RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 NARFQ9UHQ1 456 aa25.91■■□□□ 1.74
COL27A1-205ENST00000485397 BRCA1P38398 1863 aaKnown RBP25.91■■□□□ 1.74
COL27A1-205ENST00000485397 COL15A1P39059 1388 aa25.91■■□□□ 1.74
COL27A1-205ENST00000485397 GAS2L2Q8NHY3 880 aa25.9■■□□□ 1.74
COL27A1-205ENST00000485397 GNAT3A8MTJ3 354 aa25.89■■□□□ 1.74
COL27A1-205ENST00000485397 CANXP27824 592 aaKnown RBP25.89■■□□□ 1.74
COL27A1-205ENST00000485397 NFIXQ14938 502 aa25.89■■□□□ 1.74
COL27A1-205ENST00000485397 DALRD3Q5D0E6 543 aaKnown RBP25.89■■□□□ 1.74
COL27A1-205ENST00000485397 TTC5Q8N0Z6 440 aa25.89■■□□□ 1.74
COL27A1-205ENST00000485397 BCL2L12Q9HB09 334 aa25.89■■□□□ 1.74
COL27A1-205ENST00000485397 TEFQ10587 303 aa25.87■■□□□ 1.73
COL27A1-205ENST00000485397 ZNF496Q96IT1 587 aaPredicted RBP25.87■■□□□ 1.73
COL27A1-205ENST00000485397 C9orf131Q5VYM1 1079 aa25.86■■□□□ 1.73
COL27A1-205ENST00000485397 PHACTR3Q96KR7 559 aa25.86■■□□□ 1.73
COL27A1-205ENST00000485397 UBR2Q8IWV8 1755 aa25.85■■□□□ 1.73
COL27A1-205ENST00000485397 STARD3NLO95772 234 aa25.85■■□□□ 1.73
COL27A1-205ENST00000485397 HSPA6P17066 643 aa25.85■■□□□ 1.73
COL27A1-205ENST00000485397 ZNF790Q6PG37 636 aa25.85■■□□□ 1.73
COL27A1-205ENST00000485397 ARFGEF1Q9Y6D6 1849 aa25.84■■□□□ 1.73
COL27A1-205ENST00000485397 SERPINB2P05120 415 aa25.83■■□□□ 1.73
COL27A1-205ENST00000485397 PRKAR2BP31323 418 aa25.83■■□□□ 1.73
COL27A1-205ENST00000485397 EIF5P55010 431 aaKnown RBP25.83■■□□□ 1.73
COL27A1-205ENST00000485397 CFAP53Q96M91 514 aa25.83■■□□□ 1.73
COL27A1-205ENST00000485397 HEG1Q9ULI3 1381 aa25.82■■□□□ 1.72
COL27A1-205ENST00000485397 RSPH6AQ9H0K4 717 aa25.82■■□□□ 1.72
COL27A1-205ENST00000485397 NMRK2Q9NPI5 230 aa25.81■■□□□ 1.72
COL27A1-205ENST00000485397 AFDNP55196 1824 aaKnown RBP25.8■■□□□ 1.72
COL27A1-205ENST00000485397 KCNQ3O43525 872 aa25.8■■□□□ 1.72
COL27A1-205ENST00000485397 BICDL1Q6ZP65 573 aa25.8■■□□□ 1.72
COL27A1-205ENST00000485397 A0A087WZG4 1122 aa25.79■■□□□ 1.72
COL27A1-205ENST00000485397 TEX13AQ9BXU3 409 aaPredicted RBP25.79■■□□□ 1.72
COL27A1-205ENST00000485397 CEMIPQ8WUJ3 1361 aa25.79■■□□□ 1.72
COL27A1-205ENST00000485397 PPP2R1AP30153 589 aa25.78■■□□□ 1.72
COL27A1-205ENST00000485397 FMNL2Q96PY5 1086 aa25.78■■□□□ 1.72
COL27A1-205ENST00000485397 RNF181Q9P0P0 153 aa25.78■■□□□ 1.72
COL27A1-205ENST00000485397 NUDCQ9Y266 331 aa25.78■■□□□ 1.72
COL27A1-205ENST00000485397 ZNF330Q9Y3S2 320 aaPredicted RBP25.78■■□□□ 1.72
COL27A1-205ENST00000485397 NRXN2Q9P2S2 1712 aa25.77■■□□□ 1.72
COL27A1-205ENST00000485397 SIPA1L3O60292 1781 aaPredicted RBP25.77■■□□□ 1.72
COL27A1-205ENST00000485397 TBC1D2BQ9UPU7 963 aa25.77■■□□□ 1.72
COL27A1-205ENST00000485397 BTBD11A6QL63 1104 aa25.76■■□□□ 1.71
COL27A1-205ENST00000485397 TOMM70O94826 608 aa25.76■■□□□ 1.71
COL27A1-205ENST00000485397 A1BGP04217 495 aa25.76■■□□□ 1.71
COL27A1-205ENST00000485397 U2AF1L5P0DN76 240 aaPredicted RBP25.76■■□□□ 1.71
COL27A1-205ENST00000485397 U2AF1Q01081 240 aaKnown RBP eCLIP25.76■■□□□ 1.71
COL27A1-205ENST00000485397 TBC1D9BQ66K14 1250 aa25.76■■□□□ 1.71
COL27A1-205ENST00000485397 CARMIL3Q8ND23 1372 aa25.76■■□□□ 1.71
COL27A1-205ENST00000485397 C2CD5Q86YS7 1000 aa25.75■■□□□ 1.71
COL27A1-205ENST00000485397 IL6STP40189 918 aaPredicted RBP25.74■■□□□ 1.71
COL27A1-205ENST00000485397 RASSF7Q02833 373 aa25.73■■□□□ 1.71
COL27A1-205ENST00000485397 MCM10Q7L590 875 aa25.72■■□□□ 1.71
COL27A1-205ENST00000485397 TTLL6Q8N841 843 aa25.72■■□□□ 1.71
COL27A1-205ENST00000485397 H0YIN7 160 aa25.71■■□□□ 1.71
COL27A1-205ENST00000485397 CCDC24Q8N4L8 307 aa25.71■■□□□ 1.71
COL27A1-205ENST00000485397 USP16Q9Y5T5 823 aa25.71■■□□□ 1.71
COL27A1-205ENST00000485397 PRAMEF22A3QJZ6 481 aa25.7■■□□□ 1.7
COL27A1-205ENST00000485397 RTF1Q92541 710 aaKnown RBP25.7■■□□□ 1.7
COL27A1-205ENST00000485397 CEP350Q5VT06 3117 aa25.69■■□□□ 1.7
COL27A1-205ENST00000485397 CAMTA2O94983 1202 aa25.69■■□□□ 1.7
COL27A1-205ENST00000485397 PIP4K2AP48426 406 aaPredicted RBP25.69■■□□□ 1.7
COL27A1-205ENST00000485397 PRELPP51888 382 aa25.69■■□□□ 1.7
COL27A1-205ENST00000485397 DCTN1Q14203 1278 aa25.69■■□□□ 1.7
COL27A1-205ENST00000485397 SBF1O95248 1867 aa25.68■■□□□ 1.7
COL27A1-205ENST00000485397 KDM2BQ8NHM5 1336 aa25.68■■□□□ 1.7
COL27A1-205ENST00000485397 PRR5LQ6MZQ0 368 aa25.68■■□□□ 1.7
COL27A1-205ENST00000485397 NPM2Q86SE8 214 aaKnown RBP25.68■■□□□ 1.7
COL27A1-205ENST00000485397 RRAGCQ9HB90 399 aa25.67■■□□□ 1.7
COL27A1-205ENST00000485397 SCN7AQ01118 1682 aa25.67■■□□□ 1.7
COL27A1-205ENST00000485397 DLEC1Q9Y238 1755 aa25.67■■□□□ 1.7
COL27A1-205ENST00000485397 APLP1P51693 650 aa25.66■■□□□ 1.7
COL27A1-205ENST00000485397 C16orf71Q8IYS4 520 aaPredicted RBP25.66■■□□□ 1.7
COL27A1-205ENST00000485397 RBM46Q8TBY0 533 aaKnown RBP25.66■■□□□ 1.7
COL27A1-205ENST00000485397 ZNF622Q969S3 477 aaKnown RBP eCLIP25.66■■□□□ 1.7
COL27A1-205ENST00000485397 BRIP1Q9BX63 1249 aa25.66■■□□□ 1.7
COL27A1-205ENST00000485397 LMNB1P20700 586 aa25.65■■□□□ 1.7
COL27A1-205ENST00000485397 DZIP3Q86Y13 1208 aaKnown RBP25.65■■□□□ 1.7
COL27A1-205ENST00000485397 SNRPA1P09661 255 aaKnown RBP25.64■■□□□ 1.7
COL27A1-205ENST00000485397 PDE6BP35913 854 aa25.64■■□□□ 1.7
COL27A1-205ENST00000485397 SETDB2Q96T68 719 aa25.64■■□□□ 1.7
COL27A1-205ENST00000485397 ANKRD31Q8N7Z5 1873 aa25.64■■□□□ 1.69
COL27A1-205ENST00000485397 NFKBIEO00221 500 aa25.63■■□□□ 1.69
COL27A1-205ENST00000485397 ZNF219Q9P2Y4 722 aaPredicted RBP25.63■■□□□ 1.69
COL27A1-205ENST00000485397 HTATSF1O43719 755 aaKnown RBP25.62■■□□□ 1.69
COL27A1-205ENST00000485397 CNBD1Q8NA66 436 aa25.61■■□□□ 1.69
COL27A1-205ENST00000485397 PDZRN3Q9UPQ7 1066 aa25.61■■□□□ 1.69
COL27A1-205ENST00000485397 NPHP1O15259 732 aa25.6■■□□□ 1.69
COL27A1-205ENST00000485397 C21orf2O43822 256 aa25.6■■□□□ 1.69
COL27A1-205ENST00000485397 MIS18AQ9NYP9 233 aa25.6■■□□□ 1.69
COL27A1-205ENST00000485397 ZC3H4Q9UPT8 1303 aaKnown RBP25.6■■□□□ 1.69
COL27A1-205ENST00000485397 NBPF26B4DH59 902 aa25.59■■□□□ 1.69
COL27A1-205ENST00000485397 TAF7Q15545 349 aaPredicted RBP25.59■■□□□ 1.69
COL27A1-205ENST00000485397 NBPF10Q6P3W6 841 aaKnown RBP25.59■■□□□ 1.69
COL27A1-205ENST00000485397 NBPF15Q8N660 670 aa25.59■■□□□ 1.69
COL27A1-205ENST00000485397 DNAJC5GQ8N7S2 189 aa25.59■■□□□ 1.69
COL27A1-205ENST00000485397 ST5P78524 1137 aa25.58■■□□□ 1.69
COL27A1-205ENST00000485397 COL11A2P13942 1736 aaPredicted RBP25.57■■□□□ 1.68
COL27A1-205ENST00000485397 BCORQ6W2J9 1755 aa25.57■■□□□ 1.68
COL27A1-205ENST00000485397 GLTPD2A6NH11 291 aa25.57■■□□□ 1.68
COL27A1-205ENST00000485397 FSTL1Q12841 308 aa25.57■■□□□ 1.68
COL27A1-205ENST00000485397 HTRA3P83110 453 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms