RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 ABTB2Q8N961 1025 aa11.3□□□□□ -0.6
USP16-206ENST00000485067 PTPRCP08575 1304 aa11.3□□□□□ -0.6
USP16-206ENST00000485067 KDRP35968 1356 aa11.3□□□□□ -0.6
USP16-206ENST00000485067 LOC102724159A0A0B4J2E5 919 aa11.29□□□□□ -0.6
USP16-206ENST00000485067 PWP2Q15269 919 aaKnown RBP11.29□□□□□ -0.6
USP16-206ENST00000485067 MTHFSDQ2M296 383 aaKnown RBP11.29□□□□□ -0.6
USP16-206ENST00000485067 RINLQ6ZS11 566 aa11.29□□□□□ -0.6
USP16-206ENST00000485067 OTUD6BQ8N6M0 293 aa11.29□□□□□ -0.6
USP16-206ENST00000485067 CRB1P82279 1406 aa11.29□□□□□ -0.6
USP16-206ENST00000485067 CLCN1P35523 988 aa11.29□□□□□ -0.6
USP16-206ENST00000485067 USHBP1Q8N6Y0 703 aa11.29□□□□□ -0.6
USP16-206ENST00000485067 ORAI2Q96SN7 254 aa11.29□□□□□ -0.6
USP16-206ENST00000485067 LNPKQ9C0E8 428 aa11.29□□□□□ -0.6
USP16-206ENST00000485067 PHF8Q9UPP1 1060 aa11.29□□□□□ -0.6
USP16-206ENST00000485067 HTATSF1O43719 755 aaKnown RBP11.28□□□□□ -0.6
USP16-206ENST00000485067 FOXD4L6Q3SYB3 417 aaPredicted RBP11.28□□□□□ -0.6
USP16-206ENST00000485067 ESCO1Q5FWF5 840 aa11.28□□□□□ -0.6
USP16-206ENST00000485067 FOXD4L3Q6VB84 417 aaPredicted RBP11.28□□□□□ -0.6
USP16-206ENST00000485067 CCDC82Q8N4S0 544 aa11.28□□□□□ -0.6
USP16-206ENST00000485067 ANKRD45Q5TZF3 282 aa11.28□□□□□ -0.6
USP16-206ENST00000485067 TBC1D2Q9BYX2 928 aa11.28□□□□□ -0.6
USP16-206ENST00000485067 IGSF1Q8N6C5 1336 aa11.27□□□□□ -0.61
USP16-206ENST00000485067 HOXC9P31274 260 aa11.27□□□□□ -0.61
USP16-206ENST00000485067 MFAP1P55081 439 aaKnown RBP11.27□□□□□ -0.61
USP16-206ENST00000485067 GAS2L2Q8NHY3 880 aa11.27□□□□□ -0.61
USP16-206ENST00000485067 RTF1Q92541 710 aaKnown RBP11.27□□□□□ -0.61
USP16-206ENST00000485067 NPHP4O75161 1426 aaPredicted RBP11.27□□□□□ -0.61
USP16-206ENST00000485067 CACNA1FO60840 1977 aa11.27□□□□□ -0.61
USP16-206ENST00000485067 CCDC96Q2M329 555 aa11.26□□□□□ -0.61
USP16-206ENST00000485067 ANTXR1Q9H6X2 564 aa11.26□□□□□ -0.61
USP16-206ENST00000485067 NWD1Q149M9 1564 aa11.26□□□□□ -0.61
USP16-206ENST00000485067 SIRT2Q8IXJ6 389 aa11.26□□□□□ -0.61
USP16-206ENST00000485067 RPAP2Q8IXW5 612 aaPredicted RBP11.26□□□□□ -0.61
USP16-206ENST00000485067 LRRC37A3O60309 1634 aa11.26□□□□□ -0.61
USP16-206ENST00000485067 FRAT2O75474 233 aaPredicted RBP11.25□□□□□ -0.61
USP16-206ENST00000485067 RGS12O14924 1447 aa11.25□□□□□ -0.61
USP16-206ENST00000485067 SOS1Q07889 1333 aaPredicted RBP11.25□□□□□ -0.61
USP16-206ENST00000485067 ZNF500O60304 480 aaPredicted RBP11.25□□□□□ -0.61
USP16-206ENST00000485067 DCTPP1Q9H773 170 aa11.25□□□□□ -0.61
USP16-206ENST00000485067 ADGRL3Q9HAR2 1447 aa11.25□□□□□ -0.61
USP16-206ENST00000485067 LETM1O95202 739 aaPredicted RBP11.24□□□□□ -0.61
USP16-206ENST00000485067 SPTY2D1Q68D10 685 aaPredicted RBP11.24□□□□□ -0.61
USP16-206ENST00000485067 ANKRD44Q8N8A2 993 aa11.24□□□□□ -0.61
USP16-206ENST00000485067 ARID4AP29374 1257 aaPredicted RBP11.24□□□□□ -0.61
USP16-206ENST00000485067 BABAM1Q9NWV8 329 aa11.24□□□□□ -0.61
USP16-206ENST00000485067 LTN1O94822 1766 aa11.24□□□□□ -0.61
USP16-206ENST00000485067 RTL1A6NKG5 1358 aa11.24□□□□□ -0.61
USP16-206ENST00000485067 MAP2K1Q02750 393 aaPredicted RBP11.23□□□□□ -0.61
USP16-206ENST00000485067 HSCBQ8IWL3 235 aa11.23□□□□□ -0.61
USP16-206ENST00000485067 DDX17Q92841 729 aaKnown RBP11.23□□□□□ -0.61
USP16-206ENST00000485067 SNX21Q969T3 373 aa11.23□□□□□ -0.61
USP16-206ENST00000485067 TSPYL4Q9UJ04 414 aa11.23□□□□□ -0.61
USP16-206ENST00000485067 PSME1Q06323 249 aa11.23□□□□□ -0.61
USP16-206ENST00000485067 SLKQ9H2G2 1235 aaPredicted RBP11.23□□□□□ -0.61
USP16-206ENST00000485067 RGPD2P0DJD1 1756 aa11.22□□□□□ -0.61
USP16-206ENST00000485067 ATP10DQ9P241 1426 aa11.22□□□□□ -0.61
USP16-206ENST00000485067 CADPS2Q86UW7 1296 aa11.22□□□□□ -0.61
USP16-206ENST00000485067 BANK1Q8NDB2 785 aa11.22□□□□□ -0.61
USP16-206ENST00000485067 LRRC59Q96AG4 307 aaKnown RBP11.22□□□□□ -0.61
USP16-206ENST00000485067 CCT4P50991 539 aaKnown RBP11.21□□□□□ -0.61
USP16-206ENST00000485067 NBPF10Q6P3W6 841 aaKnown RBP11.21□□□□□ -0.61
USP16-206ENST00000485067 GTPBP4Q9BZE4 634 aaKnown RBP11.21□□□□□ -0.61
USP16-206ENST00000485067 RAI14Q9P0K7 980 aa11.21□□□□□ -0.61
USP16-206ENST00000485067 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.61
USP16-206ENST00000485067 GOLGA6L3A6NEY3 463 aa11.21□□□□□ -0.62
USP16-206ENST00000485067 GNAT3A8MTJ3 354 aa11.21□□□□□ -0.62
USP16-206ENST00000485067 GOLIM4O00461 696 aa11.21□□□□□ -0.62
USP16-206ENST00000485067 CDC45O75419 566 aa11.21□□□□□ -0.62
USP16-206ENST00000485067 NBPF6Q5VWK0 638 aa11.21□□□□□ -0.62
USP16-206ENST00000485067 G2E3Q7L622 706 aa11.21□□□□□ -0.62
USP16-206ENST00000485067 NBPF4Q96M43 638 aa11.21□□□□□ -0.62
USP16-206ENST00000485067 CHMP5Q9NZZ3 219 aa11.21□□□□□ -0.62
USP16-206ENST00000485067 NFAT5O94916 1531 aa11.21□□□□□ -0.62
USP16-206ENST00000485067 MSH6P52701 1360 aa11.2□□□□□ -0.62
USP16-206ENST00000485067 HMMRO75330 724 aa11.2□□□□□ -0.62
USP16-206ENST00000485067 HSPA2P54652 639 aa11.2□□□□□ -0.62
USP16-206ENST00000485067 CEP85Q6P2H3 762 aa11.2□□□□□ -0.62
USP16-206ENST00000485067 PROSER2Q86WR7 435 aaPredicted RBP11.2□□□□□ -0.62
USP16-206ENST00000485067 NBPF5PQ86XG9 351 aaPredicted RBP11.2□□□□□ -0.62
USP16-206ENST00000485067 RIPOR2Q9Y4F9 1068 aa11.2□□□□□ -0.62
USP16-206ENST00000485067 FAM208AQ9UK61 1670 aaKnown RBP11.2□□□□□ -0.62
USP16-206ENST00000485067 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
USP16-206ENST00000485067 SATB1Q01826 763 aa11.2□□□□□ -0.62
USP16-206ENST00000485067 TBC1D9Q6ZT07 1266 aa11.2□□□□□ -0.62
USP16-206ENST00000485067 IL17REQ8NFR9 667 aa11.2□□□□□ -0.62
USP16-206ENST00000485067 STK31Q9BXU1 1019 aa11.2□□□□□ -0.62
USP16-206ENST00000485067 NCOA3Q9Y6Q9 1424 aa11.2□□□□□ -0.62
USP16-206ENST00000485067 PHRF1Q9P1Y6 1649 aaKnown RBP11.2□□□□□ -0.62
USP16-206ENST00000485067 MAP3K5Q99683 1374 aa11.19□□□□□ -0.62
USP16-206ENST00000485067 ARMCX6Q7L4S7 300 aa11.19□□□□□ -0.62
USP16-206ENST00000485067 PLEKHM2Q8IWE5 1019 aa11.19□□□□□ -0.62
USP16-206ENST00000485067 STRCP1A6NGW2 1772 aa11.19□□□□□ -0.62
USP16-206ENST00000485067 SSR1P43307 286 aaKnown RBP11.19□□□□□ -0.62
USP16-206ENST00000485067 CCDC30Q5VVM6 783 aa11.19□□□□□ -0.62
USP16-206ENST00000485067 MTERF4Q7Z6M4 381 aaKnown RBP11.19□□□□□ -0.62
USP16-206ENST00000485067 F6X3S4 739 aa11.18□□□□□ -0.62
USP16-206ENST00000485067 TTC22Q5TAA0 569 aa11.18□□□□□ -0.62
USP16-206ENST00000485067 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.18□□□□□ -0.62
USP16-206ENST00000485067 PXDNLA1KZ92 1463 aa11.17□□□□□ -0.62
USP16-206ENST00000485067 IP6K1Q92551 441 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms