RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 PRAMEF22A3QJZ6 481 aa20.59■□□□□ 0.89
RFTN1-209ENST00000483671 DDX21Q9NR30 783 aaKnown RBP eCLIP20.59■□□□□ 0.89
RFTN1-209ENST00000483671 ATG3Q9NT62 314 aa20.59■□□□□ 0.89
RFTN1-209ENST00000483671 ITPRIPQ8IWB1 547 aa20.58■□□□□ 0.89
RFTN1-209ENST00000483671 NECTIN2Q92692 538 aa20.58■□□□□ 0.89
RFTN1-209ENST00000483671 HYPKQ9NX55 129 aa20.58■□□□□ 0.89
RFTN1-209ENST00000483671 PDIA6Q15084 440 aa20.57■□□□□ 0.88
RFTN1-209ENST00000483671 PRIM1P49642 420 aaKnown RBP20.56■□□□□ 0.88
RFTN1-209ENST00000483671 QTRT2Q9H974 415 aaKnown RBP20.56■□□□□ 0.88
RFTN1-209ENST00000483671 ZBTB40Q9NUA8 1239 aa20.56■□□□□ 0.88
RFTN1-209ENST00000483671 ASAP1Q9ULH1 1129 aa20.56■□□□□ 0.88
RFTN1-209ENST00000483671 N4BP2Q86UW6 1770 aaPredicted RBP20.56■□□□□ 0.88
RFTN1-209ENST00000483671 FKBP5Q13451 457 aaPredicted RBP20.55■□□□□ 0.88
RFTN1-209ENST00000483671 TEX13AQ9BXU3 409 aaPredicted RBP20.55■□□□□ 0.88
RFTN1-209ENST00000483671 USP16Q9Y5T5 823 aa20.55■□□□□ 0.88
RFTN1-209ENST00000483671 ZBTB7BO15156 539 aaPredicted RBP20.54■□□□□ 0.88
RFTN1-209ENST00000483671 CCT4P50991 539 aaKnown RBP20.54■□□□□ 0.88
RFTN1-209ENST00000483671 ZNF772Q68DY9 489 aaPredicted RBP20.54■□□□□ 0.88
RFTN1-209ENST00000483671 PROSER3Q2NL68 480 aa20.53■□□□□ 0.88
RFTN1-209ENST00000483671 LRP10Q7Z4F1 713 aa20.53■□□□□ 0.88
RFTN1-209ENST00000483671 PHAXQ9H814 394 aaKnown RBP20.53■□□□□ 0.88
RFTN1-209ENST00000483671 CICQ96RK0 1608 aaPredicted RBP20.53■□□□□ 0.88
RFTN1-209ENST00000483671 KDM2BQ8NHM5 1336 aa20.52■□□□□ 0.88
RFTN1-209ENST00000483671 PTCD1O75127 700 aaKnown RBP20.52■□□□□ 0.87
RFTN1-209ENST00000483671 IBTKQ9P2D0 1353 aaPredicted RBP20.51■□□□□ 0.87
RFTN1-209ENST00000483671 ATP10DQ9P241 1426 aa20.51■□□□□ 0.87
RFTN1-209ENST00000483671 SEPT12Q8IYM1 358 aa20.51■□□□□ 0.87
RFTN1-209ENST00000483671 SYTL4Q96C24 671 aaPredicted RBP20.51■□□□□ 0.87
RFTN1-209ENST00000483671 ADCY9O60503 1353 aa20.5■□□□□ 0.87
RFTN1-209ENST00000483671 A0A0G2JS52 829 aa20.5■□□□□ 0.87
RFTN1-209ENST00000483671 F6X3S4 739 aa20.5■□□□□ 0.87
RFTN1-209ENST00000483671 MYT1Q01538 1121 aa20.5■□□□□ 0.87
RFTN1-209ENST00000483671 CENPQQ7L2Z9 268 aaPredicted RBP20.5■□□□□ 0.87
RFTN1-209ENST00000483671 SMARCC1Q92922 1105 aaPredicted RBP20.5■□□□□ 0.87
RFTN1-209ENST00000483671 PCDHB15Q9Y5E8 787 aa20.5■□□□□ 0.87
RFTN1-209ENST00000483671 ZNF831Q5JPB2 1677 aa20.49■□□□□ 0.87
RFTN1-209ENST00000483671 NHSQ6T4R5 1651 aa20.49■□□□□ 0.87
RFTN1-209ENST00000483671 DDX58O95786 925 aaKnown RBP20.49■□□□□ 0.87
RFTN1-209ENST00000483671 ANXA1P04083 346 aa20.49■□□□□ 0.87
RFTN1-209ENST00000483671 KSR2Q6VAB6 950 aa20.49■□□□□ 0.87
RFTN1-209ENST00000483671 DNAAF4Q8WXU2 420 aa20.48■□□□□ 0.87
RFTN1-209ENST00000483671 ACSBG1Q96GR2 724 aa20.48■□□□□ 0.87
RFTN1-209ENST00000483671 PI4KAP2A4QPH2 592 aa20.47■□□□□ 0.87
RFTN1-209ENST00000483671 NBPF26B4DH59 902 aa20.47■□□□□ 0.87
RFTN1-209ENST00000483671 STARD3NLO95772 234 aa20.47■□□□□ 0.87
RFTN1-209ENST00000483671 RBM6P78332 1123 aaKnown RBP20.47■□□□□ 0.87
RFTN1-209ENST00000483671 NBPF14Q5TI25 921 aa20.47■□□□□ 0.87
RFTN1-209ENST00000483671 NBPF10Q6P3W6 841 aaKnown RBP20.47■□□□□ 0.87
RFTN1-209ENST00000483671 NBPF15Q8N660 670 aa20.47■□□□□ 0.87
RFTN1-209ENST00000483671 PI4KAP1Q8N8J0 262 aa20.47■□□□□ 0.87
RFTN1-209ENST00000483671 SLC4A9Q96Q91 983 aa20.47■□□□□ 0.87
RFTN1-209ENST00000483671 TJP1Q07157 1748 aa20.46■□□□□ 0.87
RFTN1-209ENST00000483671 HDAC1Q13547 482 aaPredicted RBP20.46■□□□□ 0.87
RFTN1-209ENST00000483671 SLC4A10Q6U841 1118 aa20.46■□□□□ 0.87
RFTN1-209ENST00000483671 DNAJC10Q8IXB1 793 aa20.46■□□□□ 0.87
RFTN1-209ENST00000483671 KAT6BQ8WYB5 2073 aa20.45■□□□□ 0.86
RFTN1-209ENST00000483671 PALLDQ8WX93 1383 aa20.45■□□□□ 0.86
RFTN1-209ENST00000483671 KCNQ2O43526 872 aa20.45■□□□□ 0.86
RFTN1-209ENST00000483671 BEND3Q5T5X7 828 aa20.45■□□□□ 0.86
RFTN1-209ENST00000483671 XAGE3Q8WTP9 111 aa20.45■□□□□ 0.86
RFTN1-209ENST00000483671 RBM42Q9BTD8 480 aaKnown RBP20.45■□□□□ 0.86
RFTN1-209ENST00000483671 COPS6Q7L5N1 327 aa20.44■□□□□ 0.86
RFTN1-209ENST00000483671 RWDD1Q9H446 243 aaPredicted RBP20.44■□□□□ 0.86
RFTN1-209ENST00000483671 ALDH1L1O75891 902 aa20.43■□□□□ 0.86
RFTN1-209ENST00000483671 CYP19A1P11511 503 aaPredicted RBP20.43■□□□□ 0.86
RFTN1-209ENST00000483671 MYL6BP14649 208 aa20.43■□□□□ 0.86
RFTN1-209ENST00000483671 SRCIN1Q9C0H9 1055 aa20.43■□□□□ 0.86
RFTN1-209ENST00000483671 MAP3K2Q9Y2U5 619 aa20.43■□□□□ 0.86
RFTN1-209ENST00000483671 LOC102724428A0A0B4J2F2 783 aa20.42■□□□□ 0.86
RFTN1-209ENST00000483671 IGHDP01880 384 aa20.42■□□□□ 0.86
RFTN1-209ENST00000483671 A1BGP04217 495 aa20.42■□□□□ 0.86
RFTN1-209ENST00000483671 GNAI3P08754 354 aa20.42■□□□□ 0.86
RFTN1-209ENST00000483671 SIK1P57059 783 aa20.42■□□□□ 0.86
RFTN1-209ENST00000483671 PELP1Q8IZL8 1130 aaKnown RBP20.42■□□□□ 0.86
RFTN1-209ENST00000483671 MEIS3Q99687 375 aa20.42■□□□□ 0.86
RFTN1-209ENST00000483671 SBF2Q86WG5 1849 aa20.42■□□□□ 0.86
RFTN1-209ENST00000483671 ANKRD13DQ6ZTN6 518 aa20.41■□□□□ 0.86
RFTN1-209ENST00000483671 LINS1Q8NG48 757 aa20.41■□□□□ 0.86
RFTN1-209ENST00000483671 RREB1Q92766 1687 aa20.41■□□□□ 0.86
RFTN1-209ENST00000483671 KRT27Q7Z3Y8 459 aa20.4■□□□□ 0.86
RFTN1-209ENST00000483671 PLBD2Q8NHP8 589 aa20.4■□□□□ 0.86
RFTN1-209ENST00000483671 BTAF1O14981 1849 aa20.4■□□□□ 0.86
RFTN1-209ENST00000483671 AIMP1Q12904 312 aaKnown RBP20.39■□□□□ 0.85
RFTN1-209ENST00000483671 FAM196AQ6ZSG2 479 aa20.39■□□□□ 0.85
RFTN1-209ENST00000483671 METTL22Q9BUU2 404 aaPredicted RBP20.39■□□□□ 0.85
RFTN1-209ENST00000483671 USP44Q9H0E7 712 aa20.39■□□□□ 0.85
RFTN1-209ENST00000483671 BRWD3Q6RI45 1802 aa20.38■□□□□ 0.85
RFTN1-209ENST00000483671 RIC3Q7Z5B4 369 aa20.38■□□□□ 0.85
RFTN1-209ENST00000483671 RPAP2Q8IXW5 612 aaPredicted RBP20.38■□□□□ 0.85
RFTN1-209ENST00000483671 ATP6V1AP38606 617 aa20.37■□□□□ 0.85
RFTN1-209ENST00000483671 PIP4K2AP48426 406 aaPredicted RBP20.37■□□□□ 0.85
RFTN1-209ENST00000483671 BCL11BQ9C0K0 894 aaPredicted RBP20.37■□□□□ 0.85
RFTN1-209ENST00000483671 NUP188Q5SRE5 1749 aa20.37■□□□□ 0.85
RFTN1-209ENST00000483671 ARFGEF2Q9Y6D5 1785 aa20.36■□□□□ 0.85
RFTN1-209ENST00000483671 COL5A3P25940 1745 aaPredicted RBP20.36■□□□□ 0.85
RFTN1-209ENST00000483671 UTYO14607 1347 aa20.36■□□□□ 0.85
RFTN1-209ENST00000483671 GNAI2P04899 355 aa20.36■□□□□ 0.85
RFTN1-209ENST00000483671 IL6STP40189 918 aaPredicted RBP20.36■□□□□ 0.85
RFTN1-209ENST00000483671 NEXNQ0ZGT2 675 aa20.36■□□□□ 0.85
RFTN1-209ENST00000483671 ANKRD44Q8N8A2 993 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms