RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 H0YHG0 523 aa9.25□□□□□ -0.93
COL4A5-205ENST00000483338 MX1P20591 662 aa9.25□□□□□ -0.93
COL4A5-205ENST00000483338 SARNPP82979 210 aaKnown RBP9.25□□□□□ -0.93
COL4A5-205ENST00000483338 TTLL5Q6EMB2 1281 aa9.25□□□□□ -0.93
COL4A5-205ENST00000483338 CWC27Q6UX04 472 aaKnown RBP9.25□□□□□ -0.93
COL4A5-205ENST00000483338 PDRG1Q9NUG6 133 aa9.25□□□□□ -0.93
COL4A5-205ENST00000483338 DISP3Q9P2K9 1392 aa9.25□□□□□ -0.93
COL4A5-205ENST00000483338 SCAF11Q99590 1463 aaKnown RBP9.25□□□□□ -0.93
COL4A5-205ENST00000483338 CALRP27797 417 aaKnown RBP9.25□□□□□ -0.93
COL4A5-205ENST00000483338 NAIF1Q69YI7 327 aaPredicted RBP9.25□□□□□ -0.93
COL4A5-205ENST00000483338 TTC37Q6PGP7 1564 aa9.25□□□□□ -0.93
COL4A5-205ENST00000483338 SASH3O75995 380 aa9.25□□□□□ -0.93
COL4A5-205ENST00000483338 IVLP07476 585 aa9.25□□□□□ -0.93
COL4A5-205ENST00000483338 CHD1LQ86WJ1 897 aa9.25□□□□□ -0.93
COL4A5-205ENST00000483338 ZNF513Q8N8E2 541 aaPredicted RBP9.25□□□□□ -0.93
COL4A5-205ENST00000483338 TSPOAP1O95153 1857 aa9.25□□□□□ -0.93
COL4A5-205ENST00000483338 NUP155O75694 1391 aa9.25□□□□□ -0.93
COL4A5-205ENST00000483338 COL17A1Q9UMD9 1497 aaPredicted RBP9.25□□□□□ -0.93
COL4A5-205ENST00000483338 SEC31AO94979 1220 aaKnown RBP9.24□□□□□ -0.93
COL4A5-205ENST00000483338 CACTINQ8WUQ7 758 aaKnown RBP9.24□□□□□ -0.93
COL4A5-205ENST00000483338 ANKRD50Q9ULJ7 1429 aa9.24□□□□□ -0.93
COL4A5-205ENST00000483338 ATP10AO60312 1499 aa9.24□□□□□ -0.93
COL4A5-205ENST00000483338 ARID4AP29374 1257 aaPredicted RBP9.24□□□□□ -0.93
COL4A5-205ENST00000483338 SMC1AQ14683 1233 aaKnown RBP9.24□□□□□ -0.93
COL4A5-205ENST00000483338 PTPN14Q15678 1187 aa9.24□□□□□ -0.93
COL4A5-205ENST00000483338 ARHGAP29Q52LW3 1261 aa9.24□□□□□ -0.93
COL4A5-205ENST00000483338 TMCO3Q6UWJ1 677 aa9.24□□□□□ -0.93
COL4A5-205ENST00000483338 GPRASP1Q5JY77 1395 aa9.24□□□□□ -0.93
COL4A5-205ENST00000483338 AATKQ6ZMQ8 1374 aa9.24□□□□□ -0.93
COL4A5-205ENST00000483338 RBM5P52756 815 aaKnown RBP eCLIP9.24□□□□□ -0.93
COL4A5-205ENST00000483338 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
COL4A5-205ENST00000483338 PLEKHO1Q53GL0 409 aaPredicted RBP9.24□□□□□ -0.93
COL4A5-205ENST00000483338 GIMAP6Q6P9H5 292 aa9.24□□□□□ -0.93
COL4A5-205ENST00000483338 DNAAF4Q8WXU2 420 aa9.24□□□□□ -0.93
COL4A5-205ENST00000483338 SRRTQ9BXP5 876 aaKnown RBP9.24□□□□□ -0.93
COL4A5-205ENST00000483338 CCDC141Q6ZP82 1450 aa9.23□□□□□ -0.93
COL4A5-205ENST00000483338 YEATS2Q9ULM3 1422 aa9.23□□□□□ -0.93
COL4A5-205ENST00000483338 SMC2O95347 1197 aa9.23□□□□□ -0.93
COL4A5-205ENST00000483338 DZIP1LQ8IYY4 767 aaKnown RBP9.23□□□□□ -0.93
COL4A5-205ENST00000483338 MIEF2Q96C03 454 aa9.23□□□□□ -0.93
COL4A5-205ENST00000483338 SYCP2Q9BX26 1530 aa9.23□□□□□ -0.93
COL4A5-205ENST00000483338 CCDC171Q6TFL3 1326 aa9.23□□□□□ -0.93
COL4A5-205ENST00000483338 ANKRD33BA6NCL7 494 aa9.23□□□□□ -0.93
COL4A5-205ENST00000483338 TBC1D8O95759 1140 aa9.23□□□□□ -0.93
COL4A5-205ENST00000483338 MNAT1P51948 309 aa9.23□□□□□ -0.93
COL4A5-205ENST00000483338 SLC24A3Q9HC58 644 aa9.23□□□□□ -0.93
COL4A5-205ENST00000483338 RPS6KL1Q9Y6S9 549 aa9.23□□□□□ -0.93
COL4A5-205ENST00000483338 C21orf2O43822 256 aa9.22□□□□□ -0.93
COL4A5-205ENST00000483338 TPM1P09493 284 aa9.22□□□□□ -0.93
COL4A5-205ENST00000483338 LEKR1Q6ZMV7 388 aa9.22□□□□□ -0.93
COL4A5-205ENST00000483338 MORC1Q86VD1 984 aa9.22□□□□□ -0.93
COL4A5-205ENST00000483338 KAT2BQ92831 832 aa9.22□□□□□ -0.93
COL4A5-205ENST00000483338 CCDC34Q96HJ3 373 aa9.22□□□□□ -0.93
COL4A5-205ENST00000483338 MRVI1Q9Y6F6 885 aa9.22□□□□□ -0.93
COL4A5-205ENST00000483338 KIF2AO00139 706 aaPredicted RBP9.22□□□□□ -0.93
COL4A5-205ENST00000483338 ST18O60284 1047 aa9.22□□□□□ -0.93
COL4A5-205ENST00000483338 LIG1P18858 919 aa9.22□□□□□ -0.93
COL4A5-205ENST00000483338 CASTP20810 708 aaKnown RBP9.22□□□□□ -0.93
COL4A5-205ENST00000483338 DRC7Q8IY82 874 aa9.22□□□□□ -0.93
COL4A5-205ENST00000483338 L2HGDHQ9H9P8 463 aa9.22□□□□□ -0.93
COL4A5-205ENST00000483338 TADA2BQ86TJ2 420 aa9.22□□□□□ -0.93
COL4A5-205ENST00000483338 ARHGEF12Q9NZN5 1544 aa9.21□□□□□ -0.93
COL4A5-205ENST00000483338 CDC45O75419 566 aa9.21□□□□□ -0.93
COL4A5-205ENST00000483338 RPS6KA5O75582 802 aa9.21□□□□□ -0.93
COL4A5-205ENST00000483338 NEBLO76041 1014 aa9.21□□□□□ -0.93
COL4A5-205ENST00000483338 SETQ01105 290 aaPredicted RBP9.21□□□□□ -0.93
COL4A5-205ENST00000483338 CCDC144BQ3MJ40 725 aa9.21□□□□□ -0.93
COL4A5-205ENST00000483338 EFCAB13Q8IY85 973 aa9.21□□□□□ -0.93
COL4A5-205ENST00000483338 CCDC144CPQ8IYA2 1237 aa9.21□□□□□ -0.93
COL4A5-205ENST00000483338 PIK3C2GO75747 1445 aa9.21□□□□□ -0.94
COL4A5-205ENST00000483338 CT47B1P0C2W7 299 aaPredicted RBP9.21□□□□□ -0.94
COL4A5-205ENST00000483338 PAX7P23759 505 aa9.21□□□□□ -0.94
COL4A5-205ENST00000483338 ANKRD45Q5TZF3 282 aa9.21□□□□□ -0.94
COL4A5-205ENST00000483338 ZKSCAN2Q63HK3 967 aa9.21□□□□□ -0.94
COL4A5-205ENST00000483338 ORC3Q9UBD5 711 aaPredicted RBP9.21□□□□□ -0.94
COL4A5-205ENST00000483338 ATP8B1O43520 1251 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 CCDC93Q567U6 631 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 KCNV1Q6PIU1 500 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 PRPF38AQ8NAV1 312 aaKnown RBP9.2□□□□□ -0.94
COL4A5-205ENST00000483338 PRDM16Q9HAZ2 1276 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 ARGLU1Q9NWB6 273 aaPredicted RBP9.2□□□□□ -0.94
COL4A5-205ENST00000483338 STAG3Q9UJ98 1225 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 TAOK2Q9UL54 1235 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 ITSN2Q9NZM3 1697 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 FILIP1Q7Z7B0 1213 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 ITPRIPQ8IWB1 547 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 TATDN2Q93075 761 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 TESK2Q96S53 571 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 H3BQF6 201 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 HNRNPH1P31943 449 aaKnown RBP9.2□□□□□ -0.94
COL4A5-205ENST00000483338 MICALL1Q8N3F8 863 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 NBPF3Q9H094 633 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 TRMT1Q9NXH9 659 aaKnown RBP9.2□□□□□ -0.94
COL4A5-205ENST00000483338 ELP1O95163 1332 aa9.2□□□□□ -0.94
COL4A5-205ENST00000483338 IPO8O15397 1037 aaKnown RBP9.19□□□□□ -0.94
COL4A5-205ENST00000483338 CAND2O75155 1236 aa9.19□□□□□ -0.94
COL4A5-205ENST00000483338 CPLX2Q6PUV4 134 aaKnown RBP9.19□□□□□ -0.94
COL4A5-205ENST00000483338 LUZP1Q86V48 1076 aa9.19□□□□□ -0.94
COL4A5-205ENST00000483338 PLA2G4DQ86XP0 818 aa9.19□□□□□ -0.94
COL4A5-205ENST00000483338 TMEM87AQ8NBN3 555 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms