RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 AKAP4Q5JQC9 854 aa17.52■□□□□ 0.4
ZKSCAN1-204ENST00000482979 LGR6Q9HBX8 967 aa17.52■□□□□ 0.4
ZKSCAN1-204ENST00000482979 N4BP2Q86UW6 1770 aaPredicted RBP17.51■□□□□ 0.39
ZKSCAN1-204ENST00000482979 MRC1P22897 1456 aa17.51■□□□□ 0.39
ZKSCAN1-204ENST00000482979 CRKLP46109 303 aaKnown RBP17.51■□□□□ 0.39
ZKSCAN1-204ENST00000482979 NLGN1Q8N2Q7 840 aa17.51■□□□□ 0.39
ZKSCAN1-204ENST00000482979 C10orf71Q711Q0 1435 aa17.51■□□□□ 0.39
ZKSCAN1-204ENST00000482979 ZBED9Q6R2W3 1325 aa17.5■□□□□ 0.39
ZKSCAN1-204ENST00000482979 RFC4P35249 363 aa17.5■□□□□ 0.39
ZKSCAN1-204ENST00000482979 ADAMTS7Q9UKP4 1686 aa17.5■□□□□ 0.39
ZKSCAN1-204ENST00000482979 SLC52A2Q9HAB3 445 aa17.49■□□□□ 0.39
ZKSCAN1-204ENST00000482979 RNMTO43148 476 aaKnown RBP17.48■□□□□ 0.39
ZKSCAN1-204ENST00000482979 LMOD3Q0VAK6 560 aa17.48■□□□□ 0.39
ZKSCAN1-204ENST00000482979 NGEFQ8N5V2 710 aa17.48■□□□□ 0.39
ZKSCAN1-204ENST00000482979 SRP68Q9UHB9 627 aaKnown RBP17.48■□□□□ 0.39
ZKSCAN1-204ENST00000482979 GNAT3A8MTJ3 354 aa17.47■□□□□ 0.39
ZKSCAN1-204ENST00000482979 INTS5Q6P9B9 1019 aaKnown RBP17.47■□□□□ 0.39
ZKSCAN1-204ENST00000482979 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
ZKSCAN1-204ENST00000482979 TRIM35Q9UPQ4 493 aa17.47■□□□□ 0.39
ZKSCAN1-204ENST00000482979 KCPQ6ZWJ8 1503 aa17.47■□□□□ 0.39
ZKSCAN1-204ENST00000482979 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
ZKSCAN1-204ENST00000482979 TGFB2P61812 414 aa17.47■□□□□ 0.39
ZKSCAN1-204ENST00000482979 SLC39A6Q13433 755 aa17.47■□□□□ 0.39
ZKSCAN1-204ENST00000482979 DCTN1Q14203 1278 aa17.47■□□□□ 0.39
ZKSCAN1-204ENST00000482979 DNAJC10Q8IXB1 793 aa17.47■□□□□ 0.39
ZKSCAN1-204ENST00000482979 THUMPD2Q9BTF0 503 aaKnown RBP17.47■□□□□ 0.39
ZKSCAN1-204ENST00000482979 USP42Q9H9J4 1324 aaKnown RBP17.46■□□□□ 0.39
ZKSCAN1-204ENST00000482979 FKBP8Q14318 412 aa17.46■□□□□ 0.39
ZKSCAN1-204ENST00000482979 CCDC27Q2M243 656 aa17.46■□□□□ 0.39
ZKSCAN1-204ENST00000482979 MCM10Q7L590 875 aa17.46■□□□□ 0.39
ZKSCAN1-204ENST00000482979 WWC1Q8IX03 1113 aa17.46■□□□□ 0.39
ZKSCAN1-204ENST00000482979 BRCA1P38398 1863 aaKnown RBP17.46■□□□□ 0.38
ZKSCAN1-204ENST00000482979 DPEP1P16444 411 aa17.45■□□□□ 0.38
ZKSCAN1-204ENST00000482979 DDR1Q08345 913 aa17.45■□□□□ 0.38
ZKSCAN1-204ENST00000482979 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
ZKSCAN1-204ENST00000482979 ZNF526Q8TF50 670 aaPredicted RBP17.45■□□□□ 0.38
ZKSCAN1-204ENST00000482979 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
ZKSCAN1-204ENST00000482979 PARP3Q9Y6F1 533 aa17.45■□□□□ 0.38
ZKSCAN1-204ENST00000482979 ZNF521Q96K83 1311 aa17.43■□□□□ 0.38
ZKSCAN1-204ENST00000482979 GPBP1L1Q9HC44 474 aaPredicted RBP17.43■□□□□ 0.38
ZKSCAN1-204ENST00000482979 BCS1LQ9Y276 419 aa17.43■□□□□ 0.38
ZKSCAN1-204ENST00000482979 SOS1Q07889 1333 aaPredicted RBP17.43■□□□□ 0.38
ZKSCAN1-204ENST00000482979 UBR2Q8IWV8 1755 aa17.42■□□□□ 0.38
ZKSCAN1-204ENST00000482979 HTATSF1O43719 755 aaKnown RBP17.42■□□□□ 0.38
ZKSCAN1-204ENST00000482979 CYP19A1P11511 503 aaPredicted RBP17.42■□□□□ 0.38
ZKSCAN1-204ENST00000482979 KCNA3P22001 575 aa17.42■□□□□ 0.38
ZKSCAN1-204ENST00000482979 SIPA1L3O60292 1781 aaPredicted RBP17.41■□□□□ 0.38
ZKSCAN1-204ENST00000482979 GOLGA2Q08379 1002 aa17.4■□□□□ 0.38
ZKSCAN1-204ENST00000482979 USPL1Q5W0Q7 1092 aa17.4■□□□□ 0.38
ZKSCAN1-204ENST00000482979 IL17REQ8NFR9 667 aa17.4■□□□□ 0.38
ZKSCAN1-204ENST00000482979 ZBTB1Q9Y2K1 713 aa17.4■□□□□ 0.38
ZKSCAN1-204ENST00000482979 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
ZKSCAN1-204ENST00000482979 POLRMTO00411 1230 aaKnown RBP17.39■□□□□ 0.38
ZKSCAN1-204ENST00000482979 TM4SF1P30408 202 aa17.39■□□□□ 0.38
ZKSCAN1-204ENST00000482979 CALD1Q05682 793 aaKnown RBP17.39■□□□□ 0.38
ZKSCAN1-204ENST00000482979 WDR63Q8IWG1 891 aa17.39■□□□□ 0.38
ZKSCAN1-204ENST00000482979 CDCA7LQ96GN5 454 aa17.38■□□□□ 0.37
ZKSCAN1-204ENST00000482979 ARFGEF1Q9Y6D6 1849 aa17.38■□□□□ 0.37
ZKSCAN1-204ENST00000482979 COL15A1P39059 1388 aa17.38■□□□□ 0.37
ZKSCAN1-204ENST00000482979 CEMIPQ8WUJ3 1361 aa17.38■□□□□ 0.37
ZKSCAN1-204ENST00000482979 TEFQ10587 303 aa17.38■□□□□ 0.37
ZKSCAN1-204ENST00000482979 BCL2L12Q9HB09 334 aa17.38■□□□□ 0.37
ZKSCAN1-204ENST00000482979 KIF3CO14782 793 aa17.37■□□□□ 0.37
ZKSCAN1-204ENST00000482979 ZPR1O75312 459 aa17.37■□□□□ 0.37
ZKSCAN1-204ENST00000482979 ARHGAP27Q6ZUM4 889 aa17.37■□□□□ 0.37
ZKSCAN1-204ENST00000482979 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
ZKSCAN1-204ENST00000482979 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
ZKSCAN1-204ENST00000482979 IL16Q14005 1332 aa17.37■□□□□ 0.37
ZKSCAN1-204ENST00000482979 AFDNP55196 1824 aaKnown RBP17.37■□□□□ 0.37
ZKSCAN1-204ENST00000482979 KDM3BQ7LBC6 1761 aa17.36■□□□□ 0.37
ZKSCAN1-204ENST00000482979 E9PSI1 815 aa17.36■□□□□ 0.37
ZKSCAN1-204ENST00000482979 CHRNA5P30532 468 aa17.36■□□□□ 0.37
ZKSCAN1-204ENST00000482979 NARFQ9UHQ1 456 aa17.36■□□□□ 0.37
ZKSCAN1-204ENST00000482979 NRXN2Q9P2S2 1712 aa17.35■□□□□ 0.37
ZKSCAN1-204ENST00000482979 SLFN5Q08AF3 891 aa17.35■□□□□ 0.37
ZKSCAN1-204ENST00000482979 NFIXQ14938 502 aa17.35■□□□□ 0.37
ZKSCAN1-204ENST00000482979 TSR2Q969E8 191 aaKnown RBP17.35■□□□□ 0.37
ZKSCAN1-204ENST00000482979 IFT57Q9NWB7 429 aa17.35■□□□□ 0.37
ZKSCAN1-204ENST00000482979 PIM2Q9P1W9 311 aa17.35■□□□□ 0.37
ZKSCAN1-204ENST00000482979 CANXP27824 592 aaKnown RBP17.34■□□□□ 0.37
ZKSCAN1-204ENST00000482979 GNAI1P63096 354 aa17.34■□□□□ 0.37
ZKSCAN1-204ENST00000482979 ZNF496Q96IT1 587 aaPredicted RBP17.34■□□□□ 0.37
ZKSCAN1-204ENST00000482979 FANCIQ9NVI1 1328 aa17.33■□□□□ 0.37
ZKSCAN1-204ENST00000482979 TTC5Q8N0Z6 440 aa17.33■□□□□ 0.36
ZKSCAN1-204ENST00000482979 MYH16Q9H6N6 1097 aa17.33■□□□□ 0.36
ZKSCAN1-204ENST00000482979 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
ZKSCAN1-204ENST00000482979 CEP350Q5VT06 3117 aa17.33■□□□□ 0.36
ZKSCAN1-204ENST00000482979 HEG1Q9ULI3 1381 aa17.32■□□□□ 0.36
ZKSCAN1-204ENST00000482979 TAF7Q15545 349 aaPredicted RBP17.32■□□□□ 0.36
ZKSCAN1-204ENST00000482979 DALRD3Q5D0E6 543 aaKnown RBP17.32■□□□□ 0.36
ZKSCAN1-204ENST00000482979 ZNF790Q6PG37 636 aa17.32■□□□□ 0.36
ZKSCAN1-204ENST00000482979 CFAP44Q96MT7 982 aa17.32■□□□□ 0.36
ZKSCAN1-204ENST00000482979 TSPYL4Q9UJ04 414 aa17.32■□□□□ 0.36
ZKSCAN1-204ENST00000482979 ZNF853P0CG23 659 aa17.31■□□□□ 0.36
ZKSCAN1-204ENST00000482979 EIF5P55010 431 aaKnown RBP17.31■□□□□ 0.36
ZKSCAN1-204ENST00000482979 MBIPQ9NS73 344 aa17.31■□□□□ 0.36
ZKSCAN1-204ENST00000482979 CARMIL3Q8ND23 1372 aa17.31■□□□□ 0.36
ZKSCAN1-204ENST00000482979 KCNQ3O43525 872 aa17.3■□□□□ 0.36
ZKSCAN1-204ENST00000482979 CENPBP07199 599 aaPredicted RBP17.3■□□□□ 0.36
ZKSCAN1-204ENST00000482979 HSPA6P17066 643 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms