RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
CPSF4-213ENST00000484112 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
CPSF4-213ENST00000484112 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
CPSF4-213ENST00000484112 NFIXQ14938 502 aa13.43□□□□□ -0.26
CPSF4-213ENST00000484112 SOS1Q07889 1333 aaPredicted RBP13.42□□□□□ -0.26
CPSF4-213ENST00000484112 ARFGEF1Q9Y6D6 1849 aa13.42□□□□□ -0.26
CPSF4-213ENST00000484112 HMOX1P09601 288 aa13.42□□□□□ -0.26
CPSF4-213ENST00000484112 CYP19A1P11511 503 aaPredicted RBP13.42□□□□□ -0.26
CPSF4-213ENST00000484112 SMC1BQ8NDV3 1235 aa13.42□□□□□ -0.26
CPSF4-213ENST00000484112 NARFQ9UHQ1 456 aa13.42□□□□□ -0.26
CPSF4-213ENST00000484112 TJP1Q07157 1748 aa13.42□□□□□ -0.26
CPSF4-213ENST00000484112 WDR90Q96KV7 1748 aa13.42□□□□□ -0.26
CPSF4-213ENST00000484112 RNMTO43148 476 aaKnown RBP13.41□□□□□ -0.26
CPSF4-213ENST00000484112 CAPN15O75808 1086 aa13.41□□□□□ -0.26
CPSF4-213ENST00000484112 SERPINB2P05120 415 aa13.41□□□□□ -0.26
CPSF4-213ENST00000484112 CANXP27824 592 aaKnown RBP13.41□□□□□ -0.26
CPSF4-213ENST00000484112 COL13A1Q5TAT6 717 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-213ENST00000484112 BICDL1Q6ZP65 573 aa13.41□□□□□ -0.26
CPSF4-213ENST00000484112 C2CD5Q86YS7 1000 aa13.41□□□□□ -0.26
CPSF4-213ENST00000484112 ZBTB1Q9Y2K1 713 aa13.41□□□□□ -0.26
CPSF4-213ENST00000484112 TTLL6Q8N841 843 aa13.4□□□□□ -0.26
CPSF4-213ENST00000484112 JMYQ8N9B5 988 aa13.4□□□□□ -0.26
CPSF4-213ENST00000484112 DIAPH1O60610 1272 aaKnown RBP13.39□□□□□ -0.27
CPSF4-213ENST00000484112 LMNB1P20700 586 aa13.39□□□□□ -0.27
CPSF4-213ENST00000484112 MTHFSDQ2M296 383 aaKnown RBP13.39□□□□□ -0.27
CPSF4-213ENST00000484112 CFAP53Q96M91 514 aa13.39□□□□□ -0.27
CPSF4-213ENST00000484112 BCL2L12Q9HB09 334 aa13.39□□□□□ -0.27
CPSF4-213ENST00000484112 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
CPSF4-213ENST00000484112 COL15A1P39059 1388 aa13.39□□□□□ -0.27
CPSF4-213ENST00000484112 GLTPD2A6NH11 291 aa13.38□□□□□ -0.27
CPSF4-213ENST00000484112 H0YIN7 160 aa13.38□□□□□ -0.27
CPSF4-213ENST00000484112 VEGFAP15692 232 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-213ENST00000484112 PRELPP51888 382 aa13.38□□□□□ -0.27
CPSF4-213ENST00000484112 RALBP1Q15311 655 aa13.38□□□□□ -0.27
CPSF4-213ENST00000484112 ZNF330Q9Y3S2 320 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-213ENST00000484112 SCN11AQ9UI33 1791 aa13.37□□□□□ -0.27
CPSF4-213ENST00000484112 PPP2R1AP30153 589 aa13.37□□□□□ -0.27
CPSF4-213ENST00000484112 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
CPSF4-213ENST00000484112 ZNF622Q969S3 477 aaKnown RBP eCLIP13.37□□□□□ -0.27
CPSF4-213ENST00000484112 COL3A1P02461 1466 aaPredicted RBP13.36□□□□□ -0.27
CPSF4-213ENST00000484112 SBF1O95248 1867 aa13.36□□□□□ -0.27
CPSF4-213ENST00000484112 DDX10Q13206 875 aaKnown RBP13.36□□□□□ -0.27
CPSF4-213ENST00000484112 CNGB1Q14028 1251 aaPredicted RBP13.36□□□□□ -0.27
CPSF4-213ENST00000484112 TNS4Q8IZW8 715 aa13.36□□□□□ -0.27
CPSF4-213ENST00000484112 VSIG10Q8N0Z9 540 aa13.36□□□□□ -0.27
CPSF4-213ENST00000484112 CCDC24Q8N4L8 307 aa13.36□□□□□ -0.27
CPSF4-213ENST00000484112 ADAMTS7Q9UKP4 1686 aa13.36□□□□□ -0.27
CPSF4-213ENST00000484112 ZC3H4Q9UPT8 1303 aaKnown RBP13.36□□□□□ -0.27
CPSF4-213ENST00000484112 CARMIL3Q8ND23 1372 aa13.35□□□□□ -0.27
CPSF4-213ENST00000484112 TNRC6CQ9HCJ0 1690 aaKnown RBP13.35□□□□□ -0.27
CPSF4-213ENST00000484112 NFKBIEO00221 500 aa13.35□□□□□ -0.27
CPSF4-213ENST00000484112 STARD3NLO95772 234 aa13.35□□□□□ -0.27
CPSF4-213ENST00000484112 DPY19L2Q6NUT2 758 aa13.35□□□□□ -0.27
CPSF4-213ENST00000484112 NUDCQ9Y266 331 aa13.35□□□□□ -0.27
CPSF4-213ENST00000484112 A0A087WZG4 1122 aa13.34□□□□□ -0.27
CPSF4-213ENST00000484112 ZNF316A6NFI3 1004 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-213ENST00000484112 C21orf2O43822 256 aa13.34□□□□□ -0.27
CPSF4-213ENST00000484112 TBC1D9BQ66K14 1250 aa13.34□□□□□ -0.27
CPSF4-213ENST00000484112 TBC1D2BQ9UPU7 963 aa13.34□□□□□ -0.27
CPSF4-213ENST00000484112 AFDNP55196 1824 aaKnown RBP13.34□□□□□ -0.27
CPSF4-213ENST00000484112 NPHP1O15259 732 aa13.33□□□□□ -0.28
CPSF4-213ENST00000484112 HSPA1AP0DMV8 641 aaKnown RBP13.33□□□□□ -0.28
CPSF4-213ENST00000484112 HSPA1BP0DMV9 641 aaKnown RBP13.33□□□□□ -0.28
CPSF4-213ENST00000484112 EIF5P55010 431 aaKnown RBP13.33□□□□□ -0.28
CPSF4-213ENST00000484112 ERFEQ4G0M1 354 aa13.33□□□□□ -0.28
CPSF4-213ENST00000484112 MRC1P22897 1456 aa13.32□□□□□ -0.28
CPSF4-213ENST00000484112 U2SURPO15042 1029 aaKnown RBP13.32□□□□□ -0.28
CPSF4-213ENST00000484112 PDE6BP35913 854 aa13.32□□□□□ -0.28
CPSF4-213ENST00000484112 TEFQ10587 303 aa13.32□□□□□ -0.28
CPSF4-213ENST00000484112 NPM2Q86SE8 214 aaKnown RBP13.32□□□□□ -0.28
CPSF4-213ENST00000484112 ZNF496Q96IT1 587 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-213ENST00000484112 POTECB2RU33 542 aa13.31□□□□□ -0.28
CPSF4-213ENST00000484112 PRR5LQ6MZQ0 368 aa13.31□□□□□ -0.28
CPSF4-213ENST00000484112 BRIP1Q9BX63 1249 aa13.31□□□□□ -0.28
CPSF4-213ENST00000484112 NRXN2Q9P2S2 1712 aa13.3□□□□□ -0.28
CPSF4-213ENST00000484112 A1BGP04217 495 aa13.3□□□□□ -0.28
CPSF4-213ENST00000484112 ZNF790Q6PG37 636 aa13.3□□□□□ -0.28
CPSF4-213ENST00000484112 IL17REQ8NFR9 667 aa13.3□□□□□ -0.28
CPSF4-213ENST00000484112 TEX13AQ9BXU3 409 aaPredicted RBP13.3□□□□□ -0.28
CPSF4-213ENST00000484112 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
CPSF4-213ENST00000484112 SETDB2Q96T68 719 aa13.29□□□□□ -0.28
CPSF4-213ENST00000484112 TAOK3Q9H2K8 898 aa13.29□□□□□ -0.28
CPSF4-213ENST00000484112 PDZRN3Q9UPQ7 1066 aa13.29□□□□□ -0.28
CPSF4-213ENST00000484112 MYBBP1AQ9BQG0 1328 aaKnown RBP13.29□□□□□ -0.28
CPSF4-213ENST00000484112 HEG1Q9ULI3 1381 aa13.29□□□□□ -0.28
CPSF4-213ENST00000484112 DLEC1Q9Y238 1755 aa13.28□□□□□ -0.28
CPSF4-213ENST00000484112 CCDC88AQ3V6T2 1871 aa13.28□□□□□ -0.28
CPSF4-213ENST00000484112 DDNO94850 711 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-213ENST00000484112 IL6STP40189 918 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-213ENST00000484112 ST5P78524 1137 aa13.28□□□□□ -0.28
CPSF4-213ENST00000484112 CNBD1Q8NA66 436 aa13.28□□□□□ -0.28
CPSF4-213ENST00000484112 GAS2L2Q8NHY3 880 aa13.28□□□□□ -0.28
CPSF4-213ENST00000484112 FMNL2Q96PY5 1086 aa13.28□□□□□ -0.28
CPSF4-213ENST00000484112 MKRN1Q9UHC7 482 aaKnown RBP13.28□□□□□ -0.28
CPSF4-213ENST00000484112 TIAM2Q8IVF5 1701 aa13.27□□□□□ -0.28
CPSF4-213ENST00000484112 KCNQ3O43525 872 aa13.27□□□□□ -0.29
CPSF4-213ENST00000484112 PIP4K2AP48426 406 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-213ENST00000484112 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
CPSF4-213ENST00000484112 CNKSR1Q969H4 720 aa13.27□□□□□ -0.29
CPSF4-213ENST00000484112 PNNQ9H307 717 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms