RNA–Protein interactions for RNA: ENST00000482125.1

FXR1-216, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5

Gene FXR1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-216ENST00000482125 RFC4P35249 363 aa12.64□□□□□ -0.39
FXR1-216ENST00000482125 ATP6V1AP38606 617 aa12.64□□□□□ -0.39
FXR1-216ENST00000482125 FKBP8Q14318 412 aa12.64□□□□□ -0.39
FXR1-216ENST00000482125 USP31Q70CQ4 1352 aa12.64□□□□□ -0.39
FXR1-216ENST00000482125 OTUD5Q96G74 571 aa12.63□□□□□ -0.39
FXR1-216ENST00000482125 PRDM6Q9NQX0 595 aa12.63□□□□□ -0.39
FXR1-216ENST00000482125 TRAF5O00463 557 aa12.62□□□□□ -0.39
FXR1-216ENST00000482125 TAOK3Q9H2K8 898 aa12.62□□□□□ -0.39
FXR1-216ENST00000482125 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
FXR1-216ENST00000482125 RGPD2P0DJD1 1756 aa12.61□□□□□ -0.39
FXR1-216ENST00000482125 CD163L1Q9NR16 1453 aa12.61□□□□□ -0.39
FXR1-216ENST00000482125 KDRP35968 1356 aa12.61□□□□□ -0.39
FXR1-216ENST00000482125 NOGQ13253 232 aa12.61□□□□□ -0.39
FXR1-216ENST00000482125 PKN2Q16513 984 aaKnown RBP12.61□□□□□ -0.39
FXR1-216ENST00000482125 LTV1Q96GA3 475 aaPredicted RBP12.61□□□□□ -0.39
FXR1-216ENST00000482125 SCN11AQ9UI33 1791 aa12.61□□□□□ -0.39
FXR1-216ENST00000482125 CGNL1Q0VF96 1302 aa12.61□□□□□ -0.39
FXR1-216ENST00000482125 RNF123Q5XPI4 1314 aa12.61□□□□□ -0.39
FXR1-216ENST00000482125 NRXN2Q9P2S2 1712 aa12.6□□□□□ -0.39
FXR1-216ENST00000482125 RPS6KA4O75676 772 aa12.6□□□□□ -0.39
FXR1-216ENST00000482125 TM4SF1P30408 202 aa12.6□□□□□ -0.39
FXR1-216ENST00000482125 AKAP4Q5JQC9 854 aa12.6□□□□□ -0.39
FXR1-216ENST00000482125 RC3H1Q5TC82 1133 aaKnown RBP12.6□□□□□ -0.39
FXR1-216ENST00000482125 IP6K1Q92551 441 aa12.6□□□□□ -0.39
FXR1-216ENST00000482125 SRP68Q9UHB9 627 aaKnown RBP12.6□□□□□ -0.39
FXR1-216ENST00000482125 PCDH11XQ9BZA7 1347 aa12.6□□□□□ -0.39
FXR1-216ENST00000482125 PCDH11YQ9BZA8 1340 aa12.6□□□□□ -0.39
FXR1-216ENST00000482125 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
FXR1-216ENST00000482125 C21orf2O43822 256 aa12.59□□□□□ -0.39
FXR1-216ENST00000482125 ZNF692Q9BU19 519 aaPredicted RBP12.59□□□□□ -0.39
FXR1-216ENST00000482125 CNTNAP4Q9C0A0 1308 aa12.59□□□□□ -0.39
FXR1-216ENST00000482125 USP42Q9H9J4 1324 aaKnown RBP12.59□□□□□ -0.39
FXR1-216ENST00000482125 ZNF831Q5JPB2 1677 aa12.58□□□□□ -0.4
FXR1-216ENST00000482125 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
FXR1-216ENST00000482125 CYP27B1O15528 508 aa12.58□□□□□ -0.4
FXR1-216ENST00000482125 C2CD5Q86YS7 1000 aa12.58□□□□□ -0.4
FXR1-216ENST00000482125 ASAP1Q9ULH1 1129 aa12.58□□□□□ -0.4
FXR1-216ENST00000482125 MAP3K19Q56UN5 1328 aa12.58□□□□□ -0.4
FXR1-216ENST00000482125 BRCA2P51587 3418 aa12.58□□□□□ -0.4
FXR1-216ENST00000482125 SLC4A9Q96Q91 983 aa12.57□□□□□ -0.4
FXR1-216ENST00000482125 RNF186Q9NXI6 227 aa12.57□□□□□ -0.4
FXR1-216ENST00000482125 MYH14Q7Z406 1995 aaKnown RBP12.57□□□□□ -0.4
FXR1-216ENST00000482125 CACNA1AO00555 2505 aa12.57□□□□□ -0.4
FXR1-216ENST00000482125 SPTBN5Q9NRC6 3674 aaKnown RBP12.56□□□□□ -0.4
FXR1-216ENST00000482125 VCANP13611 3396 aa12.56□□□□□ -0.4
FXR1-216ENST00000482125 TRPA1O75762 1119 aa12.56□□□□□ -0.4
FXR1-216ENST00000482125 HTTP42858 3142 aa12.55□□□□□ -0.4
FXR1-216ENST00000482125 POTEFA5A3E0 1075 aa12.55□□□□□ -0.4
FXR1-216ENST00000482125 COL9A1P20849 921 aa12.55□□□□□ -0.4
FXR1-216ENST00000482125 CARMIL3Q8ND23 1372 aa12.55□□□□□ -0.4
FXR1-216ENST00000482125 RBBP6Q7Z6E9 1792 aaKnown RBP12.54□□□□□ -0.4
FXR1-216ENST00000482125 H0YIN7 160 aa12.54□□□□□ -0.4
FXR1-216ENST00000482125 CELF2O95319 508 aaKnown RBP12.54□□□□□ -0.4
FXR1-216ENST00000482125 PLA2G5P39877 138 aa12.54□□□□□ -0.4
FXR1-216ENST00000482125 FBXO46Q6PJ61 603 aaPredicted RBP12.53□□□□□ -0.4
FXR1-216ENST00000482125 CHRDL2Q6WN34 429 aa12.53□□□□□ -0.4
FXR1-216ENST00000482125 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
FXR1-216ENST00000482125 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
FXR1-216ENST00000482125 MON2Q7Z3U7 1717 aa12.53□□□□□ -0.4
FXR1-216ENST00000482125 KIAA0100Q14667 2235 aaKnown RBP12.52□□□□□ -0.41
FXR1-216ENST00000482125 PAPPA2Q9BXP8 1791 aa12.52□□□□□ -0.41
FXR1-216ENST00000482125 FAM155AB1AL88 458 aaPredicted RBP12.52□□□□□ -0.41
FXR1-216ENST00000482125 H0YGN5 161 aa12.52□□□□□ -0.41
FXR1-216ENST00000482125 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
FXR1-216ENST00000482125 NKX1-1Q15270 411 aaPredicted RBP12.52□□□□□ -0.41
FXR1-216ENST00000482125 NBPF6Q5VWK0 638 aa12.52□□□□□ -0.41
FXR1-216ENST00000482125 NME9Q86XW9 330 aa12.52□□□□□ -0.41
FXR1-216ENST00000482125 RAPGEF4Q8WZA2 1011 aa12.52□□□□□ -0.41
FXR1-216ENST00000482125 NBPF4Q96M43 638 aa12.52□□□□□ -0.41
FXR1-216ENST00000482125 MPHOSPH9Q99550 1183 aa12.52□□□□□ -0.41
FXR1-216ENST00000482125 KTN1Q86UP2 1357 aaKnown RBP12.52□□□□□ -0.41
FXR1-216ENST00000482125 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
FXR1-216ENST00000482125 BICDL1Q6ZP65 573 aa12.51□□□□□ -0.41
FXR1-216ENST00000482125 KDM2AQ9Y2K7 1162 aa12.51□□□□□ -0.41
FXR1-216ENST00000482125 AKAP11Q9UKA4 1901 aa12.5□□□□□ -0.41
FXR1-216ENST00000482125 TATP17735 454 aaPredicted RBP12.5□□□□□ -0.41
FXR1-216ENST00000482125 KIF23Q02241 960 aaPredicted RBP12.5□□□□□ -0.41
FXR1-216ENST00000482125 GPC2Q8N158 579 aa12.5□□□□□ -0.41
FXR1-216ENST00000482125 SYNE4Q8N205 404 aa12.5□□□□□ -0.41
FXR1-216ENST00000482125 USHBP1Q8N6Y0 703 aa12.5□□□□□ -0.41
FXR1-216ENST00000482125 TMOD3Q9NYL9 352 aa12.5□□□□□ -0.41
FXR1-216ENST00000482125 LAMA3Q16787 3333 aa12.5□□□□□ -0.41
FXR1-216ENST00000482125 ANKRD31Q8N7Z5 1873 aa12.49□□□□□ -0.41
FXR1-216ENST00000482125 ERBB4Q15303 1308 aa12.49□□□□□ -0.41
FXR1-216ENST00000482125 NFIXQ14938 502 aa12.49□□□□□ -0.41
FXR1-216ENST00000482125 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.49□□□□□ -0.41
FXR1-216ENST00000482125 CENPJQ9HC77 1338 aaPredicted RBP12.48□□□□□ -0.41
FXR1-216ENST00000482125 FZD9O00144 591 aa12.48□□□□□ -0.41
FXR1-216ENST00000482125 HOXC9P31274 260 aa12.48□□□□□ -0.41
FXR1-216ENST00000482125 ZNF622Q969S3 477 aaKnown RBP eCLIP12.48□□□□□ -0.41
FXR1-216ENST00000482125 RAPGEFL1Q9UHV5 662 aa12.48□□□□□ -0.41
FXR1-216ENST00000482125 SLX4Q8IY92 1834 aa12.48□□□□□ -0.41
FXR1-216ENST00000482125 BCORQ6W2J9 1755 aa12.48□□□□□ -0.41
FXR1-216ENST00000482125 TTC28Q96AY4 2481 aa12.48□□□□□ -0.41
FXR1-216ENST00000482125 SERPINB2P05120 415 aa12.47□□□□□ -0.41
FXR1-216ENST00000482125 DCAF11Q8TEB1 546 aa12.47□□□□□ -0.41
FXR1-216ENST00000482125 PRO3102Q9H379 93 aa12.47□□□□□ -0.41
FXR1-216ENST00000482125 HDAC9Q9UKV0 1011 aa12.47□□□□□ -0.41
FXR1-216ENST00000482125 SBNO2Q9Y2G9 1366 aa12.46□□□□□ -0.41
FXR1-216ENST00000482125 EPS15P42566 896 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms