RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 SH3D19Q5HYK7 790 aa6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 CC2D1BQ5T0F9 858 aaKnown RBP6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 SKAP1Q86WV1 359 aa6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 PROCA1Q8NCQ7 364 aaPredicted RBP6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 SNIP1Q8TAD8 396 aaKnown RBP6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 BAP1Q92560 729 aa6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 TOR4AQ9NXH8 423 aa6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 ADAMTS8Q9UP79 889 aa6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 ARAP3Q8WWN8 1544 aa6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 USP32Q8NFA0 1604 aa6.03□□□□□ -1.44
SMARCC1-206ENST00000485737 TET3O43151 1660 aa6.02□□□□□ -1.45
SMARCC1-206ENST00000485737 E9PSI1 815 aa6.02□□□□□ -1.45
SMARCC1-206ENST00000485737 SH3BP2P78314 561 aa6.02□□□□□ -1.45
SMARCC1-206ENST00000485737 PDE3AQ14432 1141 aa6.02□□□□□ -1.45
SMARCC1-206ENST00000485737 CLTCL1P53675 1640 aa6.02□□□□□ -1.45
SMARCC1-206ENST00000485737 SBNO2Q9Y2G9 1366 aa6.02□□□□□ -1.45
SMARCC1-206ENST00000485737 INO80Q9ULG1 1556 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 SHPRHQ149N8 1683 aa6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 ZFYVE16Q7Z3T8 1539 aa6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 J3QL48 77 aa6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 ST8SIA5O15466 376 aa6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 FRAT2O75474 233 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 ALDH1A1P00352 501 aa6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 HNRNPMP52272 730 aaKnown RBP eCLIP6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 ZNF511Q8NB15 262 aa6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 KNSTRNQ9Y448 316 aa6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 POLR3AO14802 1390 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 KANK1Q14678 1352 aa6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 ERVK-7P63135 1459 aa6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 NRXN1Q9ULB1 1477 aa6.01□□□□□ -1.45
SMARCC1-206ENST00000485737 RTEL1-TNFRSF6BF6WH68 1400 aa6□□□□□ -1.45
SMARCC1-206ENST00000485737 ABCA6Q8N139 1617 aa6□□□□□ -1.45
SMARCC1-206ENST00000485737 MAP3K4Q9Y6R4 1608 aa6□□□□□ -1.45
SMARCC1-206ENST00000485737 F12P00748 615 aaPredicted RBP6□□□□□ -1.45
SMARCC1-206ENST00000485737 BECN1Q14457 450 aa6□□□□□ -1.45
SMARCC1-206ENST00000485737 AGERQ15109 404 aa6□□□□□ -1.45
SMARCC1-206ENST00000485737 L1TD1Q5T7N2 865 aaKnown RBP6□□□□□ -1.45
SMARCC1-206ENST00000485737 CHMP7Q8WUX9 453 aaPredicted RBP6□□□□□ -1.45
SMARCC1-206ENST00000485737 ADGRL1O94910 1474 aa6□□□□□ -1.45
SMARCC1-206ENST00000485737 IFT172Q9UG01 1749 aa5.99□□□□□ -1.45
SMARCC1-206ENST00000485737 ADGRB2O60241 1585 aa5.99□□□□□ -1.45
SMARCC1-206ENST00000485737 SETBP1Q9Y6X0 1596 aa5.99□□□□□ -1.45
SMARCC1-206ENST00000485737 WIPF1O43516 503 aa5.99□□□□□ -1.45
SMARCC1-206ENST00000485737 SMPD1P17405 629 aa5.99□□□□□ -1.45
SMARCC1-206ENST00000485737 BRPF1P55201 1214 aaPredicted RBP5.99□□□□□ -1.45
SMARCC1-206ENST00000485737 CTDSPL2Q05D32 466 aa5.99□□□□□ -1.45
SMARCC1-206ENST00000485737 CLUAP1Q96AJ1 413 aa5.99□□□□□ -1.45
SMARCC1-206ENST00000485737 ANTXR1Q9H6X2 564 aa5.99□□□□□ -1.45
SMARCC1-206ENST00000485737 WASF2Q9Y6W5 498 aa5.99□□□□□ -1.45
SMARCC1-206ENST00000485737 PLCH2O75038 1416 aa5.99□□□□□ -1.45
SMARCC1-206ENST00000485737 ZC3H13Q5T200 1668 aaKnown RBP5.98□□□□□ -1.45
SMARCC1-206ENST00000485737 AXIN1O15169 862 aa5.98□□□□□ -1.45
SMARCC1-206ENST00000485737 AP1G2O75843 785 aa5.98□□□□□ -1.45
SMARCC1-206ENST00000485737 WFS1O76024 890 aa5.98□□□□□ -1.45
SMARCC1-206ENST00000485737 RGS3P49796 1198 aa5.98□□□□□ -1.45
SMARCC1-206ENST00000485737 SMCPP49901 116 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-206ENST00000485737 PCMTD1Q96MG8 357 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-206ENST00000485737 TBC1D32Q96NH3 1257 aa5.98□□□□□ -1.45
SMARCC1-206ENST00000485737 SENP2Q9HC62 589 aa5.98□□□□□ -1.45
SMARCC1-206ENST00000485737 AAASQ9NRG9 546 aa5.98□□□□□ -1.45
SMARCC1-206ENST00000485737 TLL2Q9Y6L7 1015 aa5.98□□□□□ -1.45
SMARCC1-206ENST00000485737 NCOA3Q9Y6Q9 1424 aa5.98□□□□□ -1.45
SMARCC1-206ENST00000485737 CENPJQ9HC77 1338 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-206ENST00000485737 UHRF1BP1LA0JNW5 1464 aa5.97□□□□□ -1.45
SMARCC1-206ENST00000485737 FSD2A1L4K1 749 aa5.97□□□□□ -1.45
SMARCC1-206ENST00000485737 AVPP01185 164 aa5.97□□□□□ -1.45
SMARCC1-206ENST00000485737 RGL3Q3MIN7 710 aa5.97□□□□□ -1.45
SMARCC1-206ENST00000485737 FBXO31Q5XUX0 539 aaPredicted RBP5.97□□□□□ -1.45
SMARCC1-206ENST00000485737 PMFBP1Q8TBY8 1022 aa5.97□□□□□ -1.45
SMARCC1-206ENST00000485737 FOXJ1Q92949 421 aa5.97□□□□□ -1.45
SMARCC1-206ENST00000485737 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMARCC1-206ENST00000485737 MROH1Q8NDA8 1641 aa5.96□□□□□ -1.45
SMARCC1-206ENST00000485737 ADGRB3O60242 1522 aa5.96□□□□□ -1.46
SMARCC1-206ENST00000485737 EFCAB6Q5THR3 1501 aa5.96□□□□□ -1.46
SMARCC1-206ENST00000485737 LMTK2Q8IWU2 1503 aa5.96□□□□□ -1.46
SMARCC1-206ENST00000485737 IGHDP01880 384 aa5.96□□□□□ -1.46
SMARCC1-206ENST00000485737 VARSP26640 1264 aaKnown RBP5.96□□□□□ -1.46
SMARCC1-206ENST00000485737 ARID5BQ14865 1188 aa5.96□□□□□ -1.46
SMARCC1-206ENST00000485737 ARMC2Q8NEN0 867 aa5.96□□□□□ -1.46
SMARCC1-206ENST00000485737 LRRN4Q8WUT4 740 aa5.96□□□□□ -1.46
SMARCC1-206ENST00000485737 HPS1Q92902 700 aa5.96□□□□□ -1.46
SMARCC1-206ENST00000485737 KIFC2Q96AC6 838 aa5.96□□□□□ -1.46
SMARCC1-206ENST00000485737 POGKQ9P215 609 aa5.96□□□□□ -1.46
SMARCC1-206ENST00000485737 ISY1Q9ULR0 285 aaKnown RBP5.96□□□□□ -1.46
SMARCC1-206ENST00000485737 ZNF518AQ6AHZ1 1483 aa5.96□□□□□ -1.46
SMARCC1-206ENST00000485737 MAGEB6P1A0A0J9YX57 407 aa5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 APAF1O14727 1248 aa5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 SIAH2O43255 324 aa5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 BCAR3O75815 825 aa5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 CCDC27Q2M243 656 aa5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 NBPF14Q5TI25 921 aa5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 PPP2R2DQ66LE6 453 aa5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 BPHLQ86WA6 291 aaPredicted RBP5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 FAM174AQ8TBP5 190 aa5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 UPF2Q9HAU5 1272 aaKnown RBP5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 REREQ9P2R6 1566 aa5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 DACH1Q9UI36 760 aa5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 TRAPPC8Q9Y2L5 1435 aa5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 FANCAO15360 1455 aa5.95□□□□□ -1.46
SMARCC1-206ENST00000485737 NR6A1Q15406 480 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms