RNA–Protein interactions for RNA: ENST00000484050.1

LYSMD4-207, Transcript of LysM domain containing 4, humanhuman

TSL 4

Gene LYSMD4, Length 551 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-207ENST00000484050 DDR1Q08345 913 aa33.21■■■□□ 2.91
LYSMD4-207ENST00000484050 USPL1Q5W0Q7 1092 aa33.2■■■□□ 2.91
LYSMD4-207ENST00000484050 BRCA1P38398 1863 aaKnown RBP33.19■■■□□ 2.9
LYSMD4-207ENST00000484050 A0A0G2JLW4 131 aa33.18■■■□□ 2.9
LYSMD4-207ENST00000484050 STARD3NLO95772 234 aa33.18■■■□□ 2.9
LYSMD4-207ENST00000484050 CANXP27824 592 aaKnown RBP33.17■■■□□ 2.9
LYSMD4-207ENST00000484050 NARFQ9UHQ1 456 aa33.17■■■□□ 2.9
LYSMD4-207ENST00000484050 BTBD11A6QL63 1104 aa33.16■■■□□ 2.9
LYSMD4-207ENST00000484050 KCNQ3O43525 872 aa33.16■■■□□ 2.9
LYSMD4-207ENST00000484050 TM4SF1P30408 202 aa33.16■■■□□ 2.9
LYSMD4-207ENST00000484050 MCM10Q7L590 875 aa33.16■■■□□ 2.9
LYSMD4-207ENST00000484050 DPEP1P16444 411 aa33.15■■■□□ 2.9
LYSMD4-207ENST00000484050 DLG5Q8TDM6 1919 aa33.15■■■□□ 2.9
LYSMD4-207ENST00000484050 RTF1Q92541 710 aaKnown RBP33.15■■■□□ 2.9
LYSMD4-207ENST00000484050 FMNL2Q96PY5 1086 aa33.15■■■□□ 2.9
LYSMD4-207ENST00000484050 POLRMTO00411 1230 aaKnown RBP33.14■■■□□ 2.9
LYSMD4-207ENST00000484050 TEX13AQ9BXU3 409 aaPredicted RBP33.14■■■□□ 2.9
LYSMD4-207ENST00000484050 AFDNP55196 1824 aaKnown RBP33.14■■■□□ 2.9
LYSMD4-207ENST00000484050 DCTN1Q14203 1278 aa33.13■■■□□ 2.89
LYSMD4-207ENST00000484050 EIF5P55010 431 aaKnown RBP33.12■■■□□ 2.89
LYSMD4-207ENST00000484050 BCL2L12Q9HB09 334 aa33.12■■■□□ 2.89
LYSMD4-207ENST00000484050 BCS1LQ9Y276 419 aa33.11■■■□□ 2.89
LYSMD4-207ENST00000484050 HTATSF1O43719 755 aaKnown RBP33.1■■■□□ 2.89
LYSMD4-207ENST00000484050 NFIXQ14938 502 aa33.1■■■□□ 2.89
LYSMD4-207ENST00000484050 NRXN2Q9P2S2 1712 aa33.1■■■□□ 2.89
LYSMD4-207ENST00000484050 KCNA3P22001 575 aa33.09■■■□□ 2.89
LYSMD4-207ENST00000484050 ATP10DQ9P241 1426 aa33.09■■■□□ 2.89
LYSMD4-207ENST00000484050 SCN7AQ01118 1682 aa33.08■■■□□ 2.89
LYSMD4-207ENST00000484050 ADCY9O60503 1353 aa33.08■■■□□ 2.89
LYSMD4-207ENST00000484050 DDX10Q13206 875 aaKnown RBP33.07■■■□□ 2.88
LYSMD4-207ENST00000484050 ARFGEF1Q9Y6D6 1849 aa33.07■■■□□ 2.88
LYSMD4-207ENST00000484050 A0A087WZG4 1122 aa33.06■■■□□ 2.88
LYSMD4-207ENST00000484050 PLEKHF1Q96S99 279 aa33.06■■■□□ 2.88
LYSMD4-207ENST00000484050 A1BGP04217 495 aa33.05■■■□□ 2.88
LYSMD4-207ENST00000484050 ZNF330Q9Y3S2 320 aaPredicted RBP33.05■■■□□ 2.88
LYSMD4-207ENST00000484050 NEFMP07197 916 aa33.04■■■□□ 2.88
LYSMD4-207ENST00000484050 IL6STP40189 918 aaPredicted RBP33.04■■■□□ 2.88
LYSMD4-207ENST00000484050 RALBP1Q15311 655 aa33.04■■■□□ 2.88
LYSMD4-207ENST00000484050 PRAMEF22A3QJZ6 481 aa33.02■■■□□ 2.88
LYSMD4-207ENST00000484050 CHRNA5P30532 468 aa33.02■■■□□ 2.88
LYSMD4-207ENST00000484050 TBC1D2BQ9UPU7 963 aa33.02■■■□□ 2.88
LYSMD4-207ENST00000484050 USP16Q9Y5T5 823 aa33.02■■■□□ 2.88
LYSMD4-207ENST00000484050 SERPINB2P05120 415 aa33.01■■■□□ 2.87
LYSMD4-207ENST00000484050 PIM2Q9P1W9 311 aa33.01■■■□□ 2.87
LYSMD4-207ENST00000484050 GIGYF1O75420 1035 aaPredicted RBP33■■■□□ 2.87
LYSMD4-207ENST00000484050 TAF7Q15545 349 aaPredicted RBP33■■■□□ 2.87
LYSMD4-207ENST00000484050 BCORQ6W2J9 1755 aa32.99■■■□□ 2.87
LYSMD4-207ENST00000484050 KDM3BQ7LBC6 1761 aa32.99■■■□□ 2.87
LYSMD4-207ENST00000484050 BICDL1Q6ZP65 573 aa32.99■■■□□ 2.87
LYSMD4-207ENST00000484050 SNRPA1P09661 255 aaKnown RBP32.98■■■□□ 2.87
LYSMD4-207ENST00000484050 C1QTNF8P60827 252 aa32.98■■■□□ 2.87
LYSMD4-207ENST00000484050 NFE2L2Q16236 605 aa32.98■■■□□ 2.87
LYSMD4-207ENST00000484050 DLEC1Q9Y238 1755 aa32.97■■■□□ 2.87
LYSMD4-207ENST00000484050 PIP4K2AP48426 406 aaPredicted RBP32.97■■■□□ 2.87
LYSMD4-207ENST00000484050 TBC1D9BQ66K14 1250 aa32.97■■■□□ 2.87
LYSMD4-207ENST00000484050 ARHGAP27Q6ZUM4 889 aa32.97■■■□□ 2.87
LYSMD4-207ENST00000484050 MIS18AQ9NYP9 233 aa32.97■■■□□ 2.87
LYSMD4-207ENST00000484050 DALRD3Q5D0E6 543 aaKnown RBP32.96■■■□□ 2.87
LYSMD4-207ENST00000484050 LAMB4A4D0S4 1761 aa32.96■■■□□ 2.87
LYSMD4-207ENST00000484050 NPM2Q86SE8 214 aaKnown RBP32.95■■■□□ 2.87
LYSMD4-207ENST00000484050 PNNQ9H307 717 aaKnown RBP32.95■■■□□ 2.87
LYSMD4-207ENST00000484050 MAPK8IP3Q9UPT6 1336 aa32.95■■■□□ 2.86
LYSMD4-207ENST00000484050 CARMIL3Q8ND23 1372 aa32.95■■■□□ 2.86
LYSMD4-207ENST00000484050 ZNF526Q8TF50 670 aaPredicted RBP32.94■■■□□ 2.86
LYSMD4-207ENST00000484050 ANKRD31Q8N7Z5 1873 aa32.93■■■□□ 2.86
LYSMD4-207ENST00000484050 CAMTA2O94983 1202 aa32.93■■■□□ 2.86
LYSMD4-207ENST00000484050 THUMPD2Q9BTF0 503 aaKnown RBP32.93■■■□□ 2.86
LYSMD4-207ENST00000484050 GPBP1L1Q9HC44 474 aaPredicted RBP32.93■■■□□ 2.86
LYSMD4-207ENST00000484050 DZIP3Q86Y13 1208 aaKnown RBP32.92■■■□□ 2.86
LYSMD4-207ENST00000484050 MYBBP1AQ9BQG0 1328 aaKnown RBP32.92■■■□□ 2.86
LYSMD4-207ENST00000484050 PNISRQ8TF01 805 aaKnown RBP32.89■■■□□ 2.86
LYSMD4-207ENST00000484050 NBPF26B4DH59 902 aa32.88■■■□□ 2.85
LYSMD4-207ENST00000484050 NBPF10Q6P3W6 841 aaKnown RBP32.88■■■□□ 2.85
LYSMD4-207ENST00000484050 NBPF15Q8N660 670 aa32.88■■■□□ 2.85
LYSMD4-207ENST00000484050 PRR5LQ6MZQ0 368 aa32.85■■■□□ 2.85
LYSMD4-207ENST00000484050 C2CD5Q86YS7 1000 aa32.85■■■□□ 2.85
LYSMD4-207ENST00000484050 SETDB2Q96T68 719 aa32.85■■■□□ 2.85
LYSMD4-207ENST00000484050 CCDC24Q8N4L8 307 aa32.84■■■□□ 2.85
LYSMD4-207ENST00000484050 COL11A2P13942 1736 aaPredicted RBP32.84■■■□□ 2.85
LYSMD4-207ENST00000484050 SBF1O95248 1867 aa32.84■■■□□ 2.85
LYSMD4-207ENST00000484050 H0YIN7 160 aa32.83■■■□□ 2.85
LYSMD4-207ENST00000484050 EIF4A1P60842 406 aaKnown RBP32.83■■■□□ 2.85
LYSMD4-207ENST00000484050 SENP3-EIF4A1A0A087X0R7 540 aa32.81■■■□□ 2.84
LYSMD4-207ENST00000484050 RIPK4P57078 832 aa32.81■■■□□ 2.84
LYSMD4-207ENST00000484050 C9orf131Q5VYM1 1079 aa32.81■■■□□ 2.84
LYSMD4-207ENST00000484050 CLEC4GQ6UXB4 293 aa32.8■■■□□ 2.84
LYSMD4-207ENST00000484050 BRIP1Q9BX63 1249 aa32.8■■■□□ 2.84
LYSMD4-207ENST00000484050 TMPOP42166 694 aaKnown RBP32.79■■■□□ 2.84
LYSMD4-207ENST00000484050 TTLL6Q8N841 843 aa32.79■■■□□ 2.84
LYSMD4-207ENST00000484050 CNBD1Q8NA66 436 aa32.79■■■□□ 2.84
LYSMD4-207ENST00000484050 PDE6BP35913 854 aa32.78■■■□□ 2.84
LYSMD4-207ENST00000484050 ZNF652Q9Y2D9 606 aa32.78■■■□□ 2.84
LYSMD4-207ENST00000484050 CCDC146Q8IYE0 955 aa32.77■■■□□ 2.84
LYSMD4-207ENST00000484050 NPHP1O15259 732 aa32.76■■■□□ 2.83
LYSMD4-207ENST00000484050 PRKRIP1Q9H875 184 aaPredicted RBP32.75■■■□□ 2.83
LYSMD4-207ENST00000484050 RNF181Q9P0P0 153 aa32.75■■■□□ 2.83
LYSMD4-207ENST00000484050 RRP7AQ9Y3A4 280 aaKnown RBP32.75■■■□□ 2.83
LYSMD4-207ENST00000484050 CACNA1SQ13698 1873 aa32.74■■■□□ 2.83
LYSMD4-207ENST00000484050 KIF3CO14782 793 aa32.74■■■□□ 2.83
LYSMD4-207ENST00000484050 ST5P78524 1137 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms