RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 AKAP4Q5JQC9 854 aa10.08□□□□□ -0.8
CSDE1-206ENST00000483030 KLRG1Q96E93 195 aa10.08□□□□□ -0.8
CSDE1-206ENST00000483030 PCGF6Q9BYE7 350 aa10.08□□□□□ -0.8
CSDE1-206ENST00000483030 SLC52A2Q9HAB3 445 aa10.08□□□□□ -0.8
CSDE1-206ENST00000483030 KIAA1551Q9HCM1 1747 aa10.07□□□□□ -0.8
CSDE1-206ENST00000483030 CYP19A1P11511 503 aaPredicted RBP10.07□□□□□ -0.8
CSDE1-206ENST00000483030 NFIXQ14938 502 aa10.07□□□□□ -0.8
CSDE1-206ENST00000483030 KNSTRNQ9Y448 316 aa10.07□□□□□ -0.8
CSDE1-206ENST00000483030 KCPQ6ZWJ8 1503 aa10.07□□□□□ -0.8
CSDE1-206ENST00000483030 SOS1Q07889 1333 aaPredicted RBP10.07□□□□□ -0.8
CSDE1-206ENST00000483030 KIF13BQ9NQT8 1826 aa10.06□□□□□ -0.8
CSDE1-206ENST00000483030 RNMTO43148 476 aaKnown RBP10.06□□□□□ -0.8
CSDE1-206ENST00000483030 RASSF7Q02833 373 aa10.06□□□□□ -0.8
CSDE1-206ENST00000483030 JMYQ8N9B5 988 aa10.06□□□□□ -0.8
CSDE1-206ENST00000483030 NARFQ9UHQ1 456 aa10.06□□□□□ -0.8
CSDE1-206ENST00000483030 ZNF831Q5JPB2 1677 aa10.06□□□□□ -0.8
CSDE1-206ENST00000483030 SERPINB2P05120 415 aa10.05□□□□□ -0.8
CSDE1-206ENST00000483030 HMOX1P09601 288 aa10.05□□□□□ -0.8
CSDE1-206ENST00000483030 COL13A1Q5TAT6 717 aaPredicted RBP10.05□□□□□ -0.8
CSDE1-206ENST00000483030 SMC1BQ8NDV3 1235 aa10.05□□□□□ -0.8
CSDE1-206ENST00000483030 BCL2L12Q9HB09 334 aa10.05□□□□□ -0.8
CSDE1-206ENST00000483030 ZBTB1Q9Y2K1 713 aa10.05□□□□□ -0.8
CSDE1-206ENST00000483030 MYH14Q7Z406 1995 aaKnown RBP10.05□□□□□ -0.8
CSDE1-206ENST00000483030 GLTPD2A6NH11 291 aa10.04□□□□□ -0.8
CSDE1-206ENST00000483030 VEGFAP15692 232 aaPredicted RBP10.04□□□□□ -0.8
CSDE1-206ENST00000483030 LMNB1P20700 586 aa10.04□□□□□ -0.8
CSDE1-206ENST00000483030 CANXP27824 592 aaKnown RBP10.04□□□□□ -0.8
CSDE1-206ENST00000483030 PRELPP51888 382 aa10.04□□□□□ -0.8
CSDE1-206ENST00000483030 MTHFSDQ2M296 383 aaKnown RBP10.04□□□□□ -0.8
CSDE1-206ENST00000483030 C2CD5Q86YS7 1000 aa10.04□□□□□ -0.8
CSDE1-206ENST00000483030 TTLL6Q8N841 843 aa10.04□□□□□ -0.8
CSDE1-206ENST00000483030 COL5A3P25940 1745 aaPredicted RBP10.04□□□□□ -0.8
CSDE1-206ENST00000483030 CLSPNQ9HAW4 1339 aa10.04□□□□□ -0.8
CSDE1-206ENST00000483030 H0YIN7 160 aa10.03□□□□□ -0.8
CSDE1-206ENST00000483030 BICDL1Q6ZP65 573 aa10.03□□□□□ -0.8
CSDE1-206ENST00000483030 VSIG10Q8N0Z9 540 aa10.03□□□□□ -0.8
CSDE1-206ENST00000483030 COL15A1P39059 1388 aa10.02□□□□□ -0.8
CSDE1-206ENST00000483030 CAPN15O75808 1086 aa10.02□□□□□ -0.81
CSDE1-206ENST00000483030 ZC3H4Q9UPT8 1303 aaKnown RBP10.02□□□□□ -0.81
CSDE1-206ENST00000483030 NFKBIEO00221 500 aa10.01□□□□□ -0.81
CSDE1-206ENST00000483030 DIAPH1O60610 1272 aaKnown RBP10.01□□□□□ -0.81
CSDE1-206ENST00000483030 STARD3NLO95772 234 aa10.01□□□□□ -0.81
CSDE1-206ENST00000483030 EIF5P55010 431 aaKnown RBP10.01□□□□□ -0.81
CSDE1-206ENST00000483030 TTC5Q8N0Z6 440 aa10.01□□□□□ -0.81
CSDE1-206ENST00000483030 ZNF622Q969S3 477 aaKnown RBP eCLIP10.01□□□□□ -0.81
CSDE1-206ENST00000483030 ZNF219Q9P2Y4 722 aaPredicted RBP10.01□□□□□ -0.81
CSDE1-206ENST00000483030 POTECB2RU33 542 aa10□□□□□ -0.81
CSDE1-206ENST00000483030 TBC1D9BQ66K14 1250 aa10□□□□□ -0.81
CSDE1-206ENST00000483030 DPY19L2Q6NUT2 758 aa10□□□□□ -0.81
CSDE1-206ENST00000483030 TNS4Q8IZW8 715 aa10□□□□□ -0.81
CSDE1-206ENST00000483030 CCDC24Q8N4L8 307 aa10□□□□□ -0.81
CSDE1-206ENST00000483030 BRCA1P38398 1863 aaKnown RBP10□□□□□ -0.81
CSDE1-206ENST00000483030 CARMIL3Q8ND23 1372 aa10□□□□□ -0.81
CSDE1-206ENST00000483030 TJP1Q07157 1748 aa9.99□□□□□ -0.81
CSDE1-206ENST00000483030 ARFGEF1Q9Y6D6 1849 aa9.99□□□□□ -0.81
CSDE1-206ENST00000483030 A0A087WZG4 1122 aa9.99□□□□□ -0.81
CSDE1-206ENST00000483030 C21orf2O43822 256 aa9.99□□□□□ -0.81
CSDE1-206ENST00000483030 CC2D1BQ5T0F9 858 aaKnown RBP9.99□□□□□ -0.81
CSDE1-206ENST00000483030 ZNF496Q96IT1 587 aaPredicted RBP9.99□□□□□ -0.81
CSDE1-206ENST00000483030 BRIP1Q9BX63 1249 aa9.99□□□□□ -0.81
CSDE1-206ENST00000483030 TBC1D2BQ9UPU7 963 aa9.99□□□□□ -0.81
CSDE1-206ENST00000483030 ZNF330Q9Y3S2 320 aaPredicted RBP9.99□□□□□ -0.81
CSDE1-206ENST00000483030 WDR90Q96KV7 1748 aa9.99□□□□□ -0.81
CSDE1-206ENST00000483030 PDE6BP35913 854 aa9.98□□□□□ -0.81
CSDE1-206ENST00000483030 ERFEQ4G0M1 354 aa9.98□□□□□ -0.81
CSDE1-206ENST00000483030 IL17REQ8NFR9 667 aa9.98□□□□□ -0.81
CSDE1-206ENST00000483030 ADAMTS7Q9UKP4 1686 aa9.98□□□□□ -0.81
CSDE1-206ENST00000483030 PER1O15534 1290 aaPredicted RBP9.97□□□□□ -0.81
CSDE1-206ENST00000483030 A1BGP04217 495 aa9.97□□□□□ -0.81
CSDE1-206ENST00000483030 HSPA1AP0DMV8 641 aaKnown RBP9.97□□□□□ -0.81
CSDE1-206ENST00000483030 HSPA1BP0DMV9 641 aaKnown RBP9.97□□□□□ -0.81
CSDE1-206ENST00000483030 TEFQ10587 303 aa9.97□□□□□ -0.81
CSDE1-206ENST00000483030 CNGB1Q14028 1251 aaPredicted RBP9.97□□□□□ -0.81
CSDE1-206ENST00000483030 PRR5LQ6MZQ0 368 aa9.97□□□□□ -0.81
CSDE1-206ENST00000483030 ZNF790Q6PG37 636 aa9.97□□□□□ -0.81
CSDE1-206ENST00000483030 TEX13AQ9BXU3 409 aaPredicted RBP9.97□□□□□ -0.81
CSDE1-206ENST00000483030 PDZRN3Q9UPQ7 1066 aa9.97□□□□□ -0.81
CSDE1-206ENST00000483030 MRC1P22897 1456 aa9.97□□□□□ -0.81
CSDE1-206ENST00000483030 GNAT3A8MTJ3 354 aa9.96□□□□□ -0.82
CSDE1-206ENST00000483030 U2SURPO15042 1029 aaKnown RBP9.96□□□□□ -0.82
CSDE1-206ENST00000483030 NPHP1O15259 732 aa9.96□□□□□ -0.82
CSDE1-206ENST00000483030 IL6STP40189 918 aaPredicted RBP9.96□□□□□ -0.82
CSDE1-206ENST00000483030 NPM2Q86SE8 214 aaKnown RBP9.96□□□□□ -0.82
CSDE1-206ENST00000483030 SETDB2Q96T68 719 aa9.96□□□□□ -0.82
CSDE1-206ENST00000483030 KIF7Q2M1P5 1343 aa9.96□□□□□ -0.82
CSDE1-206ENST00000483030 HEG1Q9ULI3 1381 aa9.96□□□□□ -0.82
CSDE1-206ENST00000483030 SCN11AQ9UI33 1791 aa9.96□□□□□ -0.82
CSDE1-206ENST00000483030 KCNQ3O43525 872 aa9.95□□□□□ -0.82
CSDE1-206ENST00000483030 DDNO94850 711 aaPredicted RBP9.95□□□□□ -0.82
CSDE1-206ENST00000483030 CAMTA2O94983 1202 aa9.95□□□□□ -0.82
CSDE1-206ENST00000483030 CNBD1Q8NA66 436 aa9.95□□□□□ -0.82
CSDE1-206ENST00000483030 GAS2L2Q8NHY3 880 aa9.95□□□□□ -0.82
CSDE1-206ENST00000483030 CCER1Q8TC90 406 aaPredicted RBP9.95□□□□□ -0.82
CSDE1-206ENST00000483030 CNKSR1Q969H4 720 aa9.95□□□□□ -0.82
CSDE1-206ENST00000483030 FMNL2Q96PY5 1086 aa9.95□□□□□ -0.82
CSDE1-206ENST00000483030 TAOK3Q9H2K8 898 aa9.95□□□□□ -0.82
CSDE1-206ENST00000483030 POTEIP0CG38 1075 aa9.94□□□□□ -0.82
CSDE1-206ENST00000483030 POTEJP0CG39 1038 aa9.94□□□□□ -0.82
CSDE1-206ENST00000483030 SRGNP10124 158 aa9.94□□□□□ -0.82
CSDE1-206ENST00000483030 STYK1Q6J9G0 422 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms