RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 BTAF1O14981 1849 aa26.08■■□□□ 1.77
VCPKMT-203ENST00000484763 API5Q9BZZ5 524 aaKnown RBP26.08■■□□□ 1.77
VCPKMT-203ENST00000484763 TNNQ9UQP3 1299 aa26.08■■□□□ 1.77
VCPKMT-203ENST00000484763 PANK1Q8TE04 598 aa26.07■■□□□ 1.76
VCPKMT-203ENST00000484763 CLUAP1Q96AJ1 413 aa26.07■■□□□ 1.76
VCPKMT-203ENST00000484763 CRBNQ96SW2 442 aa26.07■■□□□ 1.76
VCPKMT-203ENST00000484763 RBM42Q9BTD8 480 aaKnown RBP26.07■■□□□ 1.76
VCPKMT-203ENST00000484763 USP16Q9Y5T5 823 aa26.07■■□□□ 1.76
VCPKMT-203ENST00000484763 RGS12O14924 1447 aa26.06■■□□□ 1.76
VCPKMT-203ENST00000484763 RLBP1P12271 317 aa26.06■■□□□ 1.76
VCPKMT-203ENST00000484763 POTEAQ6S8J7 498 aa26.06■■□□□ 1.76
VCPKMT-203ENST00000484763 G2E3Q7L622 706 aa26.06■■□□□ 1.76
VCPKMT-203ENST00000484763 SMARCC1Q92922 1105 aaPredicted RBP26.06■■□□□ 1.76
VCPKMT-203ENST00000484763 CICQ96RK0 1608 aaPredicted RBP26.05■■□□□ 1.76
VCPKMT-203ENST00000484763 FLIIQ13045 1269 aa26.05■■□□□ 1.76
VCPKMT-203ENST00000484763 EXOC6Q8TAG9 804 aa26.05■■□□□ 1.76
VCPKMT-203ENST00000484763 TJP1Q07157 1748 aa26.05■■□□□ 1.76
VCPKMT-203ENST00000484763 TEX13AQ9BXU3 409 aaPredicted RBP26.04■■□□□ 1.76
VCPKMT-203ENST00000484763 PALLDQ8WX93 1383 aa26.04■■□□□ 1.76
VCPKMT-203ENST00000484763 FAM196AQ6ZSG2 479 aa26.04■■□□□ 1.76
VCPKMT-203ENST00000484763 DDX21Q9NR30 783 aaKnown RBP eCLIP26.04■■□□□ 1.76
VCPKMT-203ENST00000484763 ERBB4Q15303 1308 aa26.04■■□□□ 1.76
VCPKMT-203ENST00000484763 ABCC4O15439 1325 aa26.03■■□□□ 1.76
VCPKMT-203ENST00000484763 ZNF831Q5JPB2 1677 aa26.03■■□□□ 1.76
VCPKMT-203ENST00000484763 HYPKQ9NX55 129 aa26.02■■□□□ 1.76
VCPKMT-203ENST00000484763 COG6Q9Y2V7 657 aa26.02■■□□□ 1.76
VCPKMT-203ENST00000484763 ANXA1P04083 346 aa26.01■■□□□ 1.75
VCPKMT-203ENST00000484763 FKBP5Q13451 457 aaPredicted RBP26.01■■□□□ 1.75
VCPKMT-203ENST00000484763 PDIA6Q15084 440 aa26.01■■□□□ 1.75
VCPKMT-203ENST00000484763 PROSER3Q2NL68 480 aa26.01■■□□□ 1.75
VCPKMT-203ENST00000484763 PHAXQ9H814 394 aaKnown RBP26.01■■□□□ 1.75
VCPKMT-203ENST00000484763 SLC4A9Q96Q91 983 aa26■■□□□ 1.75
VCPKMT-203ENST00000484763 MVPQ14764 893 aaKnown RBP26■■□□□ 1.75
VCPKMT-203ENST00000484763 DNAJC10Q8IXB1 793 aa26■■□□□ 1.75
VCPKMT-203ENST00000484763 PTF1AQ7RTS3 328 aa25.99■■□□□ 1.75
VCPKMT-203ENST00000484763 ILDR1Q86SU0 546 aaPredicted RBP25.99■■□□□ 1.75
VCPKMT-203ENST00000484763 TMEM57Q8N5G2 664 aa25.99■■□□□ 1.75
VCPKMT-203ENST00000484763 LOC102724428A0A0B4J2F2 783 aa25.98■■□□□ 1.75
VCPKMT-203ENST00000484763 STARD3NLO95772 234 aa25.98■■□□□ 1.75
VCPKMT-203ENST00000484763 SIK1P57059 783 aa25.98■■□□□ 1.75
VCPKMT-203ENST00000484763 N4BP2Q86UW6 1770 aaPredicted RBP25.98■■□□□ 1.75
VCPKMT-203ENST00000484763 BCL11BQ9C0K0 894 aaPredicted RBP25.98■■□□□ 1.75
VCPKMT-203ENST00000484763 MYL6BP14649 208 aa25.97■■□□□ 1.75
VCPKMT-203ENST00000484763 ITPRIPQ8IWB1 547 aa25.97■■□□□ 1.75
VCPKMT-203ENST00000484763 PXDNLA1KZ92 1463 aa25.97■■□□□ 1.75
VCPKMT-203ENST00000484763 LY75O60449 1722 aa25.96■■□□□ 1.75
VCPKMT-203ENST00000484763 ATP6V1AP38606 617 aa25.95■■□□□ 1.75
VCPKMT-203ENST00000484763 PPP4R2Q9NY27 417 aa25.95■■□□□ 1.75
VCPKMT-203ENST00000484763 COL5A3P25940 1745 aaPredicted RBP25.95■■□□□ 1.74
VCPKMT-203ENST00000484763 LRP10Q7Z4F1 713 aa25.95■■□□□ 1.74
VCPKMT-203ENST00000484763 DDX19BQ9UMR2 479 aa25.95■■□□□ 1.74
VCPKMT-203ENST00000484763 A1BGP04217 495 aa25.94■■□□□ 1.74
VCPKMT-203ENST00000484763 NBPF26B4DH59 902 aa25.93■■□□□ 1.74
VCPKMT-203ENST00000484763 CYP19A1P11511 503 aaPredicted RBP25.93■■□□□ 1.74
VCPKMT-203ENST00000484763 PIP4K2AP48426 406 aaPredicted RBP25.93■■□□□ 1.74
VCPKMT-203ENST00000484763 NBPF14Q5TI25 921 aa25.93■■□□□ 1.74
VCPKMT-203ENST00000484763 NBPF10Q6P3W6 841 aaKnown RBP25.93■■□□□ 1.74
VCPKMT-203ENST00000484763 NBPF15Q8N660 670 aa25.93■■□□□ 1.74
VCPKMT-203ENST00000484763 EP400Q96L91 3159 aa25.93■■□□□ 1.74
VCPKMT-203ENST00000484763 F6X3S4 739 aa25.93■■□□□ 1.74
VCPKMT-203ENST00000484763 DDX58O95786 925 aaKnown RBP25.93■■□□□ 1.74
VCPKMT-203ENST00000484763 INTS3Q68E01 1043 aaKnown RBP25.93■■□□□ 1.74
VCPKMT-203ENST00000484763 RREB1Q92766 1687 aa25.91■■□□□ 1.74
VCPKMT-203ENST00000484763 AAMPQ13685 434 aa25.91■■□□□ 1.74
VCPKMT-203ENST00000484763 XAGE3Q8WTP9 111 aa25.91■■□□□ 1.74
VCPKMT-203ENST00000484763 ADCY9O60503 1353 aa25.91■■□□□ 1.74
VCPKMT-203ENST00000484763 SLC4A10Q6U841 1118 aa25.91■■□□□ 1.74
VCPKMT-203ENST00000484763 PI4KAP2A4QPH2 592 aa25.9■■□□□ 1.74
VCPKMT-203ENST00000484763 CCT4P50991 539 aaKnown RBP25.9■■□□□ 1.74
VCPKMT-203ENST00000484763 AIMP1Q12904 312 aaKnown RBP25.9■■□□□ 1.74
VCPKMT-203ENST00000484763 COPS6Q7L5N1 327 aa25.9■■□□□ 1.74
VCPKMT-203ENST00000484763 PI4KAP1Q8N8J0 262 aa25.9■■□□□ 1.74
VCPKMT-203ENST00000484763 TRIM37O94972 964 aa25.89■■□□□ 1.74
VCPKMT-203ENST00000484763 ITPK1Q13572 414 aa25.89■■□□□ 1.74
VCPKMT-203ENST00000484763 KSR2Q6VAB6 950 aa25.89■■□□□ 1.74
VCPKMT-203ENST00000484763 DNAAF4Q8WXU2 420 aa25.88■■□□□ 1.73
VCPKMT-203ENST00000484763 CHMP4BQ9H444 224 aaKnown RBP25.88■■□□□ 1.73
VCPKMT-203ENST00000484763 ARFGEF2Q9Y6D5 1785 aa25.87■■□□□ 1.73
VCPKMT-203ENST00000484763 ATP10DQ9P241 1426 aa25.87■■□□□ 1.73
VCPKMT-203ENST00000484763 ZBTB1Q9Y2K1 713 aa25.86■■□□□ 1.73
VCPKMT-203ENST00000484763 MAP3K2Q9Y2U5 619 aa25.86■■□□□ 1.73
VCPKMT-203ENST00000484763 NUP188Q5SRE5 1749 aa25.86■■□□□ 1.73
VCPKMT-203ENST00000484763 TAF1LQ8IZX4 1826 aa25.86■■□□□ 1.73
VCPKMT-203ENST00000484763 CCDC87Q9NVE4 849 aa25.86■■□□□ 1.73
VCPKMT-203ENST00000484763 CRKLP46109 303 aaKnown RBP25.85■■□□□ 1.73
VCPKMT-203ENST00000484763 CCNL1Q9UK58 526 aaPredicted RBP25.85■■□□□ 1.73
VCPKMT-203ENST00000484763 MYH14Q7Z406 1995 aaKnown RBP25.85■■□□□ 1.73
VCPKMT-203ENST00000484763 ANKRD13DQ6ZTN6 518 aa25.84■■□□□ 1.73
VCPKMT-203ENST00000484763 RIC3Q7Z5B4 369 aa25.84■■□□□ 1.73
VCPKMT-203ENST00000484763 ZBTB7BO15156 539 aaPredicted RBP25.84■■□□□ 1.73
VCPKMT-203ENST00000484763 CCDC136Q96JN2 1154 aa25.84■■□□□ 1.73
VCPKMT-203ENST00000484763 TNS1Q9HBL0 1735 aaKnown RBP25.83■■□□□ 1.73
VCPKMT-203ENST00000484763 IL6STP40189 918 aaPredicted RBP25.83■■□□□ 1.73
VCPKMT-203ENST00000484763 LINC00116Q8NCU8 138 aa25.83■■□□□ 1.73
VCPKMT-203ENST00000484763 ZBTB40Q9NUA8 1239 aa25.83■■□□□ 1.73
VCPKMT-203ENST00000484763 ZNF330Q9Y3S2 320 aaPredicted RBP25.83■■□□□ 1.73
VCPKMT-203ENST00000484763 INTS5Q6P9B9 1019 aaKnown RBP25.82■■□□□ 1.72
VCPKMT-203ENST00000484763 PLBD2Q8NHP8 589 aa25.82■■□□□ 1.72
VCPKMT-203ENST00000484763 SRCIN1Q9C0H9 1055 aa25.82■■□□□ 1.72
VCPKMT-203ENST00000484763 BEND3Q5T5X7 828 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms