.8□□□□□ -0.04
ERGIC3-215ENST00000486268 SNRPA1P09661 255 aaKnown RBP14.79□□□□□ -0.04
ERGIC3-215ENST00000486268 PDE4AP27815 886 aa14.79□□□□□ -0.04
ERGIC3-215ENST00000486268 PALLDQ8WX93 1383 aa14.79□□□□□ -0.04
ERGIC3-215ENST00000486268 IBTKQ9P2D0 1353 aaPredicted RBP14.79□□□□□ -0.04
ERGIC3-215ENST00000486268 CHPF2Q9P2E5 772 aa14.79□□□□□ -0.04
ERGIC3-215ENST00000486268 PDZRN3Q9UPQ7 1066 aa14.79□□□□□ -0.04
ERGIC3-215ENST00000486268 TJP1Q07157 1748 aa14.78□□□□□ -0.04
ERGIC3-215ENST00000486268 ZNF831Q5JPB2 1677 aa14.78□□□□□ -0.04
ERGIC3-215ENST00000486268 ATP10DQ9P241 1426 aa14.78□□□□□ -0.04
ERGIC3-215ENST00000486268 SLC39A6Q13433 755 aa14.78□□□□□ -0.04
ERGIC3-215ENST00000486268 ANKRD44Q8N8A2 993 aa14.78□□□□□ -0.04
ERGIC3-215ENST00000486268 BACH2Q9BYV9 841 aa14.78□□□□□ -0.04
ERGIC3-215ENST00000486268 DDX21Q9NR30 783 aaKnown RBP eCLIP14.78□□□□□ -0.04
ERGIC3-215ENST00000486268 CICQ96RK0 1608 aaPredicted RBP14.77□□□□□ -0.04
ERGIC3-215ENST00000486268 ERBB4Q15303 1308 aa14.77□□□□□ -0.04
ERGIC3-215ENST00000486268 HMMRO75330 724 aa14.77□□□□□ -0.05
ERGIC3-215ENST00000486268 DDX58O95786 925 aaKnown RBP14.77□□□□□ -0.05
ERGIC3-215ENST00000486268 RGS3P49796 1198 aa14.77□□□□□ -0.05
ERGIC3-215ENST00000486268 FAM161AQ3B820 660 aa14.77□□□□□ -0.05
ERGIC3-215ENST00000486268 SLC4A10Q6U841 1118 aa14.77□□□□□ -0.05
ERGIC3-215ENST00000486268 NECTIN2Q92692 538 aa14.77□□□□□ -0.05
ERGIC3-215ENST00000486268 HDAC5Q9UQL6 1122 aa14.77□□□□□ -0.05
ERGIC3-215ENST00000486268 COL5A3P25940 1745 aaPredicted RBP14.77□□□□□ -0.05
ERGIC3-215ENST00000486268 C5P01031 1676 aa14.77□□□□□ -0.05
ERGIC3-215ENST00000486268 F6X3S4 739 aa14.76□□□□□ -0.05
ERGIC3-215ENST00000486268 GNAI2P04899 355 aa14.76□□□□□ -0.05
ERGIC3-215ENST00000486268 NUCB1Q02818 461 aa14.76□□□□□ -0.05
ERGIC3-215ENST00000486268 TXNRD1Q16881 649 aa14.76□□□□□ -0.05
ERGIC3-215ENST00000486268 DNAAF4Q8WXU2 420 aa14.76□□□□□ -0.05
ERGIC3-215ENST00000486268 SLC4A9Q96Q91 983 aa14.76□□□□□ -0.05
ERGIC3-215ENST00000486268 SRCIN1Q9C0H9 1055 aa14.76□□□□□ -0.05
ERGIC3-215ENST00000486268 LRRC4BQ9NT99 713 aa14.76□□□□□ -0.05
ERGIC3-215ENST00000486268 KCNQ4P56696 695 aa14.75□□□□□ -0.05
ERGIC3-215ENST00000486268 KSR2Q6VAB6 950 aa14.75□□□□□ -0.05
ERGIC3-215ENST00000486268 SMARCC1Q92922 1105 aaPredicted RBP14.75□□□□□ -0.05
ERGIC3-215ENST00000486268 ZNF496Q96IT1 587 aaPredicted RBP14.75□□□□□ -0.05
ERGIC3-215ENST00000486268 MEIS3Q99687 375 aa14.75□□□□□ -0.05
ERGIC3-215ENST00000486268 PHAXQ9H814 394 aaKnown RBP14.75□□□□□ -0.05
ERGIC3-215ENST00000486268 TUBGCP6Q96RT7 1819 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms