RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 DPEP1P16444 411 aa17.97■□□□□ 0.47
CTDSP1-208ENST00000482272 TM4SF1P30408 202 aa17.97■□□□□ 0.47
CTDSP1-208ENST00000482272 U2AF1Q01081 240 aaKnown RBP eCLIP17.97■□□□□ 0.47
CTDSP1-208ENST00000482272 ZNF790Q6PG37 636 aa17.97■□□□□ 0.47
CTDSP1-208ENST00000482272 NARFQ9UHQ1 456 aa17.97■□□□□ 0.47
CTDSP1-208ENST00000482272 BCS1LQ9Y276 419 aa17.97■□□□□ 0.47
CTDSP1-208ENST00000482272 ZBTB1Q9Y2K1 713 aa17.97■□□□□ 0.47
CTDSP1-208ENST00000482272 AFDNP55196 1824 aaKnown RBP17.97■□□□□ 0.47
CTDSP1-208ENST00000482272 DLG5Q8TDM6 1919 aa17.96■□□□□ 0.47
CTDSP1-208ENST00000482272 FCHSD2O94868 740 aa17.96■□□□□ 0.47
CTDSP1-208ENST00000482272 CANXP27824 592 aaKnown RBP17.96■□□□□ 0.47
CTDSP1-208ENST00000482272 DDR1Q08345 913 aa17.96■□□□□ 0.47
CTDSP1-208ENST00000482272 NRXN2Q9P2S2 1712 aa17.95■□□□□ 0.46
CTDSP1-208ENST00000482272 KCNQ3O43525 872 aa17.95■□□□□ 0.46
CTDSP1-208ENST00000482272 ZNF496Q96IT1 587 aaPredicted RBP17.95■□□□□ 0.46
CTDSP1-208ENST00000482272 GPBP1L1Q9HC44 474 aaPredicted RBP17.95■□□□□ 0.46
CTDSP1-208ENST00000482272 COL15A1P39059 1388 aa17.94■□□□□ 0.46
CTDSP1-208ENST00000482272 A0A087WZG4 1122 aa17.94■□□□□ 0.46
CTDSP1-208ENST00000482272 BTBD11A6QL63 1104 aa17.94■□□□□ 0.46
CTDSP1-208ENST00000482272 RTF1Q92541 710 aaKnown RBP17.94■□□□□ 0.46
CTDSP1-208ENST00000482272 PIM2Q9P1W9 311 aa17.94■□□□□ 0.46
CTDSP1-208ENST00000482272 ATP10DQ9P241 1426 aa17.94■□□□□ 0.46
CTDSP1-208ENST00000482272 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
CTDSP1-208ENST00000482272 POLRMTO00411 1230 aaKnown RBP17.93■□□□□ 0.46
CTDSP1-208ENST00000482272 ARHGAP27Q6ZUM4 889 aa17.93■□□□□ 0.46
CTDSP1-208ENST00000482272 FMNL2Q96PY5 1086 aa17.93■□□□□ 0.46
CTDSP1-208ENST00000482272 BCL2L12Q9HB09 334 aa17.93■□□□□ 0.46
CTDSP1-208ENST00000482272 ADCY9O60503 1353 aa17.92■□□□□ 0.46
CTDSP1-208ENST00000482272 HEG1Q9ULI3 1381 aa17.92■□□□□ 0.46
CTDSP1-208ENST00000482272 KCNA3P22001 575 aa17.92■□□□□ 0.46
CTDSP1-208ENST00000482272 NPM2Q86SE8 214 aaKnown RBP17.92■□□□□ 0.46
CTDSP1-208ENST00000482272 SENP3-EIF4A1A0A087X0R7 540 aa17.91■□□□□ 0.46
CTDSP1-208ENST00000482272 NEFMP07197 916 aa17.91■□□□□ 0.46
CTDSP1-208ENST00000482272 EIF5P55010 431 aaKnown RBP17.91■□□□□ 0.46
CTDSP1-208ENST00000482272 DCTN1Q14203 1278 aa17.91■□□□□ 0.46
CTDSP1-208ENST00000482272 NFIXQ14938 502 aa17.91■□□□□ 0.46
CTDSP1-208ENST00000482272 DALRD3Q5D0E6 543 aaKnown RBP17.9■□□□□ 0.46
CTDSP1-208ENST00000482272 MCM10Q7L590 875 aa17.9■□□□□ 0.46
CTDSP1-208ENST00000482272 ZNF526Q8TF50 670 aaPredicted RBP17.9■□□□□ 0.46
CTDSP1-208ENST00000482272 ARFGEF1Q9Y6D6 1849 aa17.9■□□□□ 0.46
CTDSP1-208ENST00000482272 BCORQ6W2J9 1755 aa17.89■□□□□ 0.45
CTDSP1-208ENST00000482272 PRAMEF22A3QJZ6 481 aa17.89■□□□□ 0.45
CTDSP1-208ENST00000482272 HTATSF1O43719 755 aaKnown RBP17.89■□□□□ 0.45
CTDSP1-208ENST00000482272 SERPINB2P05120 415 aa17.89■□□□□ 0.45
CTDSP1-208ENST00000482272 IL6STP40189 918 aaPredicted RBP17.89■□□□□ 0.45
CTDSP1-208ENST00000482272 IFFO2Q5TF58 517 aa17.89■□□□□ 0.45
CTDSP1-208ENST00000482272 ZNF330Q9Y3S2 320 aaPredicted RBP17.88■□□□□ 0.45
CTDSP1-208ENST00000482272 KDM3BQ7LBC6 1761 aa17.88■□□□□ 0.45
CTDSP1-208ENST00000482272 DLEC1Q9Y238 1755 aa17.88■□□□□ 0.45
CTDSP1-208ENST00000482272 ANKRD31Q8N7Z5 1873 aa17.87■□□□□ 0.45
CTDSP1-208ENST00000482272 CHRNA5P30532 468 aa17.87■□□□□ 0.45
CTDSP1-208ENST00000482272 PLEKHF1Q96S99 279 aa17.87■□□□□ 0.45
CTDSP1-208ENST00000482272 CARMIL3Q8ND23 1372 aa17.87■□□□□ 0.45
CTDSP1-208ENST00000482272 A1BGP04217 495 aa17.86■□□□□ 0.45
CTDSP1-208ENST00000482272 BICDL1Q6ZP65 573 aa17.86■□□□□ 0.45
CTDSP1-208ENST00000482272 PNNQ9H307 717 aaKnown RBP17.86■□□□□ 0.45
CTDSP1-208ENST00000482272 TBC1D2BQ9UPU7 963 aa17.86■□□□□ 0.45
CTDSP1-208ENST00000482272 LAMB4A4D0S4 1761 aa17.85■□□□□ 0.45
CTDSP1-208ENST00000482272 PIP4K2AP48426 406 aaPredicted RBP17.85■□□□□ 0.45
CTDSP1-208ENST00000482272 USP16Q9Y5T5 823 aa17.85■□□□□ 0.45
CTDSP1-208ENST00000482272 COL11A2P13942 1736 aaPredicted RBP17.84■□□□□ 0.45
CTDSP1-208ENST00000482272 SNRPA1P09661 255 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-208ENST00000482272 TAF7Q15545 349 aaPredicted RBP17.84■□□□□ 0.45
CTDSP1-208ENST00000482272 TBC1D9BQ66K14 1250 aa17.83■□□□□ 0.44
CTDSP1-208ENST00000482272 H0YIN7 160 aa17.82■□□□□ 0.44
CTDSP1-208ENST00000482272 MIS18AQ9NYP9 233 aa17.82■□□□□ 0.44
CTDSP1-208ENST00000482272 PDZRN3Q9UPQ7 1066 aa17.82■□□□□ 0.44
CTDSP1-208ENST00000482272 DDX10Q13206 875 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-208ENST00000482272 C9orf131Q5VYM1 1079 aa17.81■□□□□ 0.44
CTDSP1-208ENST00000482272 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-208ENST00000482272 C2CD5Q86YS7 1000 aa17.81■□□□□ 0.44
CTDSP1-208ENST00000482272 TTLL6Q8N841 843 aa17.81■□□□□ 0.44
CTDSP1-208ENST00000482272 PNISRQ8TF01 805 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-208ENST00000482272 SETDB2Q96T68 719 aa17.81■□□□□ 0.44
CTDSP1-208ENST00000482272 THUMPD2Q9BTF0 503 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-208ENST00000482272 PDE6BP35913 854 aa17.8■□□□□ 0.44
CTDSP1-208ENST00000482272 RALBP1Q15311 655 aa17.8■□□□□ 0.44
CTDSP1-208ENST00000482272 KIF3CO14782 793 aa17.79■□□□□ 0.44
CTDSP1-208ENST00000482272 NPHP1O15259 732 aa17.79■□□□□ 0.44
CTDSP1-208ENST00000482272 CAMTA2O94983 1202 aa17.79■□□□□ 0.44
CTDSP1-208ENST00000482272 BRIP1Q9BX63 1249 aa17.79■□□□□ 0.44
CTDSP1-208ENST00000482272 SBF1O95248 1867 aa17.79■□□□□ 0.44
CTDSP1-208ENST00000482272 MAPK8IP3Q9UPT6 1336 aa17.78■□□□□ 0.44
CTDSP1-208ENST00000482272 NBPF26B4DH59 902 aa17.78■□□□□ 0.44
CTDSP1-208ENST00000482272 NBPF10Q6P3W6 841 aaKnown RBP17.78■□□□□ 0.44
CTDSP1-208ENST00000482272 CLEC4GQ6UXB4 293 aa17.78■□□□□ 0.44
CTDSP1-208ENST00000482272 CCDC24Q8N4L8 307 aa17.78■□□□□ 0.44
CTDSP1-208ENST00000482272 NBPF15Q8N660 670 aa17.78■□□□□ 0.44
CTDSP1-208ENST00000482272 NFE2L2Q16236 605 aa17.77■□□□□ 0.44
CTDSP1-208ENST00000482272 PRR5LQ6MZQ0 368 aa17.77■□□□□ 0.44
CTDSP1-208ENST00000482272 RNF181Q9P0P0 153 aa17.77■□□□□ 0.44
CTDSP1-208ENST00000482272 ZNF652Q9Y2D9 606 aa17.77■□□□□ 0.44
CTDSP1-208ENST00000482272 CACNA1SQ13698 1873 aa17.76■□□□□ 0.43
CTDSP1-208ENST00000482272 ZNF622Q969S3 477 aaKnown RBP eCLIP17.76■□□□□ 0.43
CTDSP1-208ENST00000482272 TOMM70O94826 608 aa17.75■□□□□ 0.43
CTDSP1-208ENST00000482272 PRELPP51888 382 aa17.75■□□□□ 0.43
CTDSP1-208ENST00000482272 ST5P78524 1137 aa17.75■□□□□ 0.43
CTDSP1-208ENST00000482272 CNBD1Q8NA66 436 aa17.75■□□□□ 0.43
CTDSP1-208ENST00000482272 KDM2BQ8NHM5 1336 aa17.74■□□□□ 0.43
CTDSP1-208ENST00000482272 RGL2O15211 777 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms