RNA–Protein interactions for RNA: ENST00000485149.1

SORT1-206, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 442 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-206ENST00000485149 MFSD10Q14728 455 aa8.82□□□□□ -1
SORT1-206ENST00000485149 ARHGEF25Q86VW2 580 aa8.82□□□□□ -1
SORT1-206ENST00000485149 KCNH5Q8NCM2 988 aa8.82□□□□□ -1
SORT1-206ENST00000485149 SIN3AQ96ST3 1273 aa8.82□□□□□ -1
SORT1-206ENST00000485149 PIK3C2AO00443 1686 aa8.81□□□□□ -1
SORT1-206ENST00000485149 RGPD5Q99666 1765 aa8.81□□□□□ -1
SORT1-206ENST00000485149 BRD2P25440 801 aaKnown RBP8.81□□□□□ -1
SORT1-206ENST00000485149 DHX37Q8IY37 1157 aaKnown RBP8.81□□□□□ -1
SORT1-206ENST00000485149 STAC3Q96MF2 364 aa8.81□□□□□ -1
SORT1-206ENST00000485149 PCGF6Q9BYE7 350 aa8.81□□□□□ -1
SORT1-206ENST00000485149 POTEMA6NI47 508 aa8.8□□□□□ -1
SORT1-206ENST00000485149 IL2RBP14784 551 aa8.8□□□□□ -1
SORT1-206ENST00000485149 SRPK2P78362 688 aaKnown RBP8.8□□□□□ -1
SORT1-206ENST00000485149 NEUROD1Q13562 356 aa8.8□□□□□ -1
SORT1-206ENST00000485149 DSG2Q14126 1118 aa8.8□□□□□ -1
SORT1-206ENST00000485149 PLPP6Q8IY26 295 aa8.8□□□□□ -1
SORT1-206ENST00000485149 LY75O60449 1722 aa8.8□□□□□ -1
SORT1-206ENST00000485149 CICQ96RK0 1608 aaPredicted RBP8.8□□□□□ -1
SORT1-206ENST00000485149 QRICH2Q9H0J4 1663 aa8.79□□□□□ -1
SORT1-206ENST00000485149 PPP1R15BQ5SWA1 713 aa8.79□□□□□ -1
SORT1-206ENST00000485149 POTEGQ6S5H5 508 aa8.79□□□□□ -1
SORT1-206ENST00000485149 COL23A1Q86Y22 540 aaPredicted RBP8.79□□□□□ -1
SORT1-206ENST00000485149 DCAF11Q8TEB1 546 aa8.79□□□□□ -1
SORT1-206ENST00000485149 DDX27Q96GQ7 796 aaKnown RBP8.79□□□□□ -1
SORT1-206ENST00000485149 IGSF1Q8N6C5 1336 aa8.79□□□□□ -1
SORT1-206ENST00000485149 MSL1Q68DK7 614 aa8.78□□□□□ -1
SORT1-206ENST00000485149 GPR153Q6NV75 609 aa8.78□□□□□ -1
SORT1-206ENST00000485149 RBM46Q8TBY0 533 aaKnown RBP8.78□□□□□ -1
SORT1-206ENST00000485149 PTCD2Q8WV60 388 aaKnown RBP8.78□□□□□ -1
SORT1-206ENST00000485149 KDM4CQ9H3R0 1056 aa8.78□□□□□ -1
SORT1-206ENST00000485149 NFAT5O94916 1531 aa8.77□□□□□ -1.01
SORT1-206ENST00000485149 KCNQ4P56696 695 aa8.77□□□□□ -1.01
SORT1-206ENST00000485149 LARP6Q9BRS8 491 aaKnown RBP8.77□□□□□ -1.01
SORT1-206ENST00000485149 NLRP2Q9NX02 1062 aa8.77□□□□□ -1.01
SORT1-206ENST00000485149 CCNL1Q9UK58 526 aaPredicted RBP8.77□□□□□ -1.01
SORT1-206ENST00000485149 ERBB3P21860 1342 aa8.77□□□□□ -1.01
SORT1-206ENST00000485149 ANKRD36BQ8N2N9 1353 aa8.76□□□□□ -1.01
SORT1-206ENST00000485149 TRAK2O60296 914 aa8.76□□□□□ -1.01
SORT1-206ENST00000485149 HMGB2P26583 209 aaKnown RBP8.76□□□□□ -1.01
SORT1-206ENST00000485149 HTRA3P83110 453 aa8.76□□□□□ -1.01
SORT1-206ENST00000485149 FSTL1Q12841 308 aa8.76□□□□□ -1.01
SORT1-206ENST00000485149 FLIIQ13045 1269 aa8.76□□□□□ -1.01
SORT1-206ENST00000485149 C16orf71Q8IYS4 520 aaPredicted RBP8.76□□□□□ -1.01
SORT1-206ENST00000485149 FLAD1Q8NFF5 587 aa8.76□□□□□ -1.01
SORT1-206ENST00000485149 POLR3GLQ9BT43 218 aa8.76□□□□□ -1.01
SORT1-206ENST00000485149 CABP1Q9NZU7 370 aa8.76□□□□□ -1.01
SORT1-206ENST00000485149 TBC1D12O60347 775 aa8.75□□□□□ -1.01
SORT1-206ENST00000485149 EMP3P54852 163 aa8.75□□□□□ -1.01
SORT1-206ENST00000485149 FAM161AQ3B820 660 aa8.75□□□□□ -1.01
SORT1-206ENST00000485149 UBE2Q2Q8WVN8 375 aa8.75□□□□□ -1.01
SORT1-206ENST00000485149 SYTL4Q96C24 671 aaPredicted RBP8.75□□□□□ -1.01
SORT1-206ENST00000485149 NMRK2Q9NPI5 230 aa8.75□□□□□ -1.01
SORT1-206ENST00000485149 DOT1LQ8TEK3 1739 aa8.74□□□□□ -1.01
SORT1-206ENST00000485149 TESPA1A2RU30 521 aaPredicted RBP8.74□□□□□ -1.01
SORT1-206ENST00000485149 PRIM1P49642 420 aaKnown RBP8.74□□□□□ -1.01
SORT1-206ENST00000485149 DDX54Q8TDD1 881 aaKnown RBP8.74□□□□□ -1.01
SORT1-206ENST00000485149 AK7Q96M32 723 aa8.74□□□□□ -1.01
SORT1-206ENST00000485149 PCDHGA4Q9Y5G9 962 aa8.74□□□□□ -1.01
SORT1-206ENST00000485149 PCNTO95613 3336 aa8.74□□□□□ -1.01
SORT1-206ENST00000485149 TTC21BQ7Z4L5 1316 aa8.74□□□□□ -1.01
SORT1-206ENST00000485149 TTC21AQ8NDW8 1320 aa8.74□□□□□ -1.01
SORT1-206ENST00000485149 NSD2O96028 1365 aa8.73□□□□□ -1.01
SORT1-206ENST00000485149 USP47Q96K76 1375 aa8.73□□□□□ -1.01
SORT1-206ENST00000485149 C5P01031 1676 aa8.73□□□□□ -1.01
SORT1-206ENST00000485149 SEMA3EO15041 775 aa8.73□□□□□ -1.01
SORT1-206ENST00000485149 HSPA1AP0DMV8 641 aaKnown RBP8.73□□□□□ -1.01
SORT1-206ENST00000485149 HSPA1BP0DMV9 641 aaKnown RBP8.73□□□□□ -1.01
SORT1-206ENST00000485149 L3MBTL2Q969R5 705 aa8.73□□□□□ -1.01
SORT1-206ENST00000485149 KAT6BQ8WYB5 2073 aa8.73□□□□□ -1.01
SORT1-206ENST00000485149 USP54Q70EL1 1684 aa8.72□□□□□ -1.01
SORT1-206ENST00000485149 KIAA1210Q9ULL0 1709 aa8.72□□□□□ -1.01
SORT1-206ENST00000485149 A6NJR5 290 aa8.72□□□□□ -1.01
SORT1-206ENST00000485149 FAM177A1Q8N128 213 aaPredicted RBP8.72□□□□□ -1.01
SORT1-206ENST00000485149 OXER1Q8TDS5 423 aa8.72□□□□□ -1.01
SORT1-206ENST00000485149 CLUAP1Q96AJ1 413 aa8.72□□□□□ -1.01
SORT1-206ENST00000485149 CENPJQ9HC77 1338 aaPredicted RBP8.72□□□□□ -1.01
SORT1-206ENST00000485149 PLEKHG2Q9H7P9 1386 aa8.72□□□□□ -1.01
SORT1-206ENST00000485149 C10orf71Q711Q0 1435 aa8.71□□□□□ -1.01
SORT1-206ENST00000485149 CAMK2BQ13554 666 aa8.71□□□□□ -1.02
SORT1-206ENST00000485149 NBPF1Q3BBV0 1214 aa8.71□□□□□ -1.02
SORT1-206ENST00000485149 ARSIQ5FYB1 569 aa8.71□□□□□ -1.02
SORT1-206ENST00000485149 ANKRD24Q8TF21 1146 aa8.71□□□□□ -1.02
SORT1-206ENST00000485149 FAM208AQ9UK61 1670 aaKnown RBP8.7□□□□□ -1.02
SORT1-206ENST00000485149 MARVELD3Q96A59 401 aa8.7□□□□□ -1.02
SORT1-206ENST00000485149 KDM2BQ8NHM5 1336 aa8.7□□□□□ -1.02
SORT1-206ENST00000485149 LTN1O94822 1766 aa8.7□□□□□ -1.02
SORT1-206ENST00000485149 NSD3Q9BZ95 1437 aa8.7□□□□□ -1.02
SORT1-206ENST00000485149 SMC1BQ8NDV3 1235 aa8.69□□□□□ -1.02
SORT1-206ENST00000485149 ARHGEF1Q92888 912 aaKnown RBP8.69□□□□□ -1.02
SORT1-206ENST00000485149 PXDNLA1KZ92 1463 aa8.69□□□□□ -1.02
SORT1-206ENST00000485149 TNRC6CQ9HCJ0 1690 aaKnown RBP8.69□□□□□ -1.02
SORT1-206ENST00000485149 ARHGAP27Q6ZUM4 889 aa8.68□□□□□ -1.02
SORT1-206ENST00000485149 RETREG2Q8NC44 543 aa8.68□□□□□ -1.02
SORT1-206ENST00000485149 FBXW7Q969H0 707 aa8.68□□□□□ -1.02
SORT1-206ENST00000485149 BCS1LQ9Y276 419 aa8.68□□□□□ -1.02
SORT1-206ENST00000485149 USP31Q70CQ4 1352 aa8.68□□□□□ -1.02
SORT1-206ENST00000485149 KCPQ6ZWJ8 1503 aa8.68□□□□□ -1.02
SORT1-206ENST00000485149 C4BP0C0L5 1744 aa8.68□□□□□ -1.02
SORT1-206ENST00000485149 TOGARAM1Q9Y4F4 1720 aa8.68□□□□□ -1.02
SORT1-206ENST00000485149 TAF1LQ8IZX4 1826 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms