RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 SPATA32Q96LK8 384 aa10.26□□□□□ -0.77
TVP23B-203ENST00000482741 PBXIP1Q96AQ6 731 aa10.26□□□□□ -0.77
TVP23B-203ENST00000482741 MINK1Q8N4C8 1332 aaPredicted RBP10.26□□□□□ -0.77
TVP23B-203ENST00000482741 AFDNP55196 1824 aaKnown RBP10.26□□□□□ -0.77
TVP23B-203ENST00000482741 HDGFL1Q5TGJ6 251 aa10.25□□□□□ -0.77
TVP23B-203ENST00000482741 CERKQ8TCT0 537 aa10.25□□□□□ -0.77
TVP23B-203ENST00000482741 DDX12PQ92771 950 aa10.25□□□□□ -0.77
TVP23B-203ENST00000482741 IP6K1Q92551 441 aa10.25□□□□□ -0.77
TVP23B-203ENST00000482741 BCL2L13Q9BXK5 485 aa10.25□□□□□ -0.77
TVP23B-203ENST00000482741 MAST2Q6P0Q8 1798 aa10.25□□□□□ -0.77
TVP23B-203ENST00000482741 ZNF16P17020 682 aaPredicted RBP10.24□□□□□ -0.77
TVP23B-203ENST00000482741 MTMR14Q8NCE2 650 aa10.24□□□□□ -0.77
TVP23B-203ENST00000482741 ZNF335Q9H4Z2 1342 aaPredicted RBP10.24□□□□□ -0.77
TVP23B-203ENST00000482741 ZNF853P0CG23 659 aa10.24□□□□□ -0.77
TVP23B-203ENST00000482741 IGSF5Q9NSI5 407 aa10.24□□□□□ -0.77
TVP23B-203ENST00000482741 LMOD1P29536 600 aaPredicted RBP10.24□□□□□ -0.77
TVP23B-203ENST00000482741 DOCK2Q92608 1830 aa10.23□□□□□ -0.77
TVP23B-203ENST00000482741 OXER1Q8TDS5 423 aa10.23□□□□□ -0.77
TVP23B-203ENST00000482741 MEGF6O75095 1541 aa10.23□□□□□ -0.77
TVP23B-203ENST00000482741 NUP98P52948 1817 aa10.22□□□□□ -0.77
TVP23B-203ENST00000482741 PEX14O75381 377 aa10.22□□□□□ -0.77
TVP23B-203ENST00000482741 CDCA7Q9BWT1 371 aaPredicted RBP10.22□□□□□ -0.77
TVP23B-203ENST00000482741 PANK3Q9H999 370 aa10.22□□□□□ -0.77
TVP23B-203ENST00000482741 GNPATO15228 680 aa10.22□□□□□ -0.77
TVP23B-203ENST00000482741 FBXO22Q8NEZ5 403 aa10.22□□□□□ -0.77
TVP23B-203ENST00000482741 PHOX2BQ99453 314 aa10.22□□□□□ -0.77
TVP23B-203ENST00000482741 KCNA1Q09470 495 aa10.22□□□□□ -0.77
TVP23B-203ENST00000482741 TMEM132EQ6IEE7 984 aa10.22□□□□□ -0.77
TVP23B-203ENST00000482741 MAP3K5Q99683 1374 aa10.21□□□□□ -0.77
TVP23B-203ENST00000482741 PDE4AP27815 886 aa10.21□□□□□ -0.77
TVP23B-203ENST00000482741 NOM1Q5C9Z4 860 aaKnown RBP10.21□□□□□ -0.77
TVP23B-203ENST00000482741 SGIP1Q9BQI5 828 aa10.21□□□□□ -0.77
TVP23B-203ENST00000482741 ARFGEF1Q9Y6D6 1849 aa10.21□□□□□ -0.77
TVP23B-203ENST00000482741 ERICH6BQ5W0A0 696 aa10.21□□□□□ -0.78
TVP23B-203ENST00000482741 RAB11FIP3O75154 756 aa10.2□□□□□ -0.78
TVP23B-203ENST00000482741 FCHSD2O94868 740 aa10.2□□□□□ -0.78
TVP23B-203ENST00000482741 NEUROD1Q13562 356 aa10.2□□□□□ -0.78
TVP23B-203ENST00000482741 RGL3Q3MIN7 710 aa10.2□□□□□ -0.78
TVP23B-203ENST00000482741 MICAL1Q8TDZ2 1067 aa10.2□□□□□ -0.78
TVP23B-203ENST00000482741 PNNQ9H307 717 aaKnown RBP10.2□□□□□ -0.78
TVP23B-203ENST00000482741 SLAIN2Q9P270 581 aa10.2□□□□□ -0.78
TVP23B-203ENST00000482741 POLKQ9UBT6 870 aa10.2□□□□□ -0.78
TVP23B-203ENST00000482741 PSEN1P49768 467 aa10.2□□□□□ -0.78
TVP23B-203ENST00000482741 WAPLQ7Z5K2 1190 aa10.2□□□□□ -0.78
TVP23B-203ENST00000482741 VRTNQ9H8Y1 702 aa10.2□□□□□ -0.78
TVP23B-203ENST00000482741 ZBTB12Q9Y330 459 aaPredicted RBP10.2□□□□□ -0.78
TVP23B-203ENST00000482741 PDAP1Q13442 181 aaKnown RBP10.2□□□□□ -0.78
TVP23B-203ENST00000482741 DRC1Q96MC2 740 aa10.2□□□□□ -0.78
TVP23B-203ENST00000482741 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.2□□□□□ -0.78
TVP23B-203ENST00000482741 KDM6AO15550 1401 aaPredicted RBP10.2□□□□□ -0.78
TVP23B-203ENST00000482741 TSNAXIP1Q2TAA8 658 aa10.19□□□□□ -0.78
TVP23B-203ENST00000482741 WDR63Q8IWG1 891 aa10.19□□□□□ -0.78
TVP23B-203ENST00000482741 TRAK1Q9UPV9 953 aa10.19□□□□□ -0.78
TVP23B-203ENST00000482741 HOXB7P09629 217 aa10.19□□□□□ -0.78
TVP23B-203ENST00000482741 SERPINB4P48594 390 aa10.19□□□□□ -0.78
TVP23B-203ENST00000482741 MNX1P50219 401 aaPredicted RBP10.18□□□□□ -0.78
TVP23B-203ENST00000482741 AAMPQ13685 434 aa10.18□□□□□ -0.78
TVP23B-203ENST00000482741 SH3D19Q5HYK7 790 aa10.18□□□□□ -0.78
TVP23B-203ENST00000482741 SREK1Q8WXA9 508 aaKnown RBP10.18□□□□□ -0.78
TVP23B-203ENST00000482741 GOPCQ9HD26 462 aa10.18□□□□□ -0.78
TVP23B-203ENST00000482741 FOCADQ5VW36 1801 aa10.18□□□□□ -0.78
TVP23B-203ENST00000482741 RFC5P40937 340 aa10.18□□□□□ -0.78
TVP23B-203ENST00000482741 CRISPLD2Q9H0B8 497 aa10.18□□□□□ -0.78
TVP23B-203ENST00000482741 MLECQ14165 292 aa10.17□□□□□ -0.78
TVP23B-203ENST00000482741 WDR17Q8IZU2 1322 aa10.17□□□□□ -0.78
TVP23B-203ENST00000482741 ANKRD13AQ8IZ07 590 aa10.17□□□□□ -0.78
TVP23B-203ENST00000482741 UPF1Q92900 1129 aaKnown RBP eCLIP10.17□□□□□ -0.78
TVP23B-203ENST00000482741 KLHL42Q9P2K6 505 aa10.17□□□□□ -0.78
TVP23B-203ENST00000482741 RBM27Q9P2N5 1060 aaKnown RBP10.17□□□□□ -0.78
TVP23B-203ENST00000482741 SPDYE5A6NIY4 337 aa10.16□□□□□ -0.78
TVP23B-203ENST00000482741 VAC14Q08AM6 782 aa10.16□□□□□ -0.78
TVP23B-203ENST00000482741 TICAM2Q86XR7 235 aa10.16□□□□□ -0.78
TVP23B-203ENST00000482741 HIRIP3Q9BW71 556 aaPredicted RBP10.16□□□□□ -0.78
TVP23B-203ENST00000482741 HMGB2P26583 209 aaKnown RBP10.15□□□□□ -0.78
TVP23B-203ENST00000482741 HOXC9P31274 260 aa10.15□□□□□ -0.78
TVP23B-203ENST00000482741 NAALADL2Q58DX5 795 aa10.15□□□□□ -0.78
TVP23B-203ENST00000482741 CABP1Q9NZU7 370 aa10.15□□□□□ -0.78
TVP23B-203ENST00000482741 CARD10Q9BWT7 1032 aa10.15□□□□□ -0.78
TVP23B-203ENST00000482741 BIN2Q9UBW5 565 aaPredicted RBP10.15□□□□□ -0.78
TVP23B-203ENST00000482741 ZNF609O15014 1411 aa10.14□□□□□ -0.79
TVP23B-203ENST00000482741 SSTR3P32745 418 aaPredicted RBP10.14□□□□□ -0.79
TVP23B-203ENST00000482741 LRRC59Q96AG4 307 aaKnown RBP10.14□□□□□ -0.79
TVP23B-203ENST00000482741 ERBB4Q15303 1308 aa10.14□□□□□ -0.79
TVP23B-203ENST00000482741 RBM47A0AV96 593 aaKnown RBP10.13□□□□□ -0.79
TVP23B-203ENST00000482741 PPP1R15BQ5SWA1 713 aa10.13□□□□□ -0.79
TVP23B-203ENST00000482741 MYSM1Q5VVJ2 828 aa10.13□□□□□ -0.79
TVP23B-203ENST00000482741 POGKQ9P215 609 aa10.13□□□□□ -0.79
TVP23B-203ENST00000482741 FARP1Q9Y4F1 1045 aaPredicted RBP10.13□□□□□ -0.79
TVP23B-203ENST00000482741 ECM29Q5VYK3 1845 aa10.13□□□□□ -0.79
TVP23B-203ENST00000482741 ANKRD31Q8N7Z5 1873 aa10.13□□□□□ -0.79
TVP23B-203ENST00000482741 NEFLP07196 543 aa10.13□□□□□ -0.79
TVP23B-203ENST00000482741 VPS72Q15906 364 aa10.13□□□□□ -0.79
TVP23B-203ENST00000482741 SPATA31A5Q5VU36 1347 aa10.13□□□□□ -0.79
TVP23B-203ENST00000482741 SPATA31A7Q8IWB4 1347 aa10.13□□□□□ -0.79
TVP23B-203ENST00000482741 PAPPA2Q9BXP8 1791 aa10.13□□□□□ -0.79
TVP23B-203ENST00000482741 SLC12A5Q9H2X9 1139 aa10.13□□□□□ -0.79
TVP23B-203ENST00000482741 TNRC6CQ9HCJ0 1690 aaKnown RBP10.12□□□□□ -0.79
TVP23B-203ENST00000482741 CHRM1P11229 460 aaPredicted RBP10.12□□□□□ -0.79
TVP23B-203ENST00000482741 STK32AQ8WU08 396 aa10.12□□□□□ -0.79
TVP23B-203ENST00000482741 SLC26A8Q96RN1 970 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms