RNA–Protein interactions for RNA: ENST00000482863.1

PCOLCE-206, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-206ENST00000482863 NFIXQ14938 502 aa21.1■□□□□ 0.97
PCOLCE-206ENST00000482863 VIRMAQ69YN4 1812 aaKnown RBP21.1■□□□□ 0.97
PCOLCE-206ENST00000482863 COL15A1P39059 1388 aa21.1■□□□□ 0.97
PCOLCE-206ENST00000482863 KCNQ3O43525 872 aa21.09■□□□□ 0.97
PCOLCE-206ENST00000482863 ZNF496Q96IT1 587 aaPredicted RBP21.09■□□□□ 0.97
PCOLCE-206ENST00000482863 PIM2Q9P1W9 311 aa21.09■□□□□ 0.97
PCOLCE-206ENST00000482863 NARFQ9UHQ1 456 aa21.09■□□□□ 0.97
PCOLCE-206ENST00000482863 GNAT3A8MTJ3 354 aa21.08■□□□□ 0.97
PCOLCE-206ENST00000482863 PRKAR2BP31323 418 aa21.07■□□□□ 0.96
PCOLCE-206ENST00000482863 TTC5Q8N0Z6 440 aa21.07■□□□□ 0.96
PCOLCE-206ENST00000482863 VSIG10Q8N0Z9 540 aa21.07■□□□□ 0.96
PCOLCE-206ENST00000482863 TEFQ10587 303 aa21.06■□□□□ 0.96
PCOLCE-206ENST00000482863 DALRD3Q5D0E6 543 aaKnown RBP21.06■□□□□ 0.96
PCOLCE-206ENST00000482863 C9orf131Q5VYM1 1079 aa21.06■□□□□ 0.96
PCOLCE-206ENST00000482863 BICDL1Q6ZP65 573 aa21.06■□□□□ 0.96
PCOLCE-206ENST00000482863 GAS2L2Q8NHY3 880 aa21.06■□□□□ 0.96
PCOLCE-206ENST00000482863 RSPH6AQ9H0K4 717 aa21.06■□□□□ 0.96
PCOLCE-206ENST00000482863 BRCA1P38398 1863 aaKnown RBP21.05■□□□□ 0.96
PCOLCE-206ENST00000482863 ZNF790Q6PG37 636 aa21.05■□□□□ 0.96
PCOLCE-206ENST00000482863 CEP350Q5VT06 3117 aa21.04■□□□□ 0.96
PCOLCE-206ENST00000482863 SERPINB2P05120 415 aa21.04■□□□□ 0.96
PCOLCE-206ENST00000482863 PPP2R1AP30153 589 aa21.04■□□□□ 0.96
PCOLCE-206ENST00000482863 NMRK2Q9NPI5 230 aa21.04■□□□□ 0.96
PCOLCE-206ENST00000482863 ZNF330Q9Y3S2 320 aaPredicted RBP21.04■□□□□ 0.96
PCOLCE-206ENST00000482863 UBR2Q8IWV8 1755 aa21.03■□□□□ 0.96
PCOLCE-206ENST00000482863 CARMIL3Q8ND23 1372 aa21.03■□□□□ 0.96
PCOLCE-206ENST00000482863 HEG1Q9ULI3 1381 aa21.03■□□□□ 0.96
PCOLCE-206ENST00000482863 A1BGP04217 495 aa21.03■□□□□ 0.96
PCOLCE-206ENST00000482863 EIF5P55010 431 aaKnown RBP21.03■□□□□ 0.96
PCOLCE-206ENST00000482863 CCDC24Q8N4L8 307 aa21.03■□□□□ 0.96
PCOLCE-206ENST00000482863 STARD3NLO95772 234 aa21.02■□□□□ 0.96
PCOLCE-206ENST00000482863 PIP4K2AP48426 406 aaPredicted RBP21.02■□□□□ 0.96
PCOLCE-206ENST00000482863 TBC1D2BQ9UPU7 963 aa21.02■□□□□ 0.96
PCOLCE-206ENST00000482863 PRAMEF22A3QJZ6 481 aa21.01■□□□□ 0.95
PCOLCE-206ENST00000482863 U2AF1L5P0DN76 240 aaPredicted RBP21.01■□□□□ 0.95
PCOLCE-206ENST00000482863 HSPA6P17066 643 aa21.01■□□□□ 0.95
PCOLCE-206ENST00000482863 U2AF1Q01081 240 aaKnown RBP eCLIP21.01■□□□□ 0.95
PCOLCE-206ENST00000482863 RASSF7Q02833 373 aa21.01■□□□□ 0.95
PCOLCE-206ENST00000482863 TBC1D9BQ66K14 1250 aa21.01■□□□□ 0.95
PCOLCE-206ENST00000482863 CFAP53Q96M91 514 aa21.01■□□□□ 0.95
PCOLCE-206ENST00000482863 CEMIPQ8WUJ3 1361 aa21■□□□□ 0.95
PCOLCE-206ENST00000482863 DCTN1Q14203 1278 aa21■□□□□ 0.95
PCOLCE-206ENST00000482863 MCM10Q7L590 875 aa21■□□□□ 0.95
PCOLCE-206ENST00000482863 RNF181Q9P0P0 153 aa21■□□□□ 0.95
PCOLCE-206ENST00000482863 AFDNP55196 1824 aaKnown RBP20.99■□□□□ 0.95
PCOLCE-206ENST00000482863 BTBD11A6QL63 1104 aa20.99■□□□□ 0.95
PCOLCE-206ENST00000482863 PRELPP51888 382 aa20.99■□□□□ 0.95
PCOLCE-206ENST00000482863 SIPA1L3O60292 1781 aaPredicted RBP20.98■□□□□ 0.95
PCOLCE-206ENST00000482863 C2CD5Q86YS7 1000 aa20.98■□□□□ 0.95
PCOLCE-206ENST00000482863 FMNL2Q96PY5 1086 aa20.98■□□□□ 0.95
PCOLCE-206ENST00000482863 USP16Q9Y5T5 823 aa20.98■□□□□ 0.95
PCOLCE-206ENST00000482863 ARFGEF1Q9Y6D6 1849 aa20.97■□□□□ 0.95
PCOLCE-206ENST00000482863 NUDCQ9Y266 331 aa20.97■□□□□ 0.95
PCOLCE-206ENST00000482863 NRXN2Q9P2S2 1712 aa20.96■□□□□ 0.95
PCOLCE-206ENST00000482863 A0A087WZG4 1122 aa20.95■□□□□ 0.94
PCOLCE-206ENST00000482863 TEX13AQ9BXU3 409 aaPredicted RBP20.95■□□□□ 0.94
PCOLCE-206ENST00000482863 CAMTA2O94983 1202 aa20.94■□□□□ 0.94
PCOLCE-206ENST00000482863 IL6STP40189 918 aaPredicted RBP20.94■□□□□ 0.94
PCOLCE-206ENST00000482863 ZNF219Q9P2Y4 722 aaPredicted RBP20.94■□□□□ 0.94
PCOLCE-206ENST00000482863 TOMM70O94826 608 aa20.93■□□□□ 0.94
PCOLCE-206ENST00000482863 PRR5LQ6MZQ0 368 aa20.93■□□□□ 0.94
PCOLCE-206ENST00000482863 RRAGCQ9HB90 399 aa20.93■□□□□ 0.94
PCOLCE-206ENST00000482863 MIS18AQ9NYP9 233 aa20.93■□□□□ 0.94
PCOLCE-206ENST00000482863 TTLL6Q8N841 843 aa20.92■□□□□ 0.94
PCOLCE-206ENST00000482863 H0YIN7 160 aa20.91■□□□□ 0.94
PCOLCE-206ENST00000482863 DZIP3Q86Y13 1208 aaKnown RBP20.91■□□□□ 0.94
PCOLCE-206ENST00000482863 RTF1Q92541 710 aaKnown RBP20.91■□□□□ 0.94
PCOLCE-206ENST00000482863 ZNF622Q969S3 477 aaKnown RBP eCLIP20.91■□□□□ 0.94
PCOLCE-206ENST00000482863 NFKBIEO00221 500 aa20.89■□□□□ 0.93
PCOLCE-206ENST00000482863 HTRA3P83110 453 aa20.89■□□□□ 0.93
PCOLCE-206ENST00000482863 SCN7AQ01118 1682 aa20.89■□□□□ 0.93
PCOLCE-206ENST00000482863 NBPF26B4DH59 902 aa20.88■□□□□ 0.93
PCOLCE-206ENST00000482863 C21orf2O43822 256 aa20.88■□□□□ 0.93
PCOLCE-206ENST00000482863 NBPF10Q6P3W6 841 aaKnown RBP20.88■□□□□ 0.93
PCOLCE-206ENST00000482863 NBPF15Q8N660 670 aa20.88■□□□□ 0.93
PCOLCE-206ENST00000482863 ANKRD31Q8N7Z5 1873 aa20.88■□□□□ 0.93
PCOLCE-206ENST00000482863 SNRPA1P09661 255 aaKnown RBP20.87■□□□□ 0.93
PCOLCE-206ENST00000482863 SETDB2Q96T68 719 aa20.87■□□□□ 0.93
PCOLCE-206ENST00000482863 BRIP1Q9BX63 1249 aa20.87■□□□□ 0.93
PCOLCE-206ENST00000482863 SBF1O95248 1867 aa20.87■□□□□ 0.93
PCOLCE-206ENST00000482863 LMNB1P20700 586 aa20.86■□□□□ 0.93
PCOLCE-206ENST00000482863 THUMPD2Q9BTF0 503 aaKnown RBP20.86■□□□□ 0.93
PCOLCE-206ENST00000482863 DLEC1Q9Y238 1755 aa20.86■□□□□ 0.93
PCOLCE-206ENST00000482863 KDM2BQ8NHM5 1336 aa20.85■□□□□ 0.93
PCOLCE-206ENST00000482863 NPM2Q86SE8 214 aaKnown RBP20.85■□□□□ 0.93
PCOLCE-206ENST00000482863 C16orf71Q8IYS4 520 aaPredicted RBP20.85■□□□□ 0.93
PCOLCE-206ENST00000482863 COL11A2P13942 1736 aaPredicted RBP20.84■□□□□ 0.93
PCOLCE-206ENST00000482863 FAM177BA6PVY3 158 aa20.84■□□□□ 0.93
PCOLCE-206ENST00000482863 PDE6BP35913 854 aa20.84■□□□□ 0.93
PCOLCE-206ENST00000482863 APLP1P51693 650 aa20.84■□□□□ 0.93
PCOLCE-206ENST00000482863 TAF7Q15545 349 aaPredicted RBP20.84■□□□□ 0.93
PCOLCE-206ENST00000482863 DNAJC5GQ8N7S2 189 aa20.84■□□□□ 0.93
PCOLCE-206ENST00000482863 CNBD1Q8NA66 436 aa20.84■□□□□ 0.93
PCOLCE-206ENST00000482863 RBM46Q8TBY0 533 aaKnown RBP20.84■□□□□ 0.93
PCOLCE-206ENST00000482863 NPHP1O15259 732 aa20.83■□□□□ 0.93
PCOLCE-206ENST00000482863 HTATSF1O43719 755 aaKnown RBP20.83■□□□□ 0.93
PCOLCE-206ENST00000482863 PLEKHF1Q96S99 279 aa20.83■□□□□ 0.93
PCOLCE-206ENST00000482863 HLFQ16534 295 aa20.82■□□□□ 0.92
PCOLCE-206ENST00000482863 NGEFQ8N5V2 710 aa20.82■□□□□ 0.92
PCOLCE-206ENST00000482863 BCORQ6W2J9 1755 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms