RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 FKBP8Q14318 412 aa20.36■□□□□ 0.85
EXOSC3-205ENST00000482614 PLEKHF1Q96S99 279 aa20.36■□□□□ 0.85
EXOSC3-205ENST00000482614 COL15A1P39059 1388 aa20.35■□□□□ 0.85
EXOSC3-205ENST00000482614 MYBBP1AQ9BQG0 1328 aaKnown RBP20.35■□□□□ 0.85
EXOSC3-205ENST00000482614 KIF13BQ9NQT8 1826 aa20.35■□□□□ 0.85
EXOSC3-205ENST00000482614 NARFQ9UHQ1 456 aa20.35■□□□□ 0.85
EXOSC3-205ENST00000482614 UTRNP46939 3433 aa20.34■□□□□ 0.85
EXOSC3-205ENST00000482614 CANXP27824 592 aaKnown RBP20.34■□□□□ 0.85
EXOSC3-205ENST00000482614 TGFB2P61812 414 aa20.34■□□□□ 0.85
EXOSC3-205ENST00000482614 DCTN1Q14203 1278 aa20.34■□□□□ 0.85
EXOSC3-205ENST00000482614 USPL1Q5W0Q7 1092 aa20.34■□□□□ 0.85
EXOSC3-205ENST00000482614 DLG5Q8TDM6 1919 aa20.33■□□□□ 0.85
EXOSC3-205ENST00000482614 MAPK8IP3Q9UPT6 1336 aa20.33■□□□□ 0.85
EXOSC3-205ENST00000482614 KCNQ3O43525 872 aa20.33■□□□□ 0.85
EXOSC3-205ENST00000482614 A0A087WZG4 1122 aa20.32■□□□□ 0.84
EXOSC3-205ENST00000482614 TM4SF1P30408 202 aa20.32■□□□□ 0.84
EXOSC3-205ENST00000482614 EIF5P55010 431 aaKnown RBP20.32■□□□□ 0.84
EXOSC3-205ENST00000482614 TAF7Q15545 349 aaPredicted RBP20.32■□□□□ 0.84
EXOSC3-205ENST00000482614 NFE2L2Q16236 605 aa20.32■□□□□ 0.84
EXOSC3-205ENST00000482614 C10orf71Q711Q0 1435 aa20.32■□□□□ 0.84
EXOSC3-205ENST00000482614 IL6STP40189 918 aaPredicted RBP20.3■□□□□ 0.84
EXOSC3-205ENST00000482614 DDR1Q08345 913 aa20.3■□□□□ 0.84
EXOSC3-205ENST00000482614 SNRPA1P09661 255 aaKnown RBP20.29■□□□□ 0.84
EXOSC3-205ENST00000482614 ZNF784Q8NCA9 323 aaPredicted RBP20.29■□□□□ 0.84
EXOSC3-205ENST00000482614 PXDNLA1KZ92 1463 aa20.29■□□□□ 0.84
EXOSC3-205ENST00000482614 N4BP2Q86UW6 1770 aaPredicted RBP20.29■□□□□ 0.84
EXOSC3-205ENST00000482614 KIAA1551Q9HCM1 1747 aa20.28■□□□□ 0.84
EXOSC3-205ENST00000482614 POLRMTO00411 1230 aaKnown RBP20.28■□□□□ 0.84
EXOSC3-205ENST00000482614 A1BGP04217 495 aa20.28■□□□□ 0.84
EXOSC3-205ENST00000482614 NPM2Q86SE8 214 aaKnown RBP20.28■□□□□ 0.84
EXOSC3-205ENST00000482614 PNISRQ8TF01 805 aaKnown RBP20.28■□□□□ 0.84
EXOSC3-205ENST00000482614 BCL2L12Q9HB09 334 aa20.28■□□□□ 0.84
EXOSC3-205ENST00000482614 A0A0G2JLW4 131 aa20.27■□□□□ 0.84
EXOSC3-205ENST00000482614 WWC3Q9ULE0 1092 aa20.27■□□□□ 0.84
EXOSC3-205ENST00000482614 USP16Q9Y5T5 823 aa20.27■□□□□ 0.84
EXOSC3-205ENST00000482614 DPEP1P16444 411 aa20.26■□□□□ 0.83
EXOSC3-205ENST00000482614 NFIXQ14938 502 aa20.26■□□□□ 0.83
EXOSC3-205ENST00000482614 PRKRIP1Q9H875 184 aaPredicted RBP20.26■□□□□ 0.83
EXOSC3-205ENST00000482614 ZNF330Q9Y3S2 320 aaPredicted RBP20.26■□□□□ 0.83
EXOSC3-205ENST00000482614 GOLGB1Q14789 3259 aaKnown RBP20.26■□□□□ 0.83
EXOSC3-205ENST00000482614 MIS18AQ9NYP9 233 aa20.25■□□□□ 0.83
EXOSC3-205ENST00000482614 PRAMEF22A3QJZ6 481 aa20.24■□□□□ 0.83
EXOSC3-205ENST00000482614 TBC1D2BQ9UPU7 963 aa20.24■□□□□ 0.83
EXOSC3-205ENST00000482614 AFDNP55196 1824 aaKnown RBP20.23■□□□□ 0.83
EXOSC3-205ENST00000482614 SERPINB2P05120 415 aa20.23■□□□□ 0.83
EXOSC3-205ENST00000482614 RIPK4P57078 832 aa20.23■□□□□ 0.83
EXOSC3-205ENST00000482614 WDR43Q15061 677 aaKnown RBP eCLIP20.23■□□□□ 0.83
EXOSC3-205ENST00000482614 BCS1LQ9Y276 419 aa20.23■□□□□ 0.83
EXOSC3-205ENST00000482614 KDM3BQ7LBC6 1761 aa20.23■□□□□ 0.83
EXOSC3-205ENST00000482614 PIM2Q9P1W9 311 aa20.22■□□□□ 0.83
EXOSC3-205ENST00000482614 NRXN2Q9P2S2 1712 aa20.22■□□□□ 0.83
EXOSC3-205ENST00000482614 KCNA3P22001 575 aa20.21■□□□□ 0.83
EXOSC3-205ENST00000482614 TMPOP42166 694 aaKnown RBP20.21■□□□□ 0.83
EXOSC3-205ENST00000482614 LMOD3Q0VAK6 560 aa20.21■□□□□ 0.83
EXOSC3-205ENST00000482614 BICDL1Q6ZP65 573 aa20.21■□□□□ 0.83
EXOSC3-205ENST00000482614 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
EXOSC3-205ENST00000482614 THUMPD2Q9BTF0 503 aaKnown RBP20.21■□□□□ 0.83
EXOSC3-205ENST00000482614 SCN7AQ01118 1682 aa20.21■□□□□ 0.83
EXOSC3-205ENST00000482614 BRCA1P38398 1863 aaKnown RBP20.21■□□□□ 0.83
EXOSC3-205ENST00000482614 TBC1D9BQ66K14 1250 aa20.2■□□□□ 0.82
EXOSC3-205ENST00000482614 CAMTA2O94983 1202 aa20.19■□□□□ 0.82
EXOSC3-205ENST00000482614 PIP4K2AP48426 406 aaPredicted RBP20.19■□□□□ 0.82
EXOSC3-205ENST00000482614 EIF4A1P60842 406 aaKnown RBP20.19■□□□□ 0.82
EXOSC3-205ENST00000482614 RUNDC1Q96C34 613 aa20.19■□□□□ 0.82
EXOSC3-205ENST00000482614 CCDC146Q8IYE0 955 aa20.18■□□□□ 0.82
EXOSC3-205ENST00000482614 LAMB4A4D0S4 1761 aa20.18■□□□□ 0.82
EXOSC3-205ENST00000482614 BCORQ6W2J9 1755 aa20.17■□□□□ 0.82
EXOSC3-205ENST00000482614 NBPF26B4DH59 902 aa20.17■□□□□ 0.82
EXOSC3-205ENST00000482614 GIGYF1O75420 1035 aaPredicted RBP20.17■□□□□ 0.82
EXOSC3-205ENST00000482614 CHRNA5P30532 468 aa20.17■□□□□ 0.82
EXOSC3-205ENST00000482614 DALRD3Q5D0E6 543 aaKnown RBP20.17■□□□□ 0.82
EXOSC3-205ENST00000482614 NBPF10Q6P3W6 841 aaKnown RBP20.17■□□□□ 0.82
EXOSC3-205ENST00000482614 NBPF15Q8N660 670 aa20.17■□□□□ 0.82
EXOSC3-205ENST00000482614 SETDB2Q96T68 719 aa20.17■□□□□ 0.82
EXOSC3-205ENST00000482614 BABAM1Q9NWV8 329 aa20.17■□□□□ 0.82
EXOSC3-205ENST00000482614 ADAMTS8Q9UP79 889 aa20.17■□□□□ 0.82
EXOSC3-205ENST00000482614 ARFGEF1Q9Y6D6 1849 aa20.16■□□□□ 0.82
EXOSC3-205ENST00000482614 CLEC4GQ6UXB4 293 aa20.16■□□□□ 0.82
EXOSC3-205ENST00000482614 TSPYL4Q9UJ04 414 aa20.16■□□□□ 0.82
EXOSC3-205ENST00000482614 CARMIL3Q8ND23 1372 aa20.16■□□□□ 0.82
EXOSC3-205ENST00000482614 NEUROD2Q15784 382 aa20.15■□□□□ 0.82
EXOSC3-205ENST00000482614 ARHGAP27Q6ZUM4 889 aa20.15■□□□□ 0.82
EXOSC3-205ENST00000482614 ZNF652Q9Y2D9 606 aa20.15■□□□□ 0.82
EXOSC3-205ENST00000482614 RRP7AQ9Y3A4 280 aaKnown RBP20.15■□□□□ 0.82
EXOSC3-205ENST00000482614 RGL2O15211 777 aa20.14■□□□□ 0.81
EXOSC3-205ENST00000482614 PDZRN3Q9UPQ7 1066 aa20.13■□□□□ 0.81
EXOSC3-205ENST00000482614 ATP10DQ9P241 1426 aa20.12■□□□□ 0.81
EXOSC3-205ENST00000482614 ADCY9O60503 1353 aa20.12■□□□□ 0.81
EXOSC3-205ENST00000482614 ZNF316A6NFI3 1004 aaPredicted RBP20.12■□□□□ 0.81
EXOSC3-205ENST00000482614 H0YIN7 160 aa20.12■□□□□ 0.81
EXOSC3-205ENST00000482614 PRR5LQ6MZQ0 368 aa20.12■□□□□ 0.81
EXOSC3-205ENST00000482614 C2CD5Q86YS7 1000 aa20.12■□□□□ 0.81
EXOSC3-205ENST00000482614 BRIP1Q9BX63 1249 aa20.12■□□□□ 0.81
EXOSC3-205ENST00000482614 DLEC1Q9Y238 1755 aa20.11■□□□□ 0.81
EXOSC3-205ENST00000482614 NPHP1O15259 732 aa20.11■□□□□ 0.81
EXOSC3-205ENST00000482614 PDE6BP35913 854 aa20.11■□□□□ 0.81
EXOSC3-205ENST00000482614 CNBD1Q8NA66 436 aa20.1■□□□□ 0.81
EXOSC3-205ENST00000482614 TRIM35Q9UPQ4 493 aa20.1■□□□□ 0.81
EXOSC3-205ENST00000482614 ERBB4Q15303 1308 aa20.09■□□□□ 0.81
EXOSC3-205ENST00000482614 ST5P78524 1137 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms