RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 PLCH2O75038 1416 aa10.57□□□□□ -0.72
SNX13-208ENST00000482558 QPCTQ16769 361 aa10.56□□□□□ -0.72
SNX13-208ENST00000482558 PPP2R2DQ66LE6 453 aa10.56□□□□□ -0.72
SNX13-208ENST00000482558 VASH1Q7L8A9 365 aaPredicted RBP10.56□□□□□ -0.72
SNX13-208ENST00000482558 SH3BP5LQ7L8J4 393 aa10.56□□□□□ -0.72
SNX13-208ENST00000482558 PROSER2Q86WR7 435 aaPredicted RBP10.56□□□□□ -0.72
SNX13-208ENST00000482558 CCDC116Q8IYX3 515 aa10.56□□□□□ -0.72
SNX13-208ENST00000482558 UHRF1BP1Q6BDS2 1440 aa10.56□□□□□ -0.72
SNX13-208ENST00000482558 HSPA5P11021 654 aaKnown RBP10.55□□□□□ -0.72
SNX13-208ENST00000482558 HNRNPMP52272 730 aaKnown RBP eCLIP10.55□□□□□ -0.728e-7■■■■■ 42.1
SNX13-208ENST00000482558 CABLES1Q8TDN4 633 aa10.55□□□□□ -0.72
SNX13-208ENST00000482558 DUOX2Q9NRD8 1548 aa10.54□□□□□ -0.72
SNX13-208ENST00000482558 NUTM2BA6NNL0 878 aaPredicted RBP10.54□□□□□ -0.72
SNX13-208ENST00000482558 NUTM2EB1AL46 878 aaPredicted RBP10.54□□□□□ -0.72
SNX13-208ENST00000482558 PATL2C9JE40 543 aaKnown RBP10.54□□□□□ -0.72
SNX13-208ENST00000482558 NUTM2DQ5VT03 806 aaPredicted RBP10.54□□□□□ -0.72
SNX13-208ENST00000482558 NUTM2AQ8IVF1 878 aaPredicted RBP10.54□□□□□ -0.72
SNX13-208ENST00000482558 GPKOWQ92917 476 aaPredicted RBP eCLIP10.54□□□□□ -0.72
SNX13-208ENST00000482558 ERBINQ96RT1 1412 aa10.54□□□□□ -0.72
SNX13-208ENST00000482558 COL25A1Q9BXS0 654 aaPredicted RBP10.54□□□□□ -0.72
SNX13-208ENST00000482558 ZCCHC11Q5TAX3 1644 aaKnown RBP10.54□□□□□ -0.72
SNX13-208ENST00000482558 UNC13BO14795 1591 aa10.53□□□□□ -0.72
SNX13-208ENST00000482558 TTC37Q6PGP7 1564 aa10.53□□□□□ -0.72
SNX13-208ENST00000482558 RTEL1-TNFRSF6BF6WH68 1400 aa10.53□□□□□ -0.72
SNX13-208ENST00000482558 LILRB3O75022 631 aa10.53□□□□□ -0.72
SNX13-208ENST00000482558 TMEM259Q4ZIN3 620 aa10.53□□□□□ -0.72
SNX13-208ENST00000482558 FBXO31Q5XUX0 539 aaPredicted RBP10.53□□□□□ -0.72
SNX13-208ENST00000482558 ZNF385CQ66K41 422 aaPredicted RBP10.53□□□□□ -0.72
SNX13-208ENST00000482558 SPATA31E1Q6ZUB1 1445 aa10.52□□□□□ -0.73
SNX13-208ENST00000482558 SPINT1O43278 529 aa10.52□□□□□ -0.73
SNX13-208ENST00000482558 Q6ZVU0 165 aa10.52□□□□□ -0.73
SNX13-208ENST00000482558 CCDC155Q8N6L0 562 aa10.52□□□□□ -0.73
SNX13-208ENST00000482558 POLR1AO95602 1720 aaPredicted RBP10.52□□□□□ -0.73
SNX13-208ENST00000482558 SYCP2Q9BX26 1530 aa10.52□□□□□ -0.73
SNX13-208ENST00000482558 CNTLNQ9NXG0 1405 aa10.51□□□□□ -0.73
SNX13-208ENST00000482558 SLURP2P0DP57 97 aa10.51□□□□□ -0.73
SNX13-208ENST00000482558 PDE4CQ08493 712 aa10.51□□□□□ -0.73
SNX13-208ENST00000482558 BANK1Q8NDB2 785 aa10.51□□□□□ -0.73
SNX13-208ENST00000482558 PGPEP1Q9NXJ5 209 aa10.51□□□□□ -0.73
SNX13-208ENST00000482558 DNMT3AQ9Y6K1 912 aaPredicted RBP10.51□□□□□ -0.73
SNX13-208ENST00000482558 FAM135AQ9P2D6 1515 aa10.51□□□□□ -0.73
SNX13-208ENST00000482558 ERCC6L2Q5T890 1561 aa10.51□□□□□ -0.73
SNX13-208ENST00000482558 ROCK2O75116 1388 aaKnown RBP10.51□□□□□ -0.73
SNX13-208ENST00000482558 CCDC7Q96M83 1385 aa10.51□□□□□ -0.73
SNX13-208ENST00000482558 ATP10AO60312 1499 aa10.5□□□□□ -0.73
SNX13-208ENST00000482558 IGHA1P01876 353 aa10.5□□□□□ -0.73
SNX13-208ENST00000482558 IRF5Q13568 498 aa10.5□□□□□ -0.73
SNX13-208ENST00000482558 USP35Q9P2H5 1018 aa10.5□□□□□ -0.73
SNX13-208ENST00000482558 WASHC2AQ641Q2 1341 aa10.5□□□□□ -0.73
SNX13-208ENST00000482558 RALGAPBQ86X10 1494 aa10.49□□□□□ -0.73
SNX13-208ENST00000482558 WDR7Q9Y4E6 1490 aa10.49□□□□□ -0.73
SNX13-208ENST00000482558 ABCC1P33527 1531 aa10.49□□□□□ -0.73
SNX13-208ENST00000482558 IQGAP3Q86VI3 1631 aa10.49□□□□□ -0.73
SNX13-208ENST00000482558 MAGEB6P1A0A0J9YX57 407 aa10.49□□□□□ -0.73
SNX13-208ENST00000482558 SLC35F4A4IF30 521 aa10.49□□□□□ -0.73
SNX13-208ENST00000482558 SVOPQ8N4V2 548 aa10.49□□□□□ -0.73
SNX13-208ENST00000482558 HELBQ8NG08 1087 aaPredicted RBP10.49□□□□□ -0.73
SNX13-208ENST00000482558 MAGI2Q86UL8 1455 aa10.49□□□□□ -0.73
SNX13-208ENST00000482558 AP1G2O75843 785 aa10.48□□□□□ -0.73
SNX13-208ENST00000482558 NBPF8Q3BBV2 869 aa10.48□□□□□ -0.73
SNX13-208ENST00000482558 RTL5Q5HYW3 569 aaPredicted RBP10.48□□□□□ -0.73
SNX13-208ENST00000482558 RNFT1Q5M7Z0 435 aa10.48□□□□□ -0.73
SNX13-208ENST00000482558 PPP1R26Q5T8A7 1209 aaPredicted RBP10.48□□□□□ -0.73
SNX13-208ENST00000482558 TSC1Q92574 1164 aa10.48□□□□□ -0.73
SNX13-208ENST00000482558 CCDC144AA2RUR9 1427 aa10.48□□□□□ -0.73
SNX13-208ENST00000482558 FIGNL2A6NMB9 653 aa10.47□□□□□ -0.73
SNX13-208ENST00000482558 ARHGEF15O94989 841 aa10.47□□□□□ -0.73
SNX13-208ENST00000482558 ERFEQ4G0M1 354 aa10.47□□□□□ -0.73
SNX13-208ENST00000482558 KANK3Q6NY19 840 aa10.47□□□□□ -0.73
SNX13-208ENST00000482558 HIRIP3Q9BW71 556 aaPredicted RBP10.47□□□□□ -0.73
SNX13-208ENST00000482558 CDV3Q9UKY7 258 aaKnown RBP10.47□□□□□ -0.73
SNX13-208ENST00000482558 ITGA6P23229 1130 aa10.46□□□□□ -0.73
SNX13-208ENST00000482558 FOXK2Q01167 660 aa10.46□□□□□ -0.73
SNX13-208ENST00000482558 CHMP4AQ9BY43 222 aa10.46□□□□□ -0.73
SNX13-208ENST00000482558 ABCA9Q8IUA7 1624 aa10.45□□□□□ -0.74
SNX13-208ENST00000482558 USP47Q96K76 1375 aa10.45□□□□□ -0.74
SNX13-208ENST00000482558 USP17L8P0C7I0 530 aa10.45□□□□□ -0.74
SNX13-208ENST00000482558 FNBP4Q8N3X1 1017 aaPredicted RBP10.45□□□□□ -0.74
SNX13-208ENST00000482558 SNRKQ9NRH2 765 aa10.45□□□□□ -0.74
SNX13-208ENST00000482558 AMOTL2Q9Y2J4 779 aa10.45□□□□□ -0.74
SNX13-208ENST00000482558 KTN1Q86UP2 1357 aaKnown RBP10.44□□□□□ -0.74
SNX13-208ENST00000482558 SPAG9O60271 1321 aaKnown RBP10.44□□□□□ -0.74
SNX13-208ENST00000482558 DHX9Q08211 1270 aaKnown RBP10.44□□□□□ -0.74
SNX13-208ENST00000482558 CBLBQ13191 982 aa10.44□□□□□ -0.74
SNX13-208ENST00000482558 SV2AQ7L0J3 742 aa10.44□□□□□ -0.74
SNX13-208ENST00000482558 CARD14Q9BXL6 1004 aa10.44□□□□□ -0.74
SNX13-208ENST00000482558 IRS1P35568 1242 aa10.43□□□□□ -0.74
SNX13-208ENST00000482558 VWA5B2Q8N398 1253 aa10.43□□□□□ -0.74
SNX13-208ENST00000482558 MTMR14Q8NCE2 650 aa10.43□□□□□ -0.74
SNX13-208ENST00000482558 WHAMMQ8TF30 809 aa10.43□□□□□ -0.74
SNX13-208ENST00000482558 SCARF2Q96GP6 870 aaPredicted RBP10.43□□□□□ -0.74
SNX13-208ENST00000482558 EIF2AK4Q9P2K8 1649 aaKnown RBP10.43□□□□□ -0.74
SNX13-208ENST00000482558 KDM5CP41229 1560 aa10.43□□□□□ -0.74
SNX13-208ENST00000482558 KANK1Q14678 1352 aa10.42□□□□□ -0.74
SNX13-208ENST00000482558 KIF7Q2M1P5 1343 aa10.42□□□□□ -0.74
SNX13-208ENST00000482558 PDXDC2PQ6P474 469 aa10.42□□□□□ -0.74
SNX13-208ENST00000482558 CARD11Q9BXL7 1154 aa10.42□□□□□ -0.74
SNX13-208ENST00000482558 LAMC1P11047 1609 aa10.42□□□□□ -0.74
SNX13-208ENST00000482558 CFAP74Q9C0B2 1584 aa10.42□□□□□ -0.74
SNX13-208ENST00000482558 SOCS7O14512 581 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms