RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 FOXD4L4Q8WXT5 416 aaPredicted RBP21.34■■□□□ 1.01
TNXB-205ENST00000486148 PRDM4Q9UKN5 801 aa21.34■■□□□ 1.01
TNXB-205ENST00000486148 SURF6O75683 361 aaKnown RBP21.33■■□□□ 1.01
TNXB-205ENST00000486148 NBPF7P0C2Y1 421 aaPredicted RBP21.33■■□□□ 1.01
TNXB-205ENST00000486148 ZNF445P59923 1031 aa21.33■■□□□ 1.01
TNXB-205ENST00000486148 POLA2Q14181 598 aa21.33■■□□□ 1.01
TNXB-205ENST00000486148 NOL8Q76FK4 1167 aaKnown RBP21.33■■□□□ 1.01
TNXB-205ENST00000486148 CHPF2Q9P2E5 772 aa21.33■■□□□ 1.01
TNXB-205ENST00000486148 AOX1Q06278 1338 aa21.33■■□□□ 1.01
TNXB-205ENST00000486148 MED1Q15648 1581 aaPredicted RBP21.33■■□□□ 1.01
TNXB-205ENST00000486148 ANAPC15P60006 121 aa21.33■■□□□ 1.01
TNXB-205ENST00000486148 GPT2Q8TD30 523 aa21.33■■□□□ 1.01
TNXB-205ENST00000486148 NFAT5O94916 1531 aa21.33■■□□□ 1
TNXB-205ENST00000486148 ZBTB7CA1YPR0 619 aa21.32■■□□□ 1
TNXB-205ENST00000486148 MAP4K4O95819 1239 aaPredicted RBP21.32■■□□□ 1
TNXB-205ENST00000486148 MCM2P49736 904 aa21.32■■□□□ 1
TNXB-205ENST00000486148 CUL4AQ13619 759 aa21.32■■□□□ 1
TNXB-205ENST00000486148 TRIM44Q96DX7 344 aaPredicted RBP21.32■■□□□ 1
TNXB-205ENST00000486148 KIAA1211Q6ZU35 1233 aa21.32■■□□□ 1
TNXB-205ENST00000486148 SRGAP3O43295 1099 aa21.31■■□□□ 1
TNXB-205ENST00000486148 ANXA1P04083 346 aa21.31■■□□□ 1
TNXB-205ENST00000486148 RHPN1Q8TCX5 695 aa21.31■■□□□ 1
TNXB-205ENST00000486148 RBM27Q9P2N5 1060 aaKnown RBP21.31■■□□□ 1
TNXB-205ENST00000486148 PI4KAP2A4QPH2 592 aa21.31■■□□□ 1
TNXB-205ENST00000486148 RAB11FIP3O75154 756 aa21.31■■□□□ 1
TNXB-205ENST00000486148 BEND3Q5T5X7 828 aa21.31■■□□□ 1
TNXB-205ENST00000486148 PI4KAP1Q8N8J0 262 aa21.31■■□□□ 1
TNXB-205ENST00000486148 UPF3BQ9BZI7 483 aaKnown RBP21.31■■□□□ 1
TNXB-205ENST00000486148 KDM3BQ7LBC6 1761 aa21.3■■□□□ 1
TNXB-205ENST00000486148 PI4K2BQ8TCG2 481 aa21.3■■□□□ 1
TNXB-205ENST00000486148 LRRC59Q96AG4 307 aaKnown RBP21.3■■□□□ 1
TNXB-205ENST00000486148 IL17RAQ96F46 866 aa21.3■■□□□ 1
TNXB-205ENST00000486148 RGPD2P0DJD1 1756 aa21.3■■□□□ 1
TNXB-205ENST00000486148 DNAAF4Q8WXU2 420 aa21.29■■□□□ 1
TNXB-205ENST00000486148 CCDC173Q0VFZ6 552 aa21.29■■□□□ 1
TNXB-205ENST00000486148 PPP1R9BQ96SB3 815 aa21.29■■□□□ 1
TNXB-205ENST00000486148 BRD1O95696 1058 aa21.28■■□□□ 1
TNXB-205ENST00000486148 HOXB7P09629 217 aa21.28■■□□□ 1
TNXB-205ENST00000486148 NSFL1CQ9UNZ2 370 aaKnown RBP21.28■■□□□ 1
TNXB-205ENST00000486148 MPRIPQ6WCQ1 1025 aa21.27■■□□□ 1
TNXB-205ENST00000486148 ESCO1Q5FWF5 840 aa21.27■■□□□ 1
TNXB-205ENST00000486148 ZNF530Q6P9A1 599 aaPredicted RBP21.27■■□□□ 1
TNXB-205ENST00000486148 KIF1BPQ96EK5 621 aa21.27■■□□□ 1
TNXB-205ENST00000486148 CHD2O14647 1828 aaKnown RBP21.26■□□□□ 0.99
TNXB-205ENST00000486148 ADCY9O60503 1353 aa21.26■□□□□ 0.99
TNXB-205ENST00000486148 BTBD11A6QL63 1104 aa21.26■□□□□ 0.99
TNXB-205ENST00000486148 HSPA4P34932 840 aa21.26■□□□□ 0.99
TNXB-205ENST00000486148 PSME1Q06323 249 aa21.26■□□□□ 0.99
TNXB-205ENST00000486148 TEFQ10587 303 aa21.26■□□□□ 0.99
TNXB-205ENST00000486148 INTS4Q96HW7 963 aaKnown RBP21.26■□□□□ 0.99
TNXB-205ENST00000486148 RBSNQ9H1K0 784 aa21.26■□□□□ 0.99
TNXB-205ENST00000486148 PRIM1P49642 420 aaKnown RBP21.25■□□□□ 0.99
TNXB-205ENST00000486148 AKAP4Q5JQC9 854 aa21.25■□□□□ 0.99
TNXB-205ENST00000486148 TMEM63CQ9P1W3 806 aa21.25■□□□□ 0.99
TNXB-205ENST00000486148 LMO7Q8WWI1 1683 aa21.25■□□□□ 0.99
TNXB-205ENST00000486148 SGSM2O43147 1006 aa21.24■□□□□ 0.99
TNXB-205ENST00000486148 RBM10P98175 930 aaKnown RBP21.23■□□□□ 0.99
TNXB-205ENST00000486148 KCNH5Q8NCM2 988 aa21.23■□□□□ 0.99
TNXB-205ENST00000486148 PXDNQ92626 1479 aa21.23■□□□□ 0.99
TNXB-205ENST00000486148 EPB41L2O43491 1005 aaKnown RBP21.22■□□□□ 0.99
TNXB-205ENST00000486148 ANP32BQ92688 251 aaKnown RBP21.22■□□□□ 0.99
TNXB-205ENST00000486148 RAD50Q92878 1312 aa21.22■□□□□ 0.99
TNXB-205ENST00000486148 PLEKHO1Q53GL0 409 aaPredicted RBP21.22■□□□□ 0.99
TNXB-205ENST00000486148 RNMTO43148 476 aaKnown RBP21.21■□□□□ 0.99
TNXB-205ENST00000486148 PROSER3Q2NL68 480 aa21.21■□□□□ 0.99
TNXB-205ENST00000486148 CNTROBQ8N137 903 aa21.21■□□□□ 0.99
TNXB-205ENST00000486148 LSG1Q9H089 658 aaKnown RBP21.21■□□□□ 0.99
TNXB-205ENST00000486148 ANKLE2Q86XL3 938 aa21.21■□□□□ 0.99
TNXB-205ENST00000486148 SYCE3A1L190 88 aa21.2■□□□□ 0.98
TNXB-205ENST00000486148 XPCQ01831 940 aaPredicted RBP21.2■□□□□ 0.98
TNXB-205ENST00000486148 DBF4Q9UBU7 674 aaPredicted RBP21.2■□□□□ 0.98
TNXB-205ENST00000486148 SNX14Q9Y5W7 946 aa21.2■□□□□ 0.98
TNXB-205ENST00000486148 PHRF1Q9P1Y6 1649 aaKnown RBP21.2■□□□□ 0.98
TNXB-205ENST00000486148 CHMP4AQ9BY43 222 aa21.2■□□□□ 0.98
TNXB-205ENST00000486148 PRAMEF22A3QJZ6 481 aa21.19■□□□□ 0.98
TNXB-205ENST00000486148 OFD1O75665 1012 aa21.19■□□□□ 0.98
TNXB-205ENST00000486148 CWC27Q6UX04 472 aaKnown RBP21.19■□□□□ 0.98
TNXB-205ENST00000486148 RASEFQ8IZ41 740 aa21.19■□□□□ 0.98
TNXB-205ENST00000486148 MAP3K2Q9Y2U5 619 aa21.19■□□□□ 0.98
TNXB-205ENST00000486148 ADGRL3Q9HAR2 1447 aa21.19■□□□□ 0.98
TNXB-205ENST00000486148 OS9Q13438 667 aaPredicted RBP21.19■□□□□ 0.98
TNXB-205ENST00000486148 FOXD4L6Q3SYB3 417 aaPredicted RBP21.19■□□□□ 0.98
TNXB-205ENST00000486148 HSP90AB4PQ58FF6 505 aa21.19■□□□□ 0.98
TNXB-205ENST00000486148 LRSAM1Q6UWE0 723 aa21.19■□□□□ 0.98
TNXB-205ENST00000486148 FOXD4L3Q6VB84 417 aaPredicted RBP21.19■□□□□ 0.98
TNXB-205ENST00000486148 USP42Q9H9J4 1324 aaKnown RBP21.19■□□□□ 0.98
TNXB-205ENST00000486148 GCP02774 474 aa21.18■□□□□ 0.98
TNXB-205ENST00000486148 GIGYF1O75420 1035 aaPredicted RBP21.18■□□□□ 0.98
TNXB-205ENST00000486148 MTX1Q13505 466 aa21.18■□□□□ 0.98
TNXB-205ENST00000486148 SPG7Q9UQ90 795 aa21.18■□□□□ 0.98
TNXB-205ENST00000486148 CRYBG1Q9Y4K1 1723 aa21.18■□□□□ 0.98
TNXB-205ENST00000486148 MBD3O95983 291 aa21.17■□□□□ 0.98
TNXB-205ENST00000486148 AMOTQ4VCS5 1084 aa21.17■□□□□ 0.98
TNXB-205ENST00000486148 C1orf141Q5JVX7 400 aa21.17■□□□□ 0.98
TNXB-205ENST00000486148 ARHGEF25Q86VW2 580 aa21.17■□□□□ 0.98
TNXB-205ENST00000486148 ORAI2Q96SN7 254 aa21.17■□□□□ 0.98
TNXB-205ENST00000486148 CWF19L2Q2TBE0 894 aaKnown RBP21.17■□□□□ 0.98
TNXB-205ENST00000486148 TTC14Q96N46 770 aa21.17■□□□□ 0.98
TNXB-205ENST00000486148 PA2G4Q9UQ80 394 aaKnown RBP21.17■□□□□ 0.98
TNXB-205ENST00000486148 ZSCAN30Q86W11 494 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms