RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 A0A087WZG4 1122 aa26.34■■□□□ 1.81
MSH5-215ENST00000482280 ZEB1P37275 1124 aaPredicted RBP26.34■■□□□ 1.81
MSH5-215ENST00000482280 FKBP8Q14318 412 aa26.34■■□□□ 1.81
MSH5-215ENST00000482280 USPL1Q5W0Q7 1092 aa26.34■■□□□ 1.81
MSH5-215ENST00000482280 ZNF330Q9Y3S2 320 aaPredicted RBP26.34■■□□□ 1.81
MSH5-215ENST00000482280 C4AP0C0L4 1744 aa26.34■■□□□ 1.81
MSH5-215ENST00000482280 WWC3Q9ULE0 1092 aa26.33■■□□□ 1.81
MSH5-215ENST00000482280 NARFQ9UHQ1 456 aa26.32■■□□□ 1.8
MSH5-215ENST00000482280 CHD4Q14839 1912 aa26.31■■□□□ 1.8
MSH5-215ENST00000482280 UBR2Q8IWV8 1755 aa26.31■■□□□ 1.8
MSH5-215ENST00000482280 ZNF784Q8NCA9 323 aaPredicted RBP26.31■■□□□ 1.8
MSH5-215ENST00000482280 MYBBP1AQ9BQG0 1328 aaKnown RBP26.31■■□□□ 1.8
MSH5-215ENST00000482280 DCTN1Q14203 1278 aa26.3■■□□□ 1.8
MSH5-215ENST00000482280 TAF7Q15545 349 aaPredicted RBP26.29■■□□□ 1.8
MSH5-215ENST00000482280 C10orf71Q711Q0 1435 aa26.29■■□□□ 1.8
MSH5-215ENST00000482280 PNISRQ8TF01 805 aaKnown RBP26.28■■□□□ 1.8
MSH5-215ENST00000482280 SIPA1L3O60292 1781 aaPredicted RBP26.28■■□□□ 1.8
MSH5-215ENST00000482280 A0A0G2JLW4 131 aa26.27■■□□□ 1.8
MSH5-215ENST00000482280 SNRPA1P09661 255 aaKnown RBP26.27■■□□□ 1.8
MSH5-215ENST00000482280 NFE2L2Q16236 605 aa26.27■■□□□ 1.8
MSH5-215ENST00000482280 KCNQ3O43525 872 aa26.26■■□□□ 1.79
MSH5-215ENST00000482280 IL6STP40189 918 aaPredicted RBP26.26■■□□□ 1.79
MSH5-215ENST00000482280 BCS1LQ9Y276 419 aa26.26■■□□□ 1.79
MSH5-215ENST00000482280 PXDNLA1KZ92 1463 aa26.25■■□□□ 1.79
MSH5-215ENST00000482280 EIF5P55010 431 aaKnown RBP26.25■■□□□ 1.79
MSH5-215ENST00000482280 DDR1Q08345 913 aa26.25■■□□□ 1.79
MSH5-215ENST00000482280 WDR43Q15061 677 aaKnown RBP eCLIP26.25■■□□□ 1.79
MSH5-215ENST00000482280 PLEKHF1Q96S99 279 aa26.25■■□□□ 1.79
MSH5-215ENST00000482280 POLRMTO00411 1230 aaKnown RBP26.24■■□□□ 1.79
MSH5-215ENST00000482280 TM4SF1P30408 202 aa26.24■■□□□ 1.79
MSH5-215ENST00000482280 DPEP1P16444 411 aa26.23■■□□□ 1.79
MSH5-215ENST00000482280 NFIXQ14938 502 aa26.23■■□□□ 1.79
MSH5-215ENST00000482280 A1BGP04217 495 aa26.22■■□□□ 1.79
MSH5-215ENST00000482280 BICDL1Q6ZP65 573 aa26.22■■□□□ 1.79
MSH5-215ENST00000482280 NPHP1O15259 732 aa26.21■■□□□ 1.79
MSH5-215ENST00000482280 LMOD3Q0VAK6 560 aa26.21■■□□□ 1.79
MSH5-215ENST00000482280 PIM2Q9P1W9 311 aa26.21■■□□□ 1.79
MSH5-215ENST00000482280 TBC1D2BQ9UPU7 963 aa26.21■■□□□ 1.79
MSH5-215ENST00000482280 USP16Q9Y5T5 823 aa26.2■■□□□ 1.78
MSH5-215ENST00000482280 KIF13BQ9NQT8 1826 aa26.19■■□□□ 1.78
MSH5-215ENST00000482280 SERPINB2P05120 415 aa26.19■■□□□ 1.78
MSH5-215ENST00000482280 MIS18AQ9NYP9 233 aa26.19■■□□□ 1.78
MSH5-215ENST00000482280 RIPK4P57078 832 aa26.18■■□□□ 1.78
MSH5-215ENST00000482280 DZIP3Q86Y13 1208 aaKnown RBP26.18■■□□□ 1.78
MSH5-215ENST00000482280 DALRD3Q5D0E6 543 aaKnown RBP26.17■■□□□ 1.78
MSH5-215ENST00000482280 ZNF652Q9Y2D9 606 aa26.17■■□□□ 1.78
MSH5-215ENST00000482280 ARHGAP27Q6ZUM4 889 aa26.16■■□□□ 1.78
MSH5-215ENST00000482280 BCL2L12Q9HB09 334 aa26.16■■□□□ 1.78
MSH5-215ENST00000482280 N4BP2Q86UW6 1770 aaPredicted RBP26.15■■□□□ 1.78
MSH5-215ENST00000482280 SETDB2Q96T68 719 aa26.15■■□□□ 1.78
MSH5-215ENST00000482280 THUMPD2Q9BTF0 503 aaKnown RBP26.15■■□□□ 1.78
MSH5-215ENST00000482280 PRAMEF22A3QJZ6 481 aa26.14■■□□□ 1.78
MSH5-215ENST00000482280 PRKRIP1Q9H875 184 aaPredicted RBP26.14■■□□□ 1.78
MSH5-215ENST00000482280 CARMIL3Q8ND23 1372 aa26.13■■□□□ 1.77
MSH5-215ENST00000482280 GIGYF1O75420 1035 aaPredicted RBP26.13■■□□□ 1.77
MSH5-215ENST00000482280 CHRNA5P30532 468 aa26.13■■□□□ 1.77
MSH5-215ENST00000482280 PIP4K2AP48426 406 aaPredicted RBP26.13■■□□□ 1.77
MSH5-215ENST00000482280 TBC1D9BQ66K14 1250 aa26.13■■□□□ 1.77
MSH5-215ENST00000482280 CCDC146Q8IYE0 955 aa26.12■■□□□ 1.77
MSH5-215ENST00000482280 TSPYL4Q9UJ04 414 aa26.12■■□□□ 1.77
MSH5-215ENST00000482280 TMPOP42166 694 aaKnown RBP26.11■■□□□ 1.77
MSH5-215ENST00000482280 NEUROD2Q15784 382 aa26.11■■□□□ 1.77
MSH5-215ENST00000482280 RUNDC1Q96C34 613 aa26.11■■□□□ 1.77
MSH5-215ENST00000482280 UTRNP46939 3433 aa26.1■■□□□ 1.77
MSH5-215ENST00000482280 DLG5Q8TDM6 1919 aa26.1■■□□□ 1.77
MSH5-215ENST00000482280 H0YIN7 160 aa26.1■■□□□ 1.77
MSH5-215ENST00000482280 CAMTA2O94983 1202 aa26.1■■□□□ 1.77
MSH5-215ENST00000482280 KCNA3P22001 575 aa26.1■■□□□ 1.77
MSH5-215ENST00000482280 GPBP1L1Q9HC44 474 aaPredicted RBP26.1■■□□□ 1.77
MSH5-215ENST00000482280 ATP10DQ9P241 1426 aa26.1■■□□□ 1.77
MSH5-215ENST00000482280 KIAA1551Q9HCM1 1747 aa26.09■■□□□ 1.77
MSH5-215ENST00000482280 EIF4A1P60842 406 aaKnown RBP26.09■■□□□ 1.77
MSH5-215ENST00000482280 ST5P78524 1137 aa26.09■■□□□ 1.77
MSH5-215ENST00000482280 CNBD1Q8NA66 436 aa26.09■■□□□ 1.77
MSH5-215ENST00000482280 PDZRN3Q9UPQ7 1066 aa26.09■■□□□ 1.77
MSH5-215ENST00000482280 SCN7AQ01118 1682 aa26.09■■□□□ 1.77
MSH5-215ENST00000482280 PDE6BP35913 854 aa26.08■■□□□ 1.77
MSH5-215ENST00000482280 CLEC4GQ6UXB4 293 aa26.08■■□□□ 1.77
MSH5-215ENST00000482280 C2CD5Q86YS7 1000 aa26.08■■□□□ 1.77
MSH5-215ENST00000482280 GOLGB1Q14789 3259 aaKnown RBP26.07■■□□□ 1.76
MSH5-215ENST00000482280 ZNF526Q8TF50 670 aaPredicted RBP26.07■■□□□ 1.76
MSH5-215ENST00000482280 RRP7AQ9Y3A4 280 aaKnown RBP26.07■■□□□ 1.76
MSH5-215ENST00000482280 BABAM1Q9NWV8 329 aa26.06■■□□□ 1.76
MSH5-215ENST00000482280 KIF6Q6ZMV9 814 aa26.05■■□□□ 1.76
MSH5-215ENST00000482280 NBPF5PQ86XG9 351 aaPredicted RBP26.05■■□□□ 1.76
MSH5-215ENST00000482280 NGEFQ8N5V2 710 aa26.05■■□□□ 1.76
MSH5-215ENST00000482280 TTLL6Q8N841 843 aa26.05■■□□□ 1.76
MSH5-215ENST00000482280 BRIP1Q9BX63 1249 aa26.05■■□□□ 1.76
MSH5-215ENST00000482280 ADAMTS8Q9UP79 889 aa26.05■■□□□ 1.76
MSH5-215ENST00000482280 NBPF26B4DH59 902 aa26.04■■□□□ 1.76
MSH5-215ENST00000482280 NBPF10Q6P3W6 841 aaKnown RBP26.04■■□□□ 1.76
MSH5-215ENST00000482280 NBPF15Q8N660 670 aa26.04■■□□□ 1.76
MSH5-215ENST00000482280 AFDNP55196 1824 aaKnown RBP26.03■■□□□ 1.76
MSH5-215ENST00000482280 RGL2O15211 777 aa26.03■■□□□ 1.76
MSH5-215ENST00000482280 PRR5LQ6MZQ0 368 aa26.03■■□□□ 1.76
MSH5-215ENST00000482280 NRXN2Q9P2S2 1712 aa26.02■■□□□ 1.76
MSH5-215ENST00000482280 KDM3BQ7LBC6 1761 aa26.02■■□□□ 1.76
MSH5-215ENST00000482280 ZNF622Q969S3 477 aaKnown RBP eCLIP26.02■■□□□ 1.762e-11■■□□□ 11.6
MSH5-215ENST00000482280 NIP7Q9Y221 180 aaKnown RBP eCLIP26.02■■□□□ 1.76
MSH5-215ENST00000482280 LAS1LQ9Y4W2 734 aaKnown RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms