RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 SULT6B1Q6IMI4 303 aa26.47■■□□□ 1.83
CHRD-216ENST00000486066 USPL1Q5W0Q7 1092 aa26.46■■□□□ 1.83
CHRD-216ENST00000486066 DNAJC10Q8IXB1 793 aa26.46■■□□□ 1.83
CHRD-216ENST00000486066 CYP19A1P11511 503 aaPredicted RBP26.45■■□□□ 1.82
CHRD-216ENST00000486066 BCL2L12Q9HB09 334 aa26.45■■□□□ 1.82
CHRD-216ENST00000486066 RASSF7Q02833 373 aa26.44■■□□□ 1.82
CHRD-216ENST00000486066 NFIXQ14938 502 aa26.44■■□□□ 1.82
CHRD-216ENST00000486066 SLC52A2Q9HAB3 445 aa26.44■■□□□ 1.82
CHRD-216ENST00000486066 NARFQ9UHQ1 456 aa26.44■■□□□ 1.82
CHRD-216ENST00000486066 AKAP4Q5JQC9 854 aa26.43■■□□□ 1.82
CHRD-216ENST00000486066 SMC1BQ8NDV3 1235 aa26.43■■□□□ 1.82
CHRD-216ENST00000486066 LGR6Q9HBX8 967 aa26.42■■□□□ 1.82
CHRD-216ENST00000486066 COL15A1P39059 1388 aa26.42■■□□□ 1.82
CHRD-216ENST00000486066 ANKRD31Q8N7Z5 1873 aa26.42■■□□□ 1.82
CHRD-216ENST00000486066 ZPR1O75312 459 aa26.41■■□□□ 1.82
CHRD-216ENST00000486066 POLR3GLQ9BT43 218 aa26.41■■□□□ 1.82
CHRD-216ENST00000486066 DICER1Q9UPY3 1922 aaKnown RBP26.4■■□□□ 1.82
CHRD-216ENST00000486066 GLTPD2A6NH11 291 aa26.4■■□□□ 1.82
CHRD-216ENST00000486066 LMNB1P20700 586 aa26.4■■□□□ 1.82
CHRD-216ENST00000486066 ZBTB1Q9Y2K1 713 aa26.4■■□□□ 1.82
CHRD-216ENST00000486066 CARMIL3Q8ND23 1372 aa26.4■■□□□ 1.82
CHRD-216ENST00000486066 MORC1Q86VD1 984 aa26.39■■□□□ 1.82
CHRD-216ENST00000486066 NFKBIEO00221 500 aa26.38■■□□□ 1.81
CHRD-216ENST00000486066 FER1L6Q2WGJ9 1857 aa26.38■■□□□ 1.81
CHRD-216ENST00000486066 POTECB2RU33 542 aa26.37■■□□□ 1.81
CHRD-216ENST00000486066 RNMTO43148 476 aaKnown RBP26.37■■□□□ 1.81
CHRD-216ENST00000486066 SLC39A6Q13433 755 aa26.37■■□□□ 1.81
CHRD-216ENST00000486066 CLSPNQ9HAW4 1339 aa26.37■■□□□ 1.81
CHRD-216ENST00000486066 COL11A2P13942 1736 aaPredicted RBP26.36■■□□□ 1.81
CHRD-216ENST00000486066 SCN7AQ01118 1682 aa26.36■■□□□ 1.81
CHRD-216ENST00000486066 HSPA5P11021 654 aaKnown RBP26.36■■□□□ 1.81
CHRD-216ENST00000486066 VSIG10Q8N0Z9 540 aa26.36■■□□□ 1.81
CHRD-216ENST00000486066 SERPINB2P05120 415 aa26.35■■□□□ 1.81
CHRD-216ENST00000486066 VEGFAP15692 232 aaPredicted RBP26.35■■□□□ 1.81
CHRD-216ENST00000486066 TRIM26Q12899 539 aaPredicted RBP26.34■■□□□ 1.81
CHRD-216ENST00000486066 AMER1Q5JTC6 1135 aaPredicted RBP26.34■■□□□ 1.81
CHRD-216ENST00000486066 TTLL6Q8N841 843 aa26.34■■□□□ 1.81
CHRD-216ENST00000486066 EIF4G2P78344 907 aaKnown RBP eCLIP26.33■■□□□ 1.81
CHRD-216ENST00000486066 SIPA1L3O60292 1781 aaPredicted RBP26.33■■□□□ 1.8
CHRD-216ENST00000486066 EIF5P55010 431 aaKnown RBP26.31■■□□□ 1.8
CHRD-216ENST00000486066 C2CD5Q86YS7 1000 aa26.3■■□□□ 1.8
CHRD-216ENST00000486066 MTHFSDQ2M296 383 aaKnown RBP26.29■■□□□ 1.8
CHRD-216ENST00000486066 TNS4Q8IZW8 715 aa26.28■■□□□ 1.8
CHRD-216ENST00000486066 ARFGEF2Q9Y6D5 1785 aa26.28■■□□□ 1.8
CHRD-216ENST00000486066 H0YIN7 160 aa26.26■■□□□ 1.79
CHRD-216ENST00000486066 HSPA1AP0DMV8 641 aaKnown RBP26.26■■□□□ 1.79
CHRD-216ENST00000486066 HSPA1BP0DMV9 641 aaKnown RBP26.26■■□□□ 1.79
CHRD-216ENST00000486066 HMOX1P09601 288 aa26.25■■□□□ 1.79
CHRD-216ENST00000486066 KNSTRNQ9Y448 316 aa26.25■■□□□ 1.79
CHRD-216ENST00000486066 BCORQ6W2J9 1755 aa26.24■■□□□ 1.79
CHRD-216ENST00000486066 COL3A1P02461 1466 aaPredicted RBP26.23■■□□□ 1.79
CHRD-216ENST00000486066 SLX4Q8IY92 1834 aa26.23■■□□□ 1.79
CHRD-216ENST00000486066 LTBP3Q9NS15 1303 aa26.23■■□□□ 1.79
CHRD-216ENST00000486066 TBC1D9BQ66K14 1250 aa26.23■■□□□ 1.79
CHRD-216ENST00000486066 BRIP1Q9BX63 1249 aa26.23■■□□□ 1.79
CHRD-216ENST00000486066 CANXP27824 592 aaKnown RBP26.22■■□□□ 1.79
CHRD-216ENST00000486066 PRR5LQ6MZQ0 368 aa26.22■■□□□ 1.79
CHRD-216ENST00000486066 PDZRN3Q9UPQ7 1066 aa26.22■■□□□ 1.79
CHRD-216ENST00000486066 CACNA1SQ13698 1873 aa26.21■■□□□ 1.79
CHRD-216ENST00000486066 HEG1Q9ULI3 1381 aa26.2■■□□□ 1.79
CHRD-216ENST00000486066 ZNF496Q96IT1 587 aaPredicted RBP26.2■■□□□ 1.78
CHRD-216ENST00000486066 A0A087WZG4 1122 aa26.19■■□□□ 1.78
CHRD-216ENST00000486066 CAPN15O75808 1086 aa26.19■■□□□ 1.78
CHRD-216ENST00000486066 STARD3NLO95772 234 aa26.19■■□□□ 1.78
CHRD-216ENST00000486066 PER1O15534 1290 aaPredicted RBP26.18■■□□□ 1.78
CHRD-216ENST00000486066 BICDL1Q6ZP65 573 aa26.18■■□□□ 1.78
CHRD-216ENST00000486066 C21orf2O43822 256 aa26.17■■□□□ 1.78
CHRD-216ENST00000486066 PDE6BP35913 854 aa26.17■■□□□ 1.78
CHRD-216ENST00000486066 DPY19L2Q6NUT2 758 aa26.17■■□□□ 1.78
CHRD-216ENST00000486066 IL17REQ8NFR9 667 aa26.17■■□□□ 1.78
CHRD-216ENST00000486066 IL6STP40189 918 aaPredicted RBP26.16■■□□□ 1.78
CHRD-216ENST00000486066 ERFEQ4G0M1 354 aa26.16■■□□□ 1.78
CHRD-216ENST00000486066 ZNF790Q6PG37 636 aa26.16■■□□□ 1.78
CHRD-216ENST00000486066 CREBZFQ9NS37 354 aa26.16■■□□□ 1.78
CHRD-216ENST00000486066 SCN4AP35499 1836 aa26.16■■□□□ 1.78
CHRD-216ENST00000486066 DIAPH1O60610 1272 aaKnown RBP26.15■■□□□ 1.78
CHRD-216ENST00000486066 POTEIP0CG38 1075 aa26.15■■□□□ 1.78
CHRD-216ENST00000486066 POTEJP0CG39 1038 aa26.15■■□□□ 1.78
CHRD-216ENST00000486066 ZNF622Q969S3 477 aaKnown RBP eCLIP26.15■■□□□ 1.78
CHRD-216ENST00000486066 CAMTA2O94983 1202 aa26.14■■□□□ 1.78
CHRD-216ENST00000486066 CHADLQ6NUI6 762 aa26.14■■□□□ 1.78
CHRD-216ENST00000486066 CEMIPQ8WUJ3 1361 aa26.14■■□□□ 1.78
CHRD-216ENST00000486066 TTC5Q8N0Z6 440 aa26.13■■□□□ 1.77
CHRD-216ENST00000486066 CCDC24Q8N4L8 307 aa26.13■■□□□ 1.77
CHRD-216ENST00000486066 TEX13AQ9BXU3 409 aaPredicted RBP26.13■■□□□ 1.77
CHRD-216ENST00000486066 TAOK3Q9H2K8 898 aa26.13■■□□□ 1.77
CHRD-216ENST00000486066 TBC1D2BQ9UPU7 963 aa26.13■■□□□ 1.77
CHRD-216ENST00000486066 ADAMTSL1Q8N6G6 1762 aa26.12■■□□□ 1.77
CHRD-216ENST00000486066 SRGNP10124 158 aa26.12■■□□□ 1.77
CHRD-216ENST00000486066 STYK1Q6J9G0 422 aa26.12■■□□□ 1.77
CHRD-216ENST00000486066 C7orf43Q8WVR3 580 aa26.12■■□□□ 1.77
CHRD-216ENST00000486066 KIF7Q2M1P5 1343 aa26.12■■□□□ 1.77
CHRD-216ENST00000486066 PASKQ96RG2 1323 aa26.12■■□□□ 1.77
CHRD-216ENST00000486066 DDNO94850 711 aaPredicted RBP26.1■■□□□ 1.77
CHRD-216ENST00000486066 PRPF40BQ6NWY9 871 aaKnown RBP26.1■■□□□ 1.77
CHRD-216ENST00000486066 L3MBTL3Q96JM7 780 aaPredicted RBP26.1■■□□□ 1.77
CHRD-216ENST00000486066 CNKSR1Q969H4 720 aa26.09■■□□□ 1.77
CHRD-216ENST00000486066 ZNF219Q9P2Y4 722 aaPredicted RBP26.09■■□□□ 1.77
CHRD-216ENST00000486066 CNTNAP1P78357 1384 aa26.08■■□□□ 1.77
CHRD-216ENST00000486066 GNAT3A8MTJ3 354 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms