RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 TTC5Q8N0Z6 440 aa8.38□□□□□ -1.07
PDZRN3-209ENST00000484487 MARCH10Q8NA82 808 aaPredicted RBP8.38□□□□□ -1.07
PDZRN3-209ENST00000484487 TSR2Q969E8 191 aaKnown RBP8.38□□□□□ -1.07
PDZRN3-209ENST00000484487 FAM212AQ96EL1 285 aa8.38□□□□□ -1.07
PDZRN3-209ENST00000484487 RCAN3Q9UKA8 241 aa8.38□□□□□ -1.07
PDZRN3-209ENST00000484487 ZNF831Q5JPB2 1677 aa8.37□□□□□ -1.07
PDZRN3-209ENST00000484487 DCAF8Q5TAQ9 597 aa8.37□□□□□ -1.07
PDZRN3-209ENST00000484487 ZNF790Q6PG37 636 aa8.37□□□□□ -1.07
PDZRN3-209ENST00000484487 KIF12Q96FN5 646 aa8.37□□□□□ -1.07
PDZRN3-209ENST00000484487 HOXB7P09629 217 aa8.36□□□□□ -1.07
PDZRN3-209ENST00000484487 TWISTNBQ3B726 338 aaPredicted RBP8.36□□□□□ -1.07
PDZRN3-209ENST00000484487 ALDH1L2Q3SY69 923 aa8.36□□□□□ -1.07
PDZRN3-209ENST00000484487 FAM196AQ6ZSG2 479 aa8.36□□□□□ -1.07
PDZRN3-209ENST00000484487 KRT27Q7Z3Y8 459 aa8.36□□□□□ -1.07
PDZRN3-209ENST00000484487 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.36□□□□□ -1.07
PDZRN3-209ENST00000484487 MIS18AQ9NYP9 233 aa8.36□□□□□ -1.07
PDZRN3-209ENST00000484487 C5P01031 1676 aa8.36□□□□□ -1.07
PDZRN3-209ENST00000484487 MAP3K13O43283 966 aa8.35□□□□□ -1.07
PDZRN3-209ENST00000484487 VAMP4O75379 141 aa8.35□□□□□ -1.07
PDZRN3-209ENST00000484487 PRIM1P49642 420 aaKnown RBP8.35□□□□□ -1.07
PDZRN3-209ENST00000484487 EIF4A1P60842 406 aaKnown RBP8.35□□□□□ -1.07
PDZRN3-209ENST00000484487 SMARCC1Q92922 1105 aaPredicted RBP8.35□□□□□ -1.07
PDZRN3-209ENST00000484487 SYTL4Q96C24 671 aaPredicted RBP8.35□□□□□ -1.07
PDZRN3-209ENST00000484487 FMNL2Q96PY5 1086 aa8.35□□□□□ -1.07
PDZRN3-209ENST00000484487 RGS17Q9UGC6 210 aaPredicted RBP8.35□□□□□ -1.07
PDZRN3-209ENST00000484487 CICQ96RK0 1608 aaPredicted RBP8.35□□□□□ -1.07
PDZRN3-209ENST00000484487 LY75O60449 1722 aa8.34□□□□□ -1.07
PDZRN3-209ENST00000484487 HMGB2P26583 209 aaKnown RBP8.34□□□□□ -1.07
PDZRN3-209ENST00000484487 CCDC30Q5VVM6 783 aa8.34□□□□□ -1.07
PDZRN3-209ENST00000484487 C8orf58Q8NAV2 365 aa8.34□□□□□ -1.07
PDZRN3-209ENST00000484487 PIGBQ92521 554 aa8.34□□□□□ -1.07
PDZRN3-209ENST00000484487 TEX13AQ9BXU3 409 aaPredicted RBP8.34□□□□□ -1.07
PDZRN3-209ENST00000484487 HEG1Q9ULI3 1381 aa8.34□□□□□ -1.07
PDZRN3-209ENST00000484487 KCPQ6ZWJ8 1503 aa8.34□□□□□ -1.08
PDZRN3-209ENST00000484487 TAF1LQ8IZX4 1826 aa8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 ELL2O00472 640 aaPredicted RBP8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 GIGYF1O75420 1035 aaPredicted RBP8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 SNRPA1P09661 255 aaKnown RBP8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 MS4A1P11836 297 aa8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 RARSP54136 660 aaKnown RBP8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 SLC39A6Q13433 755 aa8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 POTEAQ6S8J7 498 aa8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 VSIG10Q8N0Z9 540 aa8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 ACSBG1Q96GR2 724 aa8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 STK31Q9BXU1 1019 aa8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 SMC4Q9NTJ3 1288 aa8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 RGPD3A6NKT7 1758 aaPredicted RBP8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 RGPD4Q7Z3J3 1758 aa8.33□□□□□ -1.08
PDZRN3-209ENST00000484487 COL5A3P25940 1745 aaPredicted RBP8.32□□□□□ -1.08
PDZRN3-209ENST00000484487 TJP1Q07157 1748 aa8.32□□□□□ -1.08
PDZRN3-209ENST00000484487 RGS12O14924 1447 aa8.32□□□□□ -1.08
PDZRN3-209ENST00000484487 IPO8O15397 1037 aaKnown RBP8.32□□□□□ -1.08
PDZRN3-209ENST00000484487 KCNQ3O43525 872 aa8.32□□□□□ -1.08
PDZRN3-209ENST00000484487 NEFLP07196 543 aa8.32□□□□□ -1.08
PDZRN3-209ENST00000484487 BRPF1P55201 1214 aaPredicted RBP8.32□□□□□ -1.08
PDZRN3-209ENST00000484487 TSPYL6Q8N831 410 aa8.32□□□□□ -1.08
PDZRN3-209ENST00000484487 ZNF496Q96IT1 587 aaPredicted RBP8.32□□□□□ -1.08
PDZRN3-209ENST00000484487 BCL11BQ9C0K0 894 aaPredicted RBP8.32□□□□□ -1.08
PDZRN3-209ENST00000484487 ATG3Q9NT62 314 aa8.32□□□□□ -1.08
PDZRN3-209ENST00000484487 SUPT16HQ9Y5B9 1047 aaKnown RBP8.32□□□□□ -1.08
PDZRN3-209ENST00000484487 ERBB4Q15303 1308 aa8.31□□□□□ -1.08
PDZRN3-209ENST00000484487 KIF16BQ96L93 1317 aa8.31□□□□□ -1.08
PDZRN3-209ENST00000484487 N4BP2Q86UW6 1770 aaPredicted RBP8.31□□□□□ -1.08
PDZRN3-209ENST00000484487 STARD3NLO95772 234 aa8.31□□□□□ -1.08
PDZRN3-209ENST00000484487 CANXP27824 592 aaKnown RBP8.31□□□□□ -1.08
PDZRN3-209ENST00000484487 HDGFL1Q5TGJ6 251 aa8.31□□□□□ -1.08
PDZRN3-209ENST00000484487 LHX8Q68G74 356 aa8.31□□□□□ -1.08
PDZRN3-209ENST00000484487 SSH1Q8WYL5 1049 aa8.31□□□□□ -1.08
PDZRN3-209ENST00000484487 DBF4Q9UBU7 674 aaPredicted RBP8.31□□□□□ -1.08
PDZRN3-209ENST00000484487 ASAP1Q9ULH1 1129 aa8.31□□□□□ -1.08
PDZRN3-209ENST00000484487 PCDHB13Q9Y5F0 798 aa8.31□□□□□ -1.08
PDZRN3-209ENST00000484487 RNF123Q5XPI4 1314 aa8.3□□□□□ -1.08
PDZRN3-209ENST00000484487 TNS1Q9HBL0 1735 aaKnown RBP8.3□□□□□ -1.08
PDZRN3-209ENST00000484487 KCNQ2O43526 872 aa8.3□□□□□ -1.08
PDZRN3-209ENST00000484487 PTCD1O75127 700 aaKnown RBP8.3□□□□□ -1.08
PDZRN3-209ENST00000484487 EIF2S2P20042 333 aaKnown RBP8.3□□□□□ -1.08
PDZRN3-209ENST00000484487 RRP1P56182 461 aaKnown RBP8.3□□□□□ -1.08
PDZRN3-209ENST00000484487 KRT24Q2M2I5 525 aa8.3□□□□□ -1.08
PDZRN3-209ENST00000484487 IFNLR1Q8IU57 520 aaPredicted RBP8.3□□□□□ -1.08
PDZRN3-209ENST00000484487 ARHGAP45Q92619 1136 aa8.3□□□□□ -1.08
PDZRN3-209ENST00000484487 PALLDQ8WX93 1383 aa8.3□□□□□ -1.08
PDZRN3-209ENST00000484487 PTPRCP08575 1304 aa8.29□□□□□ -1.08
PDZRN3-209ENST00000484487 BCAR3O75815 825 aa8.29□□□□□ -1.08
PDZRN3-209ENST00000484487 PYGBP11216 843 aa8.29□□□□□ -1.08
PDZRN3-209ENST00000484487 FAM182BQ5T319 152 aa8.29□□□□□ -1.08
PDZRN3-209ENST00000484487 ZKSCAN2Q63HK3 967 aa8.29□□□□□ -1.08
PDZRN3-209ENST00000484487 MRPL50Q8N5N7 158 aaKnown RBP8.29□□□□□ -1.08
PDZRN3-209ENST00000484487 API5Q9BZZ5 524 aaKnown RBP8.29□□□□□ -1.08
PDZRN3-209ENST00000484487 DDX21Q9NR30 783 aaKnown RBP eCLIP8.29□□□□□ -1.08
PDZRN3-209ENST00000484487 HYPKQ9NX55 129 aa8.29□□□□□ -1.08
PDZRN3-209ENST00000484487 RREB1Q92766 1687 aa8.29□□□□□ -1.08
PDZRN3-209ENST00000484487 MYH14Q7Z406 1995 aaKnown RBP8.29□□□□□ -1.08
PDZRN3-209ENST00000484487 AFDNP55196 1824 aaKnown RBP8.29□□□□□ -1.08
PDZRN3-209ENST00000484487 LOC102724428A0A0B4J2F2 783 aa8.28□□□□□ -1.08
PDZRN3-209ENST00000484487 ATP6V1AP38606 617 aa8.28□□□□□ -1.08
PDZRN3-209ENST00000484487 SIK1P57059 783 aa8.28□□□□□ -1.08
PDZRN3-209ENST00000484487 PDE3AQ14432 1141 aa8.28□□□□□ -1.08
PDZRN3-209ENST00000484487 FRAT1Q92837 279 aaPredicted RBP8.28□□□□□ -1.08
PDZRN3-209ENST00000484487 BCL2L13Q9BXK5 485 aa8.28□□□□□ -1.08
PDZRN3-209ENST00000484487 TRPC6Q9Y210 931 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms