RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 PHAXQ9H814 394 aaKnown RBP16.87■□□□□ 0.29
RXRB-205ENST00000483821 HDAC5Q9UQL6 1122 aa16.87■□□□□ 0.29
RXRB-205ENST00000483821 F6X3S4 739 aa16.86■□□□□ 0.29
RXRB-205ENST00000483821 KSR2Q6VAB6 950 aa16.86■□□□□ 0.29
RXRB-205ENST00000483821 DNAAF4Q8WXU2 420 aa16.86■□□□□ 0.29
RXRB-205ENST00000483821 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.86■□□□□ 0.29
RXRB-205ENST00000483821 AFF2P51816 1311 aa16.86■□□□□ 0.29
RXRB-205ENST00000483821 BCL9O00512 1426 aa16.86■□□□□ 0.29
RXRB-205ENST00000483821 PRAMEF22A3QJZ6 481 aa16.85■□□□□ 0.29
RXRB-205ENST00000483821 STARD3NLO95772 234 aa16.85■□□□□ 0.29
RXRB-205ENST00000483821 IGHDP01880 384 aa16.85■□□□□ 0.29
RXRB-205ENST00000483821 PRIM1P49642 420 aaKnown RBP16.85■□□□□ 0.29
RXRB-205ENST00000483821 RPAP2Q8IXW5 612 aaPredicted RBP16.85■□□□□ 0.29
RXRB-205ENST00000483821 MARCH10Q8NA82 808 aaPredicted RBP16.85■□□□□ 0.29
RXRB-205ENST00000483821 SYTL4Q96C24 671 aaPredicted RBP16.85■□□□□ 0.29
RXRB-205ENST00000483821 GJD4Q96KN9 370 aaPredicted RBP16.85■□□□□ 0.29
RXRB-205ENST00000483821 SRCIN1Q9C0H9 1055 aa16.85■□□□□ 0.29
RXRB-205ENST00000483821 USP16Q9Y5T5 823 aa16.85■□□□□ 0.29
RXRB-205ENST00000483821 A0A0G2JS52 829 aa16.84■□□□□ 0.29
RXRB-205ENST00000483821 PI4KAP2A4QPH2 592 aa16.84■□□□□ 0.29
RXRB-205ENST00000483821 PTCD1O75127 700 aaKnown RBP16.84■□□□□ 0.29
RXRB-205ENST00000483821 MYT1Q01538 1121 aa16.84■□□□□ 0.29
RXRB-205ENST00000483821 PDIA6Q15084 440 aa16.84■□□□□ 0.29
RXRB-205ENST00000483821 PI4KAP1Q8N8J0 262 aa16.84■□□□□ 0.29
RXRB-205ENST00000483821 ATG3Q9NT62 314 aa16.84■□□□□ 0.29
RXRB-205ENST00000483821 ALDH1L1O75891 902 aa16.83■□□□□ 0.28
RXRB-205ENST00000483821 SMARCC1Q92922 1105 aaPredicted RBP16.83■□□□□ 0.28
RXRB-205ENST00000483821 ASAP1Q9ULH1 1129 aa16.83■□□□□ 0.28
RXRB-205ENST00000483821 GNAI2P04899 355 aa16.82■□□□□ 0.28
RXRB-205ENST00000483821 NEXNQ0ZGT2 675 aa16.82■□□□□ 0.28
RXRB-205ENST00000483821 PAPPAQ13219 1627 aa16.81■□□□□ 0.28
RXRB-205ENST00000483821 KCPQ6ZWJ8 1503 aa16.81■□□□□ 0.28
RXRB-205ENST00000483821 ATP10DQ9P241 1426 aa16.81■□□□□ 0.28
RXRB-205ENST00000483821 ONECUT3O60422 494 aaPredicted RBP16.81■□□□□ 0.28
RXRB-205ENST00000483821 HMMRO75330 724 aa16.81■□□□□ 0.28
RXRB-205ENST00000483821 ANXA1P04083 346 aa16.81■□□□□ 0.28
RXRB-205ENST00000483821 MYL6BP14649 208 aa16.81■□□□□ 0.28
RXRB-205ENST00000483821 PROSER3Q2NL68 480 aa16.81■□□□□ 0.28
RXRB-205ENST00000483821 RIC3Q7Z5B4 369 aa16.81■□□□□ 0.28
RXRB-205ENST00000483821 GCC1Q96CN9 775 aa16.81■□□□□ 0.28
RXRB-205ENST00000483821 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
RXRB-205ENST00000483821 MAP3K2Q9Y2U5 619 aa16.81■□□□□ 0.28
RXRB-205ENST00000483821 ATRNO75882 1429 aa16.8■□□□□ 0.28
RXRB-205ENST00000483821 AIMP1Q12904 312 aaKnown RBP16.8■□□□□ 0.28
RXRB-205ENST00000483821 BEND3Q5T5X7 828 aa16.8■□□□□ 0.28
RXRB-205ENST00000483821 ANKRD13DQ6ZTN6 518 aa16.8■□□□□ 0.28
RXRB-205ENST00000483821 COPS6Q7L5N1 327 aa16.8■□□□□ 0.28
RXRB-205ENST00000483821 XAGE3Q8WTP9 111 aa16.8■□□□□ 0.28
RXRB-205ENST00000483821 QTRT2Q9H974 415 aaKnown RBP16.8■□□□□ 0.28
RXRB-205ENST00000483821 UBR2Q8IWV8 1755 aa16.79■□□□□ 0.28
RXRB-205ENST00000483821 TOGARAM1Q9Y4F4 1720 aa16.79■□□□□ 0.28
RXRB-205ENST00000483821 IBTKQ9P2D0 1353 aaPredicted RBP16.79■□□□□ 0.28
RXRB-205ENST00000483821 UBTFL1P0CB47 393 aaPredicted RBP16.79■□□□□ 0.28
RXRB-205ENST00000483821 ANKRD44Q8N8A2 993 aa16.79■□□□□ 0.28
RXRB-205ENST00000483821 LINS1Q8NG48 757 aa16.79■□□□□ 0.28
RXRB-205ENST00000483821 MEIS3Q99687 375 aa16.79■□□□□ 0.28
RXRB-205ENST00000483821 ADCY9O60503 1353 aa16.78■□□□□ 0.28
RXRB-205ENST00000483821 SMC5Q8IY18 1101 aa16.78■□□□□ 0.28
RXRB-205ENST00000483821 PLBD2Q8NHP8 589 aa16.78■□□□□ 0.28
RXRB-205ENST00000483821 LAMB4A4D0S4 1761 aa16.77■□□□□ 0.28
RXRB-205ENST00000483821 ZNF772Q68DY9 489 aaPredicted RBP16.77■□□□□ 0.28
RXRB-205ENST00000483821 NPM2Q86SE8 214 aaKnown RBP16.77■□□□□ 0.28
RXRB-205ENST00000483821 METTL22Q9BUU2 404 aaPredicted RBP16.77■□□□□ 0.28
RXRB-205ENST00000483821 USP44Q9H0E7 712 aa16.77■□□□□ 0.28
RXRB-205ENST00000483821 C1orf115Q9H7X2 142 aa16.77■□□□□ 0.28
RXRB-205ENST00000483821 C5P01031 1676 aa16.76■□□□□ 0.27
RXRB-205ENST00000483821 ITGB4P16144 1822 aa16.76■□□□□ 0.27
RXRB-205ENST00000483821 A1BGP04217 495 aa16.76■□□□□ 0.27
RXRB-205ENST00000483821 LRP10Q7Z4F1 713 aa16.76■□□□□ 0.27
RXRB-205ENST00000483821 DNAJC10Q8IXB1 793 aa16.76■□□□□ 0.27
RXRB-205ENST00000483821 ACSBG1Q96GR2 724 aa16.76■□□□□ 0.27
RXRB-205ENST00000483821 C9orf78Q9NZ63 289 aaPredicted RBP16.76■□□□□ 0.27
RXRB-205ENST00000483821 ZBTB47Q9UFB7 747 aaPredicted RBP16.76■□□□□ 0.27
RXRB-205ENST00000483821 NBPF26B4DH59 902 aa16.75■□□□□ 0.27
RXRB-205ENST00000483821 NBPF14Q5TI25 921 aa16.75■□□□□ 0.27
RXRB-205ENST00000483821 CEP85Q6P2H3 762 aa16.75■□□□□ 0.27
RXRB-205ENST00000483821 NBPF10Q6P3W6 841 aaKnown RBP16.75■□□□□ 0.27
RXRB-205ENST00000483821 NBPF15Q8N660 670 aa16.75■□□□□ 0.27
RXRB-205ENST00000483821 SEPT12Q8IYM1 358 aa16.74■□□□□ 0.27
RXRB-205ENST00000483821 PDZRN3Q9UPQ7 1066 aa16.74■□□□□ 0.27
RXRB-205ENST00000483821 THSD7AQ9UPZ6 1657 aa16.74■□□□□ 0.27
RXRB-205ENST00000483821 GLI3P10071 1580 aa16.73■□□□□ 0.27
RXRB-205ENST00000483821 CYP19A1P11511 503 aaPredicted RBP16.73■□□□□ 0.27
RXRB-205ENST00000483821 ATP8B2P98198 1209 aa16.73■□□□□ 0.27
RXRB-205ENST00000483821 KIF6Q6ZMV9 814 aa16.73■□□□□ 0.27
RXRB-205ENST00000483821 DCTPP1Q9H773 170 aa16.73■□□□□ 0.27
RXRB-205ENST00000483821 DOT1LQ8TEK3 1739 aa16.73■□□□□ 0.27
RXRB-205ENST00000483821 N4BP2Q86UW6 1770 aaPredicted RBP16.72■□□□□ 0.27
RXRB-205ENST00000483821 LOC102724428A0A0B4J2F2 783 aa16.72■□□□□ 0.27
RXRB-205ENST00000483821 SIK1P57059 783 aa16.72■□□□□ 0.27
RXRB-205ENST00000483821 NUCB1Q02818 461 aa16.72■□□□□ 0.27
RXRB-205ENST00000483821 SIRT2Q8IXJ6 389 aa16.72■□□□□ 0.27
RXRB-205ENST00000483821 GRM8O00222 908 aa16.71■□□□□ 0.27
RXRB-205ENST00000483821 HMGB2P26583 209 aaKnown RBP16.71■□□□□ 0.27
RXRB-205ENST00000483821 ATP6V1AP38606 617 aa16.71■□□□□ 0.27
RXRB-205ENST00000483821 MYD88Q99836 296 aa16.71■□□□□ 0.27
RXRB-205ENST00000483821 LRRFIP2Q9Y608 721 aaKnown RBP16.71■□□□□ 0.27
RXRB-205ENST00000483821 PALLDQ8WX93 1383 aa16.71■□□□□ 0.27
RXRB-205ENST00000483821 UTYO14607 1347 aa16.7■□□□□ 0.26
RXRB-205ENST00000483821 KAT6BQ8WYB5 2073 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms